RNA–Protein interactions for RNA: ENST00000639791.1

SPIN3-227, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,827 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-227ENST00000639791 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
SPIN3-227ENST00000639791 AEBP2Q6ZN18 517 aaPredicted RBP13.87□□□□□ -0.19
SPIN3-227ENST00000639791 PHF23Q9BUL5 403 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-227ENST00000639791 EHMT2Q96KQ7 1210 aa12.33□□□□□ -0.44
SPIN3-227ENST00000639791 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
SPIN3-227ENST00000639791 PLPPR3Q6T4P5 718 aa11.82□□□□□ -0.52
SPIN3-227ENST00000639791 KCNA4P22459 653 aa11.72□□□□□ -0.53
SPIN3-227ENST00000639791 NISCHQ9Y2I1 1504 aa11.71□□□□□ -0.53
SPIN3-227ENST00000639791 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
SPIN3-227ENST00000639791 RTN4Q9NQC3 1192 aaKnown RBP11.52□□□□□ -0.57
SPIN3-227ENST00000639791 ADRA2BP18089 450 aa11.34□□□□□ -0.59
SPIN3-227ENST00000639791 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
SPIN3-227ENST00000639791 SLC4A1APQ9BWU0 796 aaKnown RBP11.25□□□□□ -0.61
SPIN3-227ENST00000639791 SENP3Q9H4L4 574 aaPredicted RBP11.17□□□□□ -0.62
SPIN3-227ENST00000639791 PPP6R1Q9UPN7 881 aa11.03□□□□□ -0.64
SPIN3-227ENST00000639791 NCBP3Q53F19 620 aaKnown RBP10.92□□□□□ -0.66
SPIN3-227ENST00000639791 ZBTB22O15209 634 aa10.88□□□□□ -0.67
SPIN3-227ENST00000639791 PRKCSHP14314 528 aaPredicted RBP10.72□□□□□ -0.69
SPIN3-227ENST00000639791 FOXD1Q16676 465 aa10.63□□□□□ -0.71
SPIN3-227ENST00000639791 PPP4R3CPQ6ZMV5 832 aa10.61□□□□□ -0.71
SPIN3-227ENST00000639791 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
SPIN3-227ENST00000639791 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
SPIN3-227ENST00000639791 TAOK2Q9UL54 1235 aa10.48□□□□□ -0.73
SPIN3-227ENST00000639791 PLCB2Q00722 1185 aa10.43□□□□□ -0.74
SPIN3-227ENST00000639791 FKBP8Q14318 412 aa10.42□□□□□ -0.74
SPIN3-227ENST00000639791 BCANQ96GW7 911 aa10.42□□□□□ -0.74
SPIN3-227ENST00000639791 TIMELESSQ9UNS1 1208 aa10.35□□□□□ -0.75
SPIN3-227ENST00000639791 FOXD4L1Q9NU39 408 aa10.34□□□□□ -0.75
SPIN3-227ENST00000639791 TPRNQ4KMQ1 711 aa10.31□□□□□ -0.76
SPIN3-227ENST00000639791 HAP1P54257 671 aaPredicted RBP10.3□□□□□ -0.76
SPIN3-227ENST00000639791 SHROOM4Q9ULL8 1493 aa10.26□□□□□ -0.77
SPIN3-227ENST00000639791 ARXQ96QS3 562 aa10.25□□□□□ -0.77
SPIN3-227ENST00000639791 TULP1O00294 542 aaPredicted RBP10.21□□□□□ -0.77
SPIN3-227ENST00000639791 PIAS4Q8N2W9 510 aaPredicted RBP10.2□□□□□ -0.78
SPIN3-227ENST00000639791 SUPT5HO00267 1087 aaKnown RBP10.19□□□□□ -0.78
SPIN3-227ENST00000639791 HRCP23327 699 aa10.11□□□□□ -0.79
SPIN3-227ENST00000639791 VSIG10Q8N0Z9 540 aa10.06□□□□□ -0.8
SPIN3-227ENST00000639791 CNKSR2Q8WXI2 1034 aa10.01□□□□□ -0.81
SPIN3-227ENST00000639791 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
SPIN3-227ENST00000639791 GTF3C3Q9Y5Q9 886 aa9.98□□□□□ -0.81
SPIN3-227ENST00000639791 MYO15BQ96JP2 1530 aa9.98□□□□□ -0.81
SPIN3-227ENST00000639791 HOMEZQ8IX15 550 aa9.97□□□□□ -0.81
SPIN3-227ENST00000639791 PCGF6Q9BYE7 350 aa9.96□□□□□ -0.81
SPIN3-227ENST00000639791 ZCCHC6Q5VYS8 1495 aaKnown RBP9.95□□□□□ -0.82
SPIN3-227ENST00000639791 FBLN2P98095 1184 aa9.93□□□□□ -0.82
SPIN3-227ENST00000639791 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
SPIN3-227ENST00000639791 MAPK8IP2Q13387 824 aaPredicted RBP9.9□□□□□ -0.82
SPIN3-227ENST00000639791 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
SPIN3-227ENST00000639791 PPARGC1BQ86YN6 1023 aaKnown RBP9.87□□□□□ -0.83
SPIN3-227ENST00000639791 TMEM132AQ24JP5 1023 aa9.79□□□□□ -0.84
SPIN3-227ENST00000639791 DCAF1Q9Y4B6 1507 aa9.78□□□□□ -0.84
SPIN3-227ENST00000639791 CCDC180Q9P1Z9 1646 aa9.78□□□□□ -0.84
SPIN3-227ENST00000639791 ATXN8OSP0DMR3 200 aa9.78□□□□□ -0.84
SPIN3-227ENST00000639791 ERICH6Q7L0X2 663 aa9.75□□□□□ -0.85
SPIN3-227ENST00000639791 SLC4A2P04920 1241 aa9.73□□□□□ -0.85
SPIN3-227ENST00000639791 RANGAP1P46060 587 aaPredicted RBP9.73□□□□□ -0.85
SPIN3-227ENST00000639791 LOC105371045A0A1W2PR82 267 aa9.72□□□□□ -0.85
SPIN3-227ENST00000639791 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
SPIN3-227ENST00000639791 C14orf37Q86TY3 774 aa9.69□□□□□ -0.86
SPIN3-227ENST00000639791 TRIM26Q12899 539 aaPredicted RBP9.69□□□□□ -0.86
SPIN3-227ENST00000639791 PAXIP1Q6ZW49 1069 aaPredicted RBP9.67□□□□□ -0.86
SPIN3-227ENST00000639791 PKD2Q13563 968 aa9.67□□□□□ -0.86
SPIN3-227ENST00000639791 CFAP44Q96MT7 982 aa9.65□□□□□ -0.86
SPIN3-227ENST00000639791 MYCNP04198 464 aaPredicted RBP9.62□□□□□ -0.87
SPIN3-227ENST00000639791 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
SPIN3-227ENST00000639791 SCAF1Q9H7N4 1312 aaKnown RBP9.62□□□□□ -0.87
SPIN3-227ENST00000639791 NPM1P06748 294 aaKnown RBP eCLIP9.6□□□□□ -0.87
SPIN3-227ENST00000639791 BBXQ8WY36 941 aaPredicted RBP9.6□□□□□ -0.87
SPIN3-227ENST00000639791 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
SPIN3-227ENST00000639791 ZEB1P37275 1124 aaPredicted RBP9.59□□□□□ -0.87
SPIN3-227ENST00000639791 PELP1Q8IZL8 1130 aaKnown RBP9.59□□□□□ -0.87
SPIN3-227ENST00000639791 IFNLR1Q8IU57 520 aaPredicted RBP9.57□□□□□ -0.88
SPIN3-227ENST00000639791 FBXO3Q9UK99 471 aa9.57□□□□□ -0.88
SPIN3-227ENST00000639791 NBR1Q14596 966 aa9.56□□□□□ -0.88
SPIN3-227ENST00000639791 RNF216Q9NWF9 866 aaPredicted RBP9.55□□□□□ -0.88
SPIN3-227ENST00000639791 VASPP50552 380 aaPredicted RBP9.54□□□□□ -0.88
SPIN3-227ENST00000639791 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
SPIN3-227ENST00000639791 ATF5Q9Y2D1 282 aaPredicted RBP9.49□□□□□ -0.89
SPIN3-227ENST00000639791 TRIM41Q8WV44 630 aa9.46□□□□□ -0.9
SPIN3-227ENST00000639791 SPRYD3Q8NCJ5 442 aa9.43□□□□□ -0.9
SPIN3-227ENST00000639791 ABCC9O60706 1549 aa9.43□□□□□ -0.9
SPIN3-227ENST00000639791 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
SPIN3-227ENST00000639791 FAM9AQ8IZU1 332 aaPredicted RBP9.42□□□□□ -0.9
SPIN3-227ENST00000639791 DNAJC5Q9H3Z4 198 aa9.42□□□□□ -0.9
SPIN3-227ENST00000639791 RSF1Q96T23 1441 aaPredicted RBP9.39□□□□□ -0.91
SPIN3-227ENST00000639791 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
SPIN3-227ENST00000639791 ECM2O94769 699 aaPredicted RBP9.33□□□□□ -0.92
SPIN3-227ENST00000639791 APLP2Q06481 763 aa9.32□□□□□ -0.92
SPIN3-227ENST00000639791 RB1CC1Q8TDY2 1594 aa9.31□□□□□ -0.92
SPIN3-227ENST00000639791 SPDYE4A6NLX3 237 aa9.31□□□□□ -0.92
SPIN3-227ENST00000639791 PROM2Q8N271 834 aa9.31□□□□□ -0.92
SPIN3-227ENST00000639791 ACIN1Q9UKV3 1341 aaKnown RBP9.3□□□□□ -0.92
SPIN3-227ENST00000639791 RGL2O15211 777 aa9.3□□□□□ -0.92
SPIN3-227ENST00000639791 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
SPIN3-227ENST00000639791 CCER1Q8TC90 406 aaPredicted RBP9.28□□□□□ -0.92
SPIN3-227ENST00000639791 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.27□□□□□ -0.93
SPIN3-227ENST00000639791 NEUROD1Q13562 356 aa9.26□□□□□ -0.93
SPIN3-227ENST00000639791 HOXD11P31277 338 aaPredicted RBP9.24□□□□□ -0.93
SPIN3-227ENST00000639791 CENPBP07199 599 aaPredicted RBP9.23□□□□□ -0.93
SPIN3-227ENST00000639791 DIEXFQ68CQ4 756 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms