Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.25■■■□□ 2.59
SNED1Q8TER0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.24■■■□□ 2.59
SNED1Q8TER0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNED1Q8TER0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNED1Q8TER0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SNED1Q8TER0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.24■■■□□ 2.59
SNED1Q8TER0 AC009831.1-201ENST00000580420 1582 ntBASIC31.23■■■□□ 2.59
SNED1Q8TER0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SNED1Q8TER0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.23■■■□□ 2.59
SNED1Q8TER0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
SNED1Q8TER0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.23■■■□□ 2.59
SNED1Q8TER0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SNED1Q8TER0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SNED1Q8TER0 AL592293.1-201ENST00000502889 1188 ntBASIC31.22■■■□□ 2.59
SNED1Q8TER0 AC126177.7-201ENST00000547904 679 ntBASIC31.22■■■□□ 2.59
SNED1Q8TER0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SNED1Q8TER0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
SNED1Q8TER0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.19■■■□□ 2.58
SNED1Q8TER0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SNED1Q8TER0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SNED1Q8TER0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.18■■■□□ 2.58
SNED1Q8TER0 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.18■■■□□ 2.58
SNED1Q8TER0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.18■■■□□ 2.58
SNED1Q8TER0 AL451085.2-201ENST00000605085 799 ntBASIC31.17■■■□□ 2.58
SNED1Q8TER0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SNED1Q8TER0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
SNED1Q8TER0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SNED1Q8TER0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
SNED1Q8TER0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
SNED1Q8TER0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SNED1Q8TER0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
SNED1Q8TER0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.16■■■□□ 2.58
SNED1Q8TER0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.16■■■□□ 2.58
SNED1Q8TER0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SNED1Q8TER0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
SNED1Q8TER0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SNED1Q8TER0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SNED1Q8TER0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.15■■■□□ 2.58
SNED1Q8TER0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.15■■■□□ 2.58
SNED1Q8TER0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SNED1Q8TER0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.14■■■□□ 2.58
SNED1Q8TER0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SNED1Q8TER0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.14■■■□□ 2.58
SNED1Q8TER0 AL035685.1-201ENST00000636663 812 ntBASIC31.14■■■□□ 2.58
SNED1Q8TER0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.13■■■□□ 2.57
SNED1Q8TER0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
SNED1Q8TER0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
SNED1Q8TER0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SNED1Q8TER0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.12■■■□□ 2.57
SNED1Q8TER0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SNED1Q8TER0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.11■■■□□ 2.57
SNED1Q8TER0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SNED1Q8TER0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SNED1Q8TER0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SNED1Q8TER0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SNED1Q8TER0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.09■■■□□ 2.57
SNED1Q8TER0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SNED1Q8TER0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.08■■■□□ 2.57
SNED1Q8TER0 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.08■■■□□ 2.57
SNED1Q8TER0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SNED1Q8TER0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SNED1Q8TER0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.57
SNED1Q8TER0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.57
SNED1Q8TER0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.07■■■□□ 2.57
SNED1Q8TER0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
SNED1Q8TER0 AC025884.2-201ENST00000553429 711 ntBASIC31.07■■■□□ 2.57
SNED1Q8TER0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SNED1Q8TER0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.07■■■□□ 2.56
SNED1Q8TER0 DUX4L18-201ENST00000553347 1267 ntBASIC31.07■■■□□ 2.56
SNED1Q8TER0 AC133552.2-201ENST00000619106 1032 ntBASIC31.07■■■□□ 2.56
SNED1Q8TER0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.06■■■□□ 2.56
SNED1Q8TER0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
SNED1Q8TER0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
SNED1Q8TER0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.05■■■□□ 2.56
SNED1Q8TER0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNED1Q8TER0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SNED1Q8TER0 AC026202.3-201ENST00000600805 1127 ntBASIC31.05■■■□□ 2.56
SNED1Q8TER0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
SNED1Q8TER0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
SNED1Q8TER0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.03■■■□□ 2.56
SNED1Q8TER0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.03■■■□□ 2.56
SNED1Q8TER0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
SNED1Q8TER0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.02■■■□□ 2.56
SNED1Q8TER0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.02■■■□□ 2.56
SNED1Q8TER0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.56
SNED1Q8TER0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
SNED1Q8TER0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
SNED1Q8TER0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31■■■□□ 2.55
SNED1Q8TER0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
SNED1Q8TER0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
SNED1Q8TER0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SNED1Q8TER0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31■■■□□ 2.55
SNED1Q8TER0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SNED1Q8TER0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
SNED1Q8TER0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
SNED1Q8TER0 DUX4L9-201ENST00000449051 1259 ntBASIC30.99■■■□□ 2.55
SNED1Q8TER0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SNED1Q8TER0 SPCS2P3-201ENST00000500401 656 ntBASIC30.98■■■□□ 2.55
SNED1Q8TER0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SNED1Q8TER0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.97■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms