Protein–RNA interactions for Protein: A0A0B4J1J3

Igkv8-18, Immunoglobulin kappa variable 8-18 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-18A0A0B4J1J3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Igkv8-18A0A0B4J1J3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-18A0A0B4J1J3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.17■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-18A0A0B4J1J3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv8-18A0A0B4J1J3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.14■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.14■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Gm8109-201ENSMUST00000194076 746 ntBASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-18A0A0B4J1J3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Gm16148-201ENSMUST00000119653 893 ntBASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Igkv8-18A0A0B4J1J3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv8-18A0A0B4J1J3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv8-18A0A0B4J1J3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv8-18A0A0B4J1J3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.07■□□□□ 0
Igkv8-18A0A0B4J1J3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv8-18A0A0B4J1J3 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.07■□□□□ 0
Igkv8-18A0A0B4J1J3 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.07■□□□□ 0
Igkv8-18A0A0B4J1J3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Igkv8-18A0A0B4J1J3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv8-18A0A0B4J1J3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv8-18A0A0B4J1J3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv8-18A0A0B4J1J3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv8-18A0A0B4J1J3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv8-18A0A0B4J1J3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Igkv8-18A0A0B4J1J3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv8-18A0A0B4J1J3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv8-18A0A0B4J1J3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Igkv8-18A0A0B4J1J3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Igkv8-18A0A0B4J1J3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Igkv8-18A0A0B4J1J3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Igkv8-18A0A0B4J1J3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Igkv8-18A0A0B4J1J3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Igkv8-18A0A0B4J1J3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms