RNA–Protein interactions for RNA: ENST00000641761.1

CCDC196-211, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-211ENST00000641761 AEBP2Q6ZN18 517 aaPredicted RBP16.93■□□□□ 0.3
CCDC196-211ENST00000641761 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
CCDC196-211ENST00000641761 PHF23Q9BUL5 403 aaPredicted RBP14.62□□□□□ -0.07
CCDC196-211ENST00000641761 SENP3Q9H4L4 574 aaPredicted RBP14.22□□□□□ -0.13
CCDC196-211ENST00000641761 PLPPR3Q6T4P5 718 aa13.5□□□□□ -0.25
CCDC196-211ENST00000641761 FOXD1Q16676 465 aa13.4□□□□□ -0.26
CCDC196-211ENST00000641761 POTEDQ86YR6 584 aa13.02□□□□□ -0.32
CCDC196-211ENST00000641761 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
CCDC196-211ENST00000641761 ADRA2BP18089 450 aa12.85□□□□□ -0.35
CCDC196-211ENST00000641761 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
CCDC196-211ENST00000641761 MSH5O43196 834 aa12.35□□□□□ -0.43
CCDC196-211ENST00000641761 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
CCDC196-211ENST00000641761 KCNA4P22459 653 aa11.86□□□□□ -0.51
CCDC196-211ENST00000641761 SCAF1Q9H7N4 1312 aaKnown RBP11.68□□□□□ -0.54
CCDC196-211ENST00000641761 MAPK8IP2Q13387 824 aaPredicted RBP11.63□□□□□ -0.55
CCDC196-211ENST00000641761 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
CCDC196-211ENST00000641761 SLC24A1O60721 1099 aa11.6□□□□□ -0.55
CCDC196-211ENST00000641761 CNKSR2Q8WXI2 1034 aa11.54□□□□□ -0.56
CCDC196-211ENST00000641761 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
CCDC196-211ENST00000641761 DMRT2Q9Y5R5 561 aa11.39□□□□□ -0.59
CCDC196-211ENST00000641761 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
CCDC196-211ENST00000641761 SLC4A1APQ9BWU0 796 aaKnown RBP11.3□□□□□ -0.6
CCDC196-211ENST00000641761 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
CCDC196-211ENST00000641761 HOXD11P31277 338 aaPredicted RBP11.2□□□□□ -0.62
CCDC196-211ENST00000641761 EHMT2Q96KQ7 1210 aa11.19□□□□□ -0.62
CCDC196-211ENST00000641761 DNAJC5BQ9UF47 199 aa11.09□□□□□ -0.63
CCDC196-211ENST00000641761 CSRNP3Q8WYN3 585 aa10.97□□□□□ -0.65
CCDC196-211ENST00000641761 ZBTB22O15209 634 aa10.93□□□□□ -0.66
CCDC196-211ENST00000641761 DCAF8L1A6NGE4 600 aa10.91□□□□□ -0.66
CCDC196-211ENST00000641761 CACNB1Q02641 598 aaPredicted RBP10.86□□□□□ -0.67
CCDC196-211ENST00000641761 SLC4A2P04920 1241 aa10.84□□□□□ -0.67
CCDC196-211ENST00000641761 FOXD4L1Q9NU39 408 aa10.84□□□□□ -0.67
CCDC196-211ENST00000641761 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
CCDC196-211ENST00000641761 MYT1Q01538 1121 aa10.7□□□□□ -0.7
CCDC196-211ENST00000641761 TTBK1Q5TCY1 1321 aaPredicted RBP10.7□□□□□ -0.7
CCDC196-211ENST00000641761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCDC196-211ENST00000641761 RNF39Q9H2S5 420 aa10.65□□□□□ -0.7
CCDC196-211ENST00000641761 MYCNP04198 464 aaPredicted RBP10.61□□□□□ -0.71
CCDC196-211ENST00000641761 U3KPZ7 1027 aaPredicted RBP10.55□□□□□ -0.72
CCDC196-211ENST00000641761 PELP1Q8IZL8 1130 aaKnown RBP10.45□□□□□ -0.74
CCDC196-211ENST00000641761 ATXN8OSP0DMR3 200 aa10.41□□□□□ -0.74
CCDC196-211ENST00000641761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.4□□□□□ -0.74
CCDC196-211ENST00000641761 C1QBPQ07021 282 aaKnown RBP10.4□□□□□ -0.74
CCDC196-211ENST00000641761 HNRNPUL2Q1KMD3 747 aaKnown RBP10.4□□□□□ -0.74
CCDC196-211ENST00000641761 SAMD1Q6SPF0 538 aaPredicted RBP10.39□□□□□ -0.75
CCDC196-211ENST00000641761 APLP2Q06481 763 aa10.36□□□□□ -0.75
CCDC196-211ENST00000641761 ATF5Q9Y2D1 282 aaPredicted RBP10.36□□□□□ -0.75
CCDC196-211ENST00000641761 ERICH6Q7L0X2 663 aa10.28□□□□□ -0.76
CCDC196-211ENST00000641761 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
CCDC196-211ENST00000641761 SPINK5Q9NQ38 1064 aaPredicted RBP10.23□□□□□ -0.77
CCDC196-211ENST00000641761 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
CCDC196-211ENST00000641761 AMER1Q5JTC6 1135 aaPredicted RBP10.17□□□□□ -0.78
CCDC196-211ENST00000641761 CAPN15O75808 1086 aa10.15□□□□□ -0.78
CCDC196-211ENST00000641761 TRHP20396 242 aaPredicted RBP10.15□□□□□ -0.78
CCDC196-211ENST00000641761 ZNF219Q9P2Y4 722 aaPredicted RBP10.15□□□□□ -0.78
CCDC196-211ENST00000641761 POTEHQ6S545 545 aa10.1□□□□□ -0.79
CCDC196-211ENST00000641761 ARXQ96QS3 562 aa10.1□□□□□ -0.79
CCDC196-211ENST00000641761 CCDC180Q9P1Z9 1646 aa10.08□□□□□ -0.8
CCDC196-211ENST00000641761 POLA2Q14181 598 aa10.01□□□□□ -0.81
CCDC196-211ENST00000641761 ABCB7O75027 752 aa10□□□□□ -0.81
CCDC196-211ENST00000641761 DSG3P32926 999 aa10□□□□□ -0.81
CCDC196-211ENST00000641761 ABCC9O60706 1549 aa9.99□□□□□ -0.81
CCDC196-211ENST00000641761 MKRN4PQ13434 485 aaPredicted RBP9.91□□□□□ -0.82
CCDC196-211ENST00000641761 FKBP8Q14318 412 aa9.91□□□□□ -0.82
CCDC196-211ENST00000641761 FBLN2P98095 1184 aa9.86□□□□□ -0.83
CCDC196-211ENST00000641761 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
CCDC196-211ENST00000641761 ZBTB12Q9Y330 459 aaPredicted RBP9.81□□□□□ -0.84
CCDC196-211ENST00000641761 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
CCDC196-211ENST00000641761 SPDYE4A6NLX3 237 aa9.73□□□□□ -0.85
CCDC196-211ENST00000641761 HOMEZQ8IX15 550 aa9.71□□□□□ -0.85
CCDC196-211ENST00000641761 OSCARQ8IYS5 282 aa9.69□□□□□ -0.86
CCDC196-211ENST00000641761 EIF5BO60841 1220 aaKnown RBP9.64□□□□□ -0.87
CCDC196-211ENST00000641761 TAOK2Q9UL54 1235 aa9.63□□□□□ -0.87
CCDC196-211ENST00000641761 TULP1O00294 542 aaPredicted RBP9.6□□□□□ -0.87
CCDC196-211ENST00000641761 PROM2Q8N271 834 aa9.59□□□□□ -0.88
CCDC196-211ENST00000641761 ZNF692Q9BU19 519 aaPredicted RBP9.59□□□□□ -0.88
CCDC196-211ENST00000641761 SPDYE2BA6NHP3 402 aa9.57□□□□□ -0.88
CCDC196-211ENST00000641761 SPDYE6P0CI01 402 aa9.57□□□□□ -0.88
CCDC196-211ENST00000641761 SPDYE2Q495Y8 402 aa9.57□□□□□ -0.88
CCDC196-211ENST00000641761 BCANQ96GW7 911 aa9.55□□□□□ -0.88
CCDC196-211ENST00000641761 SSUH2Q9Y2M2 353 aa9.54□□□□□ -0.88
CCDC196-211ENST00000641761 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
CCDC196-211ENST00000641761 DCAF8L2P0C7V8 631 aa9.52□□□□□ -0.89
CCDC196-211ENST00000641761 NACADO15069 1562 aa9.49□□□□□ -0.89
CCDC196-211ENST00000641761 PABPN1Q86U42 306 aaKnown RBP eCLIP9.47□□□□□ -0.89
CCDC196-211ENST00000641761 KLHL34Q8N239 644 aa9.47□□□□□ -0.89
CCDC196-211ENST00000641761 FBXO3Q9UK99 471 aa9.46□□□□□ -0.9
CCDC196-211ENST00000641761 RBM42Q9BTD8 480 aaKnown RBP9.43□□□□□ -0.9
CCDC196-211ENST00000641761 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
CCDC196-211ENST00000641761 ZCCHC6Q5VYS8 1495 aaKnown RBP9.41□□□□□ -0.9
CCDC196-211ENST00000641761 TPRNQ4KMQ1 711 aa9.4□□□□□ -0.91
CCDC196-211ENST00000641761 MYO15BQ96JP2 1530 aa9.39□□□□□ -0.91
CCDC196-211ENST00000641761 GTF3C3Q9Y5Q9 886 aa9.37□□□□□ -0.91
CCDC196-211ENST00000641761 VASPP50552 380 aaPredicted RBP9.36□□□□□ -0.91
CCDC196-211ENST00000641761 AKT1S1Q96B36 256 aa9.36□□□□□ -0.91
CCDC196-211ENST00000641761 DCAF1Q9Y4B6 1507 aa9.33□□□□□ -0.92
CCDC196-211ENST00000641761 UNC13AQ9UPW8 1703 aa9.31□□□□□ -0.92
CCDC196-211ENST00000641761 REM2Q8IYK8 340 aaPredicted RBP9.3□□□□□ -0.92
CCDC196-211ENST00000641761 STAG3Q9UJ98 1225 aa9.3□□□□□ -0.92
CCDC196-211ENST00000641761 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms