Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
HFM1A2PYH4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC37.82■■■■□ 3.64
HFM1A2PYH4 AC139426.1-201ENST00000568218 2529 ntBASIC37.82■■■■□ 3.64
HFM1A2PYH4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
HFM1A2PYH4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC37.81■■■■□ 3.64
HFM1A2PYH4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
HFM1A2PYH4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
HFM1A2PYH4 ABHD17AP3-201ENST00000503096 1137 ntBASIC37.81■■■■□ 3.64
HFM1A2PYH4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC37.81■■■■□ 3.64
HFM1A2PYH4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
HFM1A2PYH4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
HFM1A2PYH4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
HFM1A2PYH4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
HFM1A2PYH4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
HFM1A2PYH4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC37.79■■■■□ 3.64
HFM1A2PYH4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC37.78■■■■□ 3.64
HFM1A2PYH4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC37.78■■■■□ 3.64
HFM1A2PYH4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC37.77■■■■□ 3.64
HFM1A2PYH4 AC018358.1-201ENST00000631079 1402 ntBASIC37.77■■■■□ 3.64
HFM1A2PYH4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
HFM1A2PYH4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC37.76■■■■□ 3.63
HFM1A2PYH4 DRD5P2-201ENST00000421395 2012 ntBASIC37.76■■■■□ 3.63
HFM1A2PYH4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
HFM1A2PYH4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
HFM1A2PYH4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC37.75■■■■□ 3.63
HFM1A2PYH4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
HFM1A2PYH4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
HFM1A2PYH4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC37.74■■■■□ 3.63
HFM1A2PYH4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC37.74■■■■□ 3.63
HFM1A2PYH4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC37.74■■■■□ 3.63
HFM1A2PYH4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC37.74■■■■□ 3.63
HFM1A2PYH4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
HFM1A2PYH4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC37.73■■■■□ 3.63
HFM1A2PYH4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC37.73■■■■□ 3.63
HFM1A2PYH4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
HFM1A2PYH4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
HFM1A2PYH4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC37.72■■■■□ 3.63
HFM1A2PYH4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC37.72■■■■□ 3.63
HFM1A2PYH4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
HFM1A2PYH4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
HFM1A2PYH4 MED25-210ENST00000612854 801 ntTSL 5 BASIC37.71■■■■□ 3.63
HFM1A2PYH4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
HFM1A2PYH4 MED25-214ENST00000622402 642 ntTSL 5 BASIC37.71■■■■□ 3.63
HFM1A2PYH4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
HFM1A2PYH4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
HFM1A2PYH4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
HFM1A2PYH4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC37.7■■■■□ 3.63
HFM1A2PYH4 AC060814.1-201ENST00000554326 538 ntBASIC37.69■■■■□ 3.62
HFM1A2PYH4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC37.69■■■■□ 3.62
HFM1A2PYH4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC37.69■■■■□ 3.62
HFM1A2PYH4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC37.68■■■■□ 3.62
HFM1A2PYH4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC37.68■■■■□ 3.62
HFM1A2PYH4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC37.68■■■■□ 3.62
HFM1A2PYH4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC37.67■■■■□ 3.62
HFM1A2PYH4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC37.67■■■■□ 3.62
HFM1A2PYH4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
HFM1A2PYH4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC37.66■■■■□ 3.62
HFM1A2PYH4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
HFM1A2PYH4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
HFM1A2PYH4 GPX1-201ENST00000419349 1106 ntBASIC37.66■■■■□ 3.62
HFM1A2PYH4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
HFM1A2PYH4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC37.66■■■■□ 3.62
HFM1A2PYH4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
HFM1A2PYH4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC37.65■■■■□ 3.62
HFM1A2PYH4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
HFM1A2PYH4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC37.64■■■■□ 3.62
HFM1A2PYH4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC37.62■■■■□ 3.61
HFM1A2PYH4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC37.62■■■■□ 3.61
HFM1A2PYH4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC37.61■■■■□ 3.61
HFM1A2PYH4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC37.61■■■■□ 3.61
HFM1A2PYH4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC37.6■■■■□ 3.61
HFM1A2PYH4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
HFM1A2PYH4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
HFM1A2PYH4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC37.6■■■■□ 3.61
HFM1A2PYH4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
HFM1A2PYH4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC37.58■■■■□ 3.61
HFM1A2PYH4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC37.58■■■■□ 3.61
HFM1A2PYH4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC37.58■■■■□ 3.61
HFM1A2PYH4 AL157400.5-201ENST00000507624 621 ntBASIC37.56■■■■□ 3.6
HFM1A2PYH4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC37.56■■■■□ 3.6
HFM1A2PYH4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC37.56■■■■□ 3.6
HFM1A2PYH4 AC092296.2-201ENST00000589470 999 ntBASIC37.56■■■■□ 3.6
HFM1A2PYH4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC37.56■■■■□ 3.6
HFM1A2PYH4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
HFM1A2PYH4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC37.55■■■■□ 3.6
HFM1A2PYH4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC37.54■■■■□ 3.6
HFM1A2PYH4 RARRES2P2-201ENST00000394842 485 ntBASIC37.54■■■■□ 3.6
HFM1A2PYH4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
HFM1A2PYH4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC37.54■■■■□ 3.6
HFM1A2PYH4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
HFM1A2PYH4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC37.53■■■■□ 3.6
HFM1A2PYH4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC37.53■■■■□ 3.6
HFM1A2PYH4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC37.53■■■■□ 3.6
HFM1A2PYH4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms