Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBCP0CG48 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBCP0CG48 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBCP0CG48 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.96■■□□□ 1.11
UBCP0CG48 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
UBCP0CG48 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBCP0CG48 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
UBCP0CG48 DUX4L28-201ENST00000623687 678 ntBASIC21.95■■□□□ 1.1
UBCP0CG48 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.95■■□□□ 1.1
UBCP0CG48 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBCP0CG48 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
UBCP0CG48 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBCP0CG48 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBCP0CG48 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UBCP0CG48 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBCP0CG48 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBCP0CG48 MIR3665-201ENST00000578708 105 ntBASIC21.93■■□□□ 1.1
UBCP0CG48 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.92■■□□□ 1.1
UBCP0CG48 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBCP0CG48 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBCP0CG48 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBCP0CG48 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.91■■□□□ 1.1
UBCP0CG48 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBCP0CG48 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBCP0CG48 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
UBCP0CG48 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
UBCP0CG48 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UBCP0CG48 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UBCP0CG48 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.89■■□□□ 1.09
UBCP0CG48 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBCP0CG48 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UBCP0CG48 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBCP0CG48 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBCP0CG48 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
UBCP0CG48 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
UBCP0CG48 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
UBCP0CG48 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBCP0CG48 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
UBCP0CG48 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
UBCP0CG48 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.87■■□□□ 1.09
UBCP0CG48 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBCP0CG48 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.87■■□□□ 1.09
UBCP0CG48 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
UBCP0CG48 AP006261.1-201ENST00000584783 668 ntBASIC21.87■■□□□ 1.09
UBCP0CG48 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBCP0CG48 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBCP0CG48 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
UBCP0CG48 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBCP0CG48 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
UBCP0CG48 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBCP0CG48 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.85■■□□□ 1.09
UBCP0CG48 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.85■■□□□ 1.09
UBCP0CG48 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.85■■□□□ 1.09
UBCP0CG48 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.85■■□□□ 1.09
UBCP0CG48 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.84■■□□□ 1.09
UBCP0CG48 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.84■■□□□ 1.09
UBCP0CG48 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
UBCP0CG48 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
UBCP0CG48 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.83■■□□□ 1.08
UBCP0CG48 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.83■■□□□ 1.08
UBCP0CG48 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBCP0CG48 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
UBCP0CG48 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBCP0CG48 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.82■■□□□ 1.08
UBCP0CG48 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBCP0CG48 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
UBCP0CG48 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UBCP0CG48 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.81■■□□□ 1.08
UBCP0CG48 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBCP0CG48 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBCP0CG48 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBCP0CG48 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBCP0CG48 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBCP0CG48 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBCP0CG48 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.8■■□□□ 1.08
UBCP0CG48 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBCP0CG48 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
UBCP0CG48 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.8■■□□□ 1.08
UBCP0CG48 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBCP0CG48 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBCP0CG48 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBCP0CG48 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
UBCP0CG48 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.79■■□□□ 1.08
UBCP0CG48 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.78■■□□□ 1.08
UBCP0CG48 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBCP0CG48 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBCP0CG48 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBCP0CG48 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
UBCP0CG48 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBCP0CG48 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
UBCP0CG48 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.77■■□□□ 1.08
UBCP0CG48 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UBCP0CG48 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBCP0CG48 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
UBCP0CG48 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.76■■□□□ 1.07
UBCP0CG48 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.76■■□□□ 1.07
UBCP0CG48 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.76■■□□□ 1.07
UBCP0CG48 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBCP0CG48 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
UBCP0CG48 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms