Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPUSD3Q6P087 AC018358.1-201ENST00000631079 1402 ntBASIC23.05■■□□□ 1.28
RPUSD3Q6P087 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPUSD3Q6P087 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPUSD3Q6P087 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.04■■□□□ 1.28
RPUSD3Q6P087 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPUSD3Q6P087 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RPUSD3Q6P087 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPUSD3Q6P087 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.03■■□□□ 1.28
RPUSD3Q6P087 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPUSD3Q6P087 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RPUSD3Q6P087 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RPUSD3Q6P087 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.03■■□□□ 1.28
RPUSD3Q6P087 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.03■■□□□ 1.28
RPUSD3Q6P087 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPUSD3Q6P087 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPUSD3Q6P087 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPUSD3Q6P087 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RPUSD3Q6P087 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RPUSD3Q6P087 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RPUSD3Q6P087 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RPUSD3Q6P087 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPUSD3Q6P087 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPUSD3Q6P087 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPUSD3Q6P087 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPUSD3Q6P087 AL033527.3-201ENST00000566366 1196 ntBASIC23■■□□□ 1.27
RPUSD3Q6P087 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23■■□□□ 1.27
RPUSD3Q6P087 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPUSD3Q6P087 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RPUSD3Q6P087 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.98■■□□□ 1.27
RPUSD3Q6P087 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RPUSD3Q6P087 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPUSD3Q6P087 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.98■■□□□ 1.27
RPUSD3Q6P087 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPUSD3Q6P087 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.98■■□□□ 1.27
RPUSD3Q6P087 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPUSD3Q6P087 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RPUSD3Q6P087 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPUSD3Q6P087 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPUSD3Q6P087 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPUSD3Q6P087 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPUSD3Q6P087 KRT18P60-201ENST00000312876 1297 ntBASIC22.96■■□□□ 1.27
RPUSD3Q6P087 TSPY13P-201ENST00000338964 914 ntBASIC22.96■■□□□ 1.27
RPUSD3Q6P087 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.96■■□□□ 1.27
RPUSD3Q6P087 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPUSD3Q6P087 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.96■■□□□ 1.27
RPUSD3Q6P087 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RPUSD3Q6P087 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RPUSD3Q6P087 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.95■■□□□ 1.26
RPUSD3Q6P087 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPUSD3Q6P087 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPUSD3Q6P087 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPUSD3Q6P087 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RPUSD3Q6P087 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPUSD3Q6P087 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.94■■□□□ 1.26
RPUSD3Q6P087 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.94■■□□□ 1.26
RPUSD3Q6P087 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
RPUSD3Q6P087 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPUSD3Q6P087 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RPUSD3Q6P087 AL157400.5-201ENST00000507624 621 ntBASIC22.93■■□□□ 1.26
RPUSD3Q6P087 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RPUSD3Q6P087 ST7-AS1-201ENST00000456775 1889 ntBASIC22.93■■□□□ 1.26
RPUSD3Q6P087 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.92■■□□□ 1.26
RPUSD3Q6P087 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.92■■□□□ 1.26
RPUSD3Q6P087 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.92■■□□□ 1.26
RPUSD3Q6P087 AC004987.1-201ENST00000428627 508 ntBASIC22.92■■□□□ 1.26
RPUSD3Q6P087 ATP5G2P3-201ENST00000429083 425 ntBASIC22.92■■□□□ 1.26
RPUSD3Q6P087 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.92■■□□□ 1.26
RPUSD3Q6P087 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.92■■□□□ 1.26
RPUSD3Q6P087 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPUSD3Q6P087 ABCB10P3-201ENST00000561950 2166 ntBASIC22.91■■□□□ 1.26
RPUSD3Q6P087 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPUSD3Q6P087 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.91■■□□□ 1.26
RPUSD3Q6P087 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPUSD3Q6P087 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPUSD3Q6P087 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPUSD3Q6P087 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.9■■□□□ 1.26
RPUSD3Q6P087 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPUSD3Q6P087 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
RPUSD3Q6P087 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPUSD3Q6P087 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPUSD3Q6P087 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.89■■□□□ 1.25
RPUSD3Q6P087 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
RPUSD3Q6P087 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RPUSD3Q6P087 AC007029.1-201ENST00000604183 313 ntBASIC22.89■■□□□ 1.25
RPUSD3Q6P087 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RPUSD3Q6P087 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPUSD3Q6P087 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.87■■□□□ 1.25
RPUSD3Q6P087 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RPUSD3Q6P087 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.87■■□□□ 1.25
RPUSD3Q6P087 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
RPUSD3Q6P087 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.86■■□□□ 1.25
RPUSD3Q6P087 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RPUSD3Q6P087 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RPUSD3Q6P087 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.86■■□□□ 1.25
RPUSD3Q6P087 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RPUSD3Q6P087 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.86■■□□□ 1.25
RPUSD3Q6P087 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
RPUSD3Q6P087 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RPUSD3Q6P087 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms