Protein–RNA interactions for Protein: Q99231

TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR3Q99231 FSF1YOR271C 984 nt11.21□□□□□ -0.62
TY1B-DR3Q99231 AGX1YFL030W 1158 nt11.2□□□□□ -0.62
TY1B-DR3Q99231 PSD1YNL169C 1503 nt11.19□□□□□ -0.62
TY1B-DR3Q99231 YDR215CYDR215C 414 nt11.19□□□□□ -0.62
TY1B-DR3Q99231 HTZ1YOL012C 405 nt11.19□□□□□ -0.62
TY1B-DR3Q99231 HOC1YJR075W 1191 nt11.18□□□□□ -0.62
TY1B-DR3Q99231 GET4YOR164C 939 nt11.18□□□□□ -0.62
TY1B-DR3Q99231 MPE1YKL059C 1326 nt11.17□□□□□ -0.62
TY1B-DR3Q99231 YIL029W-AYIL029W-A 372 nt11.17□□□□□ -0.62
TY1B-DR3Q99231 YJL213WYJL213W 996 nt11.17□□□□□ -0.62
TY1B-DR3Q99231 CDA1YLR307W 906 nt11.17□□□□□ -0.62
TY1B-DR3Q99231 YMR252CYMR252C 405 nt11.17□□□□□ -0.62
TY1B-DR3Q99231 YOL046CYOL046C 675 nt11.17□□□□□ -0.62
TY1B-DR3Q99231 YEL075W-AYEL075W-A 612 nt11.16□□□□□ -0.62
TY1B-DR3Q99231 YLR463CYLR463C 552 nt11.16□□□□□ -0.62
TY1B-DR3Q99231 RIM8YGL045W 1629 nt11.15□□□□□ -0.62
TY1B-DR3Q99231 TUB1YML085C 1344 nt11.14□□□□□ -0.63
TY1B-DR3Q99231 PAM17YKR065C 594 nt11.13□□□□□ -0.63
TY1B-DR3Q99231 OSW2YLR054C 2175 nt11.13□□□□□ -0.63
TY1B-DR3Q99231 FMP40YPL222W 2067 nt11.11□□□□□ -0.63
TY1B-DR3Q99231 HSL7YBR133C 2484 nt11.11□□□□□ -0.63
TY1B-DR3Q99231 FTH1YBR207W 1398 nt11.1□□□□□ -0.63
TY1B-DR3Q99231 RTC4YNL254C 1206 nt11.1□□□□□ -0.63
TY1B-DR3Q99231 YPR076WYPR076W 375 nt11.1□□□□□ -0.63
TY1B-DR3Q99231 KTR4YBR199W 1395 nt11.09□□□□□ -0.63
TY1B-DR3Q99231 ADE5,7YGL234W 2409 nt11.09□□□□□ -0.63
TY1B-DR3Q99231 COX15YER141W 1461 nt11.08□□□□□ -0.64
TY1B-DR3Q99231 YNL140CYNL140C 570 nt11.08□□□□□ -0.64
TY1B-DR3Q99231 FIT2YOR382W 462 nt11.07□□□□□ -0.64
TY1B-DR3Q99231 CIT2YCR005C 1383 nt11.06□□□□□ -0.64
TY1B-DR3Q99231 FYV1YDR024W 486 nt11.06□□□□□ -0.64
TY1B-DR3Q99231 ASR1YPR093C 867 nt11.06□□□□□ -0.64
TY1B-DR3Q99231 MED6YHR058C 888 nt11.05□□□□□ -0.64
TY1B-DR3Q99231 PLB2YMR006C 2121 nt11.05□□□□□ -0.64
TY1B-DR3Q99231 YNR001W-AYNR001W-A 219 nt11.04□□□□□ -0.64
TY1B-DR3Q99231 RCF2YNR018W 675 nt11.04□□□□□ -0.64
TY1B-DR3Q99231 LEO1YOR123C 1395 nt11.04□□□□□ -0.64
TY1B-DR3Q99231 APE4YHR113W 1473 nt11.03□□□□□ -0.64
TY1B-DR3Q99231 ASF1YJL115W 840 nt11.03□□□□□ -0.64
TY1B-DR3Q99231 YKL147CYKL147C 618 nt11.03□□□□□ -0.64
TY1B-DR3Q99231 YGL114WYGL114W 2178 nt11.03□□□□□ -0.64
TY1B-DR3Q99231 YKL102CYKL102C 306 nt11.03□□□□□ -0.64
TY1B-DR3Q99231 ADH5YBR145W 1056 nt11.03□□□□□ -0.64
TY1B-DR3Q99231 PPH21YDL134C 1110 nt11.02□□□□□ -0.65
TY1B-DR3Q99231 IRC7YFR055W 1023 nt11.02□□□□□ -0.65
TY1B-DR3Q99231 YDL144CYDL144C 1071 nt11.01□□□□□ -0.65
TY1B-DR3Q99231 RBS1YDL189W 1374 nt11□□□□□ -0.65
TY1B-DR3Q99231 PET10YKR046C 852 nt10.99□□□□□ -0.65
TY1B-DR3Q99231 YPL102CYPL102C 303 nt10.99□□□□□ -0.65
TY1B-DR3Q99231 TOP3YLR234W 1971 nt10.99□□□□□ -0.65
TY1B-DR3Q99231 COQ3YOL096C 939 nt10.98□□□□□ -0.65
TY1B-DR3Q99231 MRPS18YNL306W 654 nt10.97□□□□□ -0.65
TY1B-DR3Q99231 NTG2YOL043C 1143 nt10.97□□□□□ -0.65
TY1B-DR3Q99231 YKR045CYKR045C 552 nt10.96□□□□□ -0.65
TY1B-DR3Q99231 YLR361C-AYLR361C-A 297 nt10.96□□□□□ -0.65
TY1B-DR3Q99231 CAR2YLR438W 1275 nt10.96□□□□□ -0.65
TY1B-DR3Q99231 YML018CYML018C 1182 nt10.96□□□□□ -0.65
TY1B-DR3Q99231 TPO4YOR273C 1980 nt10.96□□□□□ -0.66
TY1B-DR3Q99231 CYT1YOR065W 930 nt10.95□□□□□ -0.66
TY1B-DR3Q99231 CDC1YDR182W 1476 nt10.94□□□□□ -0.66
TY1B-DR3Q99231 SUF3tG(CCC)D 72 nt10.93□□□□□ -0.66
TY1B-DR3Q99231 PRE3YJL001W 648 nt10.93□□□□□ -0.66
TY1B-DR3Q99231 URA8YJR103W 1737 nt10.92□□□□□ -0.66
TY1B-DR3Q99231 YCR049CYCR049C 447 nt10.92□□□□□ -0.66
TY1B-DR3Q99231 YIP4YGL198W 708 nt10.92□□□□□ -0.66
TY1B-DR3Q99231 YAH1YPL252C 519 nt10.91□□□□□ -0.66
TY1B-DR3Q99231 SAL1YNL083W 1485 nt10.91□□□□□ -0.66
TY1B-DR3Q99231 AVL9YLR114C 2295 nt10.9□□□□□ -0.66
TY1B-DR3Q99231 YDR187CYDR187C 519 nt10.9□□□□□ -0.67
TY1B-DR3Q99231 YLL058WYLL058W 1728 nt10.89□□□□□ -0.67
TY1B-DR3Q99231 PET117YER058W 324 nt10.89□□□□□ -0.67
TY1B-DR3Q99231 CKB1YGL019W 837 nt10.89□□□□□ -0.67
TY1B-DR3Q99231 TAF9YMR236W 474 nt10.89□□□□□ -0.67
TY1B-DR3Q99231 BRN1YBL097W 2265 nt10.89□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)BtD(GUC)B 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)DtD(GUC)D 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)G1tD(GUC)G1 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)G2tD(GUC)G2 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)I1tD(GUC)I1 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)I2tD(GUC)I2 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)J1tD(GUC)J1 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)J2tD(GUC)J2 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)J3tD(GUC)J3 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)J4tD(GUC)J4 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)KtD(GUC)K 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)L1tD(GUC)L1 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)L2tD(GUC)L2 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)MtD(GUC)M 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 tD(GUC)OtD(GUC)O 72 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 YNL092WYNL092W 1203 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 YBR113WYBR113W 483 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 YPQ2YDR352W 954 nt10.88□□□□□ -0.67
TY1B-DR3Q99231 PEX28YHR150W 1740 nt10.87□□□□□ -0.67
TY1B-DR3Q99231 YMR295CYMR295C 594 nt10.87□□□□□ -0.67
TY1B-DR3Q99231 ADE16YLR028C 1776 nt10.87□□□□□ -0.67
TY1B-DR3Q99231 TFG2YGR005C 1203 nt10.86□□□□□ -0.67
TY1B-DR3Q99231 snR4snR4 186 nt10.86□□□□□ -0.67
TY1B-DR3Q99231 RDR1YOR380W 1641 nt10.86□□□□□ -0.67
TY1B-DR3Q99231 FPR3YML074C 1236 nt10.85□□□□□ -0.67
TY1B-DR3Q99231 PDC5YLR134W 1692 nt10.85□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms