RNA–Protein interactions for RNA: ENST00000640461.1

KCNC1-212, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-212ENST00000640461 AEBP2Q6ZN18 517 aaPredicted RBP44.25■■■■■ 4.67
KCNC1-212ENST00000640461 CHIC1Q5VXU3 224 aa43.44■■■■■ 4.54
KCNC1-212ENST00000640461 PHF23Q9BUL5 403 aaPredicted RBP38.26■■■■□ 3.72
KCNC1-212ENST00000640461 SENP3Q9H4L4 574 aaPredicted RBP37.44■■■■□ 3.58
KCNC1-212ENST00000640461 PLPPR3Q6T4P5 718 aa35.36■■■■□ 3.25
KCNC1-212ENST00000640461 FOXD1Q16676 465 aa34.76■■■■□ 3.16
KCNC1-212ENST00000640461 PPP6R1Q9UPN7 881 aa33.68■■■□□ 2.98
KCNC1-212ENST00000640461 ADRA2BP18089 450 aa33.65■■■□□ 2.98
KCNC1-212ENST00000640461 PIAS4Q8N2W9 510 aaPredicted RBP32.82■■■□□ 2.84
KCNC1-212ENST00000640461 MSH5O43196 834 aa31.89■■■□□ 2.7
KCNC1-212ENST00000640461 PPP4R3CPQ6ZMV5 832 aa31.21■■■□□ 2.59
KCNC1-212ENST00000640461 KCNA4P22459 653 aa30.82■■■□□ 2.52
KCNC1-212ENST00000640461 SCAF1Q9H7N4 1312 aaKnown RBP30.7■■■□□ 2.5
KCNC1-212ENST00000640461 MAPK8IP2Q13387 824 aaPredicted RBP30.46■■■□□ 2.47
KCNC1-212ENST00000640461 NCBP3Q53F19 620 aaKnown RBP30.42■■■□□ 2.46
KCNC1-212ENST00000640461 CNKSR2Q8WXI2 1034 aa30.26■■■□□ 2.43
KCNC1-212ENST00000640461 NPM3O75607 178 aaKnown RBP30.04■■■□□ 2.4
KCNC1-212ENST00000640461 DMRT2Q9Y5R5 561 aa29.95■■■□□ 2.39
KCNC1-212ENST00000640461 RNF216Q9NWF9 866 aaPredicted RBP29.6■■■□□ 2.33
KCNC1-212ENST00000640461 HOXD11P31277 338 aaPredicted RBP29.43■■■□□ 2.3
KCNC1-212ENST00000640461 SLC4A1APQ9BWU0 796 aaKnown RBP29.37■■■□□ 2.29
KCNC1-212ENST00000640461 DNAJC5BQ9UF47 199 aa29.1■■■□□ 2.25
KCNC1-212ENST00000640461 EHMT2Q96KQ7 1210 aa28.87■■■□□ 2.21
KCNC1-212ENST00000640461 DCAF8L1A6NGE4 600 aa28.63■■■□□ 2.17
KCNC1-212ENST00000640461 POTEDQ86YR6 584 aa28.63■■■□□ 2.17
KCNC1-212ENST00000640461 CSRNP3Q8WYN3 585 aa28.42■■■□□ 2.14
KCNC1-212ENST00000640461 ZBTB22O15209 634 aa28.4■■■□□ 2.14
KCNC1-212ENST00000640461 SLC4A2P04920 1241 aa28.32■■■□□ 2.12
KCNC1-212ENST00000640461 FOXD4L1Q9NU39 408 aa28.26■■■□□ 2.11
KCNC1-212ENST00000640461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.03■■■□□ 2.08
KCNC1-212ENST00000640461 MYCNP04198 464 aaPredicted RBP27.72■■■□□ 2.03
KCNC1-212ENST00000640461 U3KPZ7 1027 aaPredicted RBP27.65■■■□□ 2.02
KCNC1-212ENST00000640461 RNF39Q9H2S5 420 aa27.39■■□□□ 1.98
KCNC1-212ENST00000640461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.31■■□□□ 1.96
KCNC1-212ENST00000640461 HNRNPUL2Q1KMD3 747 aaKnown RBP27.31■■□□□ 1.96
KCNC1-212ENST00000640461 SAMD1Q6SPF0 538 aaPredicted RBP27.25■■□□□ 1.95
KCNC1-212ENST00000640461 ATXN8OSP0DMR3 200 aa27.21■■□□□ 1.95
KCNC1-212ENST00000640461 C1QBPQ07021 282 aaKnown RBP27.05■■□□□ 1.92
KCNC1-212ENST00000640461 ATF5Q9Y2D1 282 aaPredicted RBP27.02■■□□□ 1.92
KCNC1-212ENST00000640461 APLP2Q06481 763 aa26.94■■□□□ 1.9
KCNC1-212ENST00000640461 SPINK5Q9NQ38 1064 aaPredicted RBP26.8■■□□□ 1.88
KCNC1-212ENST00000640461 CAPN15O75808 1086 aa26.65■■□□□ 1.86
KCNC1-212ENST00000640461 TRHP20396 242 aaPredicted RBP26.59■■□□□ 1.85
KCNC1-212ENST00000640461 ZNF219Q9P2Y4 722 aaPredicted RBP26.57■■□□□ 1.84
KCNC1-212ENST00000640461 CACNB1Q02641 598 aaPredicted RBP26.46■■□□□ 1.83
KCNC1-212ENST00000640461 POLA2Q14181 598 aa26.22■■□□□ 1.79
KCNC1-212ENST00000640461 ABCB7O75027 752 aa26.19■■□□□ 1.78
KCNC1-212ENST00000640461 DSG3P32926 999 aa26.16■■□□□ 1.78
KCNC1-212ENST00000640461 MKRN4PQ13434 485 aaPredicted RBP25.86■■□□□ 1.73
KCNC1-212ENST00000640461 FBLN2P98095 1184 aa25.79■■□□□ 1.72
KCNC1-212ENST00000640461 ZBTB12Q9Y330 459 aaPredicted RBP25.77■■□□□ 1.72
KCNC1-212ENST00000640461 FKBP8Q14318 412 aa25.66■■□□□ 1.7
KCNC1-212ENST00000640461 SPDYE4A6NLX3 237 aa25.36■■□□□ 1.65
KCNC1-212ENST00000640461 OSCARQ8IYS5 282 aa25.36■■□□□ 1.65
KCNC1-212ENST00000640461 SPDYE2BA6NHP3 402 aa25.12■■□□□ 1.61
KCNC1-212ENST00000640461 SPDYE6P0CI01 402 aa25.12■■□□□ 1.61
KCNC1-212ENST00000640461 SPDYE2Q495Y8 402 aa25.12■■□□□ 1.61
KCNC1-212ENST00000640461 ZNF692Q9BU19 519 aaPredicted RBP25.07■■□□□ 1.6
KCNC1-212ENST00000640461 PROM2Q8N271 834 aa25.01■■□□□ 1.59
KCNC1-212ENST00000640461 SSUH2Q9Y2M2 353 aa24.99■■□□□ 1.59
KCNC1-212ENST00000640461 RBM42Q9BTD8 480 aaKnown RBP24.86■■□□□ 1.57
KCNC1-212ENST00000640461 PABPN1Q86U42 306 aaKnown RBP eCLIP24.76■■□□□ 1.55
KCNC1-212ENST00000640461 AKT1S1Q96B36 256 aa24.64■■□□□ 1.54
KCNC1-212ENST00000640461 FBXO3Q9UK99 471 aa24.62■■□□□ 1.53
KCNC1-212ENST00000640461 REM2Q8IYK8 340 aaPredicted RBP24.42■■□□□ 1.5
KCNC1-212ENST00000640461 STAG3Q9UJ98 1225 aa24.35■■□□□ 1.49
KCNC1-212ENST00000640461 VASPP50552 380 aaPredicted RBP24.33■■□□□ 1.49
KCNC1-212ENST00000640461 SPDYE1Q8NFV5 336 aaPredicted RBP24.31■■□□□ 1.48
KCNC1-212ENST00000640461 CLEC11AQ9Y240 323 aa24.21■■□□□ 1.47
KCNC1-212ENST00000640461 PITPNM1O00562 1244 aa24.16■■□□□ 1.46
KCNC1-212ENST00000640461 IFNLR1Q8IU57 520 aaPredicted RBP24.03■■□□□ 1.44
KCNC1-212ENST00000640461 PRR29P0C7W0 189 aa24.01■■□□□ 1.43
KCNC1-212ENST00000640461 PLCD3Q8N3E9 789 aa24.01■■□□□ 1.43
KCNC1-212ENST00000640461 MIER1Q8N108 512 aa24■■□□□ 1.43
KCNC1-212ENST00000640461 PLEKHG5O94827 1062 aa23.82■■□□□ 1.4
KCNC1-212ENST00000640461 KLHL34Q8N239 644 aa23.82■■□□□ 1.4
KCNC1-212ENST00000640461 AMER1Q5JTC6 1135 aaPredicted RBP23.81■■□□□ 1.4
KCNC1-212ENST00000640461 RTN4Q9NQC3 1192 aaKnown RBP23.81■■□□□ 1.4
KCNC1-212ENST00000640461 CREBZFQ9NS37 354 aa23.81■■□□□ 1.4
KCNC1-212ENST00000640461 CHRDL2Q6WN34 429 aa23.76■■□□□ 1.39
KCNC1-212ENST00000640461 ZBTB47Q9UFB7 747 aaPredicted RBP23.68■■□□□ 1.38
KCNC1-212ENST00000640461 SPOCK2Q92563 424 aa23.67■■□□□ 1.38
KCNC1-212ENST00000640461 FXR2P51116 673 aaKnown RBP eCLIP23.64■■□□□ 1.37
KCNC1-212ENST00000640461 CHADLQ6NUI6 762 aa23.62■■□□□ 1.37
KCNC1-212ENST00000640461 MNX1P50219 401 aaPredicted RBP23.61■■□□□ 1.37
KCNC1-212ENST00000640461 PRKAR2AP13861 404 aaKnown RBP23.54■■□□□ 1.36
KCNC1-212ENST00000640461 PIP4P2Q8N4L2 257 aa23.54■■□□□ 1.36
KCNC1-212ENST00000640461 NUBP1P53384 320 aa23.41■■□□□ 1.34
KCNC1-212ENST00000640461 NISCHQ9Y2I1 1504 aa23.41■■□□□ 1.34
KCNC1-212ENST00000640461 FARP1Q9Y4F1 1045 aaPredicted RBP23.4■■□□□ 1.34
KCNC1-212ENST00000640461 NPM1P06748 294 aaKnown RBP eCLIP23.36■■□□□ 1.33
KCNC1-212ENST00000640461 PKD2Q13563 968 aa23.34■■□□□ 1.33
KCNC1-212ENST00000640461 CIZ1Q9ULV3 898 aaPredicted RBP23.26■■□□□ 1.31
KCNC1-212ENST00000640461 RASEFQ8IZ41 740 aa23.25■■□□□ 1.31
KCNC1-212ENST00000640461 FAM212AQ96EL1 285 aa23.17■■□□□ 1.3
KCNC1-212ENST00000640461 GSE1Q14687 1217 aa23.16■■□□□ 1.3
KCNC1-212ENST00000640461 DCAF8Q5TAQ9 597 aa23.16■■□□□ 1.3
KCNC1-212ENST00000640461 ECM2O94769 699 aaPredicted RBP23.1■■□□□ 1.29
KCNC1-212ENST00000640461 TSPYL2Q9H2G4 693 aaPredicted RBP23.03■■□□□ 1.28
KCNC1-212ENST00000640461 TRIM41Q8WV44 630 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms