Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 MBF1YOR298C-A 456 nt9.23□□□□□ -0.93
RTR1P40084 FIT1YDR534C 1587 nt9.23□□□□□ -0.93
RTR1P40084 YAH1YPL252C 519 nt9.22□□□□□ -0.93
RTR1P40084 YML122CYML122C 381 nt9.21□□□□□ -0.94
RTR1P40084 TPI1YDR050C 747 nt9.2□□□□□ -0.94
RTR1P40084 YJL213WYJL213W 996 nt9.19□□□□□ -0.94
RTR1P40084 LAT1YNL071W 1449 nt9.19□□□□□ -0.94
RTR1P40084 YRF1-1YDR545W 5391 nt9.18□□□□□ -0.94
RTR1P40084 YRF1-5YLR467W 5391 nt9.18□□□□□ -0.94
RTR1P40084 YRF1-8YOR396W 5391 nt9.18□□□□□ -0.94
RTR1P40084 TCB1YOR086C 3561 nt9.17□□□□□ -0.94
RTR1P40084 CST26YBR042C 1194 nt9.17□□□□□ -0.94
RTR1P40084 RTC2YBR147W 891 nt9.17□□□□□ -0.94
RTR1P40084 AFG3YER017C 2286 nt9.17□□□□□ -0.94
RTR1P40084 TRR2YHR106W 1029 nt9.16□□□□□ -0.94
RTR1P40084 YOX1YML027W 1158 nt9.16□□□□□ -0.94
RTR1P40084 COS10YNR075W 1125 nt9.16□□□□□ -0.94
RTR1P40084 PAM17YKR065C 594 nt9.15□□□□□ -0.94
RTR1P40084 DCR2YLR361C 1737 nt9.14□□□□□ -0.95
RTR1P40084 PDA1YER178W 1263 nt9.14□□□□□ -0.95
RTR1P40084 PRS4YBL068W 981 nt9.14□□□□□ -0.95
RTR1P40084 ERG24YNL280C 1317 nt9.13□□□□□ -0.95
RTR1P40084 YGL260WYGL260W 231 nt9.12□□□□□ -0.95
RTR1P40084 UFD1YGR048W 1086 nt9.11□□□□□ -0.95
RTR1P40084 CIT2YCR005C 1383 nt9.11□□□□□ -0.95
RTR1P40084 NFS1YCL017C 1494 nt9.1□□□□□ -0.95
RTR1P40084 YDR327WYDR327W 327 nt9.1□□□□□ -0.95
RTR1P40084 YLR030WYLR030W 792 nt9.1□□□□□ -0.95
RTR1P40084 YPL264CYPL264C 1062 nt9.1□□□□□ -0.95
RTR1P40084 HXT9YJL219W 1704 nt9.1□□□□□ -0.95
RTR1P40084 RDR1YOR380W 1641 nt9.09□□□□□ -0.95
RTR1P40084 GNA1YFL017C 480 nt9.09□□□□□ -0.95
RTR1P40084 snR30snR30 606 nt9.09□□□□□ -0.95
RTR1P40084 NAF1YNL124W 1479 nt9.08□□□□□ -0.96
RTR1P40084 DML1YMR211W 1428 nt9.08□□□□□ -0.96
RTR1P40084 RTC4YNL254C 1206 nt9.08□□□□□ -0.96
RTR1P40084 YOR041CYOR041C 432 nt9.08□□□□□ -0.96
RTR1P40084 GID7YCL039W 2238 nt9.07□□□□□ -0.96
RTR1P40084 YPQ2YDR352W 954 nt9.07□□□□□ -0.96
RTR1P40084 PET117YER058W 324 nt9.07□□□□□ -0.96
RTR1P40084 AIM46YHR199C 933 nt9.07□□□□□ -0.96
RTR1P40084 YKL147CYKL147C 618 nt9.07□□□□□ -0.96
RTR1P40084 ZIM17YNL310C 525 nt9.06□□□□□ -0.96
RTR1P40084 YPR130CYPR130C 408 nt9.06□□□□□ -0.96
RTR1P40084 TOP3YLR234W 1971 nt9.06□□□□□ -0.96
RTR1P40084 URA1YKL216W 945 nt9.05□□□□□ -0.96
RTR1P40084 YER152CYER152C 1332 nt9.05□□□□□ -0.96
RTR1P40084 SUF3tG(CCC)D 72 nt9.04□□□□□ -0.96
RTR1P40084 YMR074CYMR074C 438 nt9.04□□□□□ -0.96
RTR1P40084 LIP5YOR196C 1245 nt9.04□□□□□ -0.96
RTR1P40084 DMC1YER179W 1005 nt9.03□□□□□ -0.96
RTR1P40084 DPM1YPR183W 804 nt9.03□□□□□ -0.96
RTR1P40084 MAL31YBR298C 1845 nt9.03□□□□□ -0.96
RTR1P40084 CDC7YDL017W 1524 nt9.02□□□□□ -0.97
RTR1P40084 MCP1YOR228C 909 nt9.02□□□□□ -0.97
RTR1P40084 MSS51YLR203C 1311 nt9.02□□□□□ -0.97
RTR1P40084 TUB1YML085C 1344 nt9.02□□□□□ -0.97
RTR1P40084 PGI1YBR196C 1665 nt9□□□□□ -0.97
RTR1P40084 ERG27YLR100W 1044 nt9□□□□□ -0.97
RTR1P40084 YCL049CYCL049C 939 nt9□□□□□ -0.97
RTR1P40084 CDC23YHR166C 1881 nt9□□□□□ -0.97
RTR1P40084 GTS1YGL181W 1191 nt8.99□□□□□ -0.97
RTR1P40084 YLR162WYLR162W 357 nt8.99□□□□□ -0.97
RTR1P40084 MPE1YKL059C 1326 nt8.99□□□□□ -0.97
RTR1P40084 GET4YOR164C 939 nt8.98□□□□□ -0.97
RTR1P40084 CIA1YDR267C 993 nt8.97□□□□□ -0.97
RTR1P40084 PLB2YMR006C 2121 nt8.97□□□□□ -0.97
RTR1P40084 YJL144WYJL144W 315 nt8.96□□□□□ -0.98
RTR1P40084 SML1YML058W 315 nt8.96□□□□□ -0.98
RTR1P40084 LGE1YPL055C 999 nt8.95□□□□□ -0.98
RTR1P40084 SPE3YPR069C 882 nt8.94□□□□□ -0.98
RTR1P40084 FLC2YAL053W 2352 nt8.94□□□□□ -0.98
RTR1P40084 PRC1YMR297W 1599 nt8.94□□□□□ -0.98
RTR1P40084 PUS4YNL292W 1212 nt8.93□□□□□ -0.98
RTR1P40084 URA8YJR103W 1737 nt8.93□□□□□ -0.98
RTR1P40084 YNR001W-AYNR001W-A 219 nt8.92□□□□□ -0.98
RTR1P40084 RPL43AYPR043W 279 nt8.92□□□□□ -0.98
RTR1P40084 BRN1YBL097W 2265 nt8.91□□□□□ -0.98
RTR1P40084 EXG2YDR261C 1689 nt8.91□□□□□ -0.98
RTR1P40084 BEM1YBR200W 1656 nt8.91□□□□□ -0.98
RTR1P40084 ERR3YMR323W 1314 nt8.89□□□□□ -0.99
RTR1P40084 SPE4YLR146C 903 nt8.89□□□□□ -0.99
RTR1P40084 AIM34YMR003W 597 nt8.89□□□□□ -0.99
RTR1P40084 AAD14YNL331C 1131 nt8.89□□□□□ -0.99
RTR1P40084 HTZ1YOL012C 405 nt8.89□□□□□ -0.99
RTR1P40084 MPH3YJR160C 1809 nt8.89□□□□□ -0.99
RTR1P40084 NUP57YGR119C 1626 nt8.88□□□□□ -0.99
RTR1P40084 YCR049CYCR049C 447 nt8.88□□□□□ -0.99
RTR1P40084 ERG10YPL028W 1197 nt8.88□□□□□ -0.99
RTR1P40084 RMD8YFR048W 1989 nt8.88□□□□□ -0.99
RTR1P40084 BIO3YNR058W 1443 nt8.88□□□□□ -0.99
RTR1P40084 YKR018CYKR018C 2178 nt8.88□□□□□ -0.99
RTR1P40084 YNR005CYNR005C 405 nt8.87□□□□□ -0.99
RTR1P40084 FCY2YER056C 1602 nt8.87□□□□□ -0.99
RTR1P40084 ITR1YDR497C 1755 nt8.86□□□□□ -0.99
RTR1P40084 CAN1YEL063C 1773 nt8.86□□□□□ -0.99
RTR1P40084 APE4YHR113W 1473 nt8.86□□□□□ -0.99
RTR1P40084 PHO85YPL031C 918 nt8.86□□□□□ -0.99
RTR1P40084 YJL163CYJL163C 1668 nt8.85□□□□□ -0.99
RTR1P40084 LDB7YBL006C 543 nt8.85□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 22.6 ms