Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS13BQ7Z7G8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VPS13BQ7Z7G8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS13BQ7Z7G8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
VPS13BQ7Z7G8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS13BQ7Z7G8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VPS13BQ7Z7G8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 AL592293.1-201ENST00000502889 1188 ntBASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 MIR219A2-201ENST00000608502 1504 ntBASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 AC110285.7-201ENST00000624417 1536 ntBASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.77■□□□□ 0.11
VPS13BQ7Z7G8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.77■□□□□ 0.11
VPS13BQ7Z7G8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC15.77■□□□□ 0.11
VPS13BQ7Z7G8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
VPS13BQ7Z7G8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VPS13BQ7Z7G8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS13BQ7Z7G8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS13BQ7Z7G8 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.76■□□□□ 0.11
VPS13BQ7Z7G8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS13BQ7Z7G8 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS13BQ7Z7G8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13BQ7Z7G8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13BQ7Z7G8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13BQ7Z7G8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.75■□□□□ 0.11
VPS13BQ7Z7G8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 AC009299.2-201ENST00000482477 511 ntBASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS13BQ7Z7G8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS13BQ7Z7G8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS13BQ7Z7G8 ECEL1P2-201ENST00000461596 1295 ntBASIC15.73■□□□□ 0.11
VPS13BQ7Z7G8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS13BQ7Z7G8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 RP9P-202ENST00000450133 1212 ntBASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 DUX4L18-201ENST00000553347 1267 ntBASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
VPS13BQ7Z7G8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS13BQ7Z7G8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.71■□□□□ 0.11
VPS13BQ7Z7G8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS13BQ7Z7G8 AC009831.1-201ENST00000580420 1582 ntBASIC15.71■□□□□ 0.1
VPS13BQ7Z7G8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
VPS13BQ7Z7G8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 ST7-AS1-201ENST00000456775 1889 ntBASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 THA1P-201ENST00000590384 1145 ntBASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms