RNA–Protein interactions for RNA: ENST00000634315.1

DMD-232, Transcript of dystrophin, humanhuman

TSL 2

Gene DMD, Length 655 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-232ENST00000634315 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
DMD-232ENST00000634315 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
DMD-232ENST00000634315 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
DMD-232ENST00000634315 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
DMD-232ENST00000634315 FOXD1Q16676 465 aa15.32■□□□□ 0.04
DMD-232ENST00000634315 PLPPR3Q6T4P5 718 aa14.59□□□□□ -0.07
DMD-232ENST00000634315 MSH5O43196 834 aa14.36□□□□□ -0.11
DMD-232ENST00000634315 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
DMD-232ENST00000634315 PIAS4Q8N2W9 510 aaPredicted RBP14.23□□□□□ -0.13
DMD-232ENST00000634315 ADRA2BP18089 450 aa14.21□□□□□ -0.13
DMD-232ENST00000634315 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
DMD-232ENST00000634315 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
DMD-232ENST00000634315 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
DMD-232ENST00000634315 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
DMD-232ENST00000634315 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
DMD-232ENST00000634315 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
DMD-232ENST00000634315 CNKSR2Q8WXI2 1034 aa12.56□□□□□ -0.4
DMD-232ENST00000634315 RNF216Q9NWF9 866 aaPredicted RBP12.49□□□□□ -0.41
DMD-232ENST00000634315 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
DMD-232ENST00000634315 DCAF8L1A6NGE4 600 aa12.29□□□□□ -0.44
DMD-232ENST00000634315 RNF39Q9H2S5 420 aa12.28□□□□□ -0.44
DMD-232ENST00000634315 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
DMD-232ENST00000634315 CACNB1Q02641 598 aaPredicted RBP12.24□□□□□ -0.45
DMD-232ENST00000634315 C1QBPQ07021 282 aaKnown RBP12.11□□□□□ -0.47
DMD-232ENST00000634315 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
DMD-232ENST00000634315 KCNA4P22459 653 aa12.05□□□□□ -0.48
DMD-232ENST00000634315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.51
DMD-232ENST00000634315 U3KPZ7 1027 aaPredicted RBP11.69□□□□□ -0.54
DMD-232ENST00000634315 SLC4A2P04920 1241 aa11.6□□□□□ -0.55
DMD-232ENST00000634315 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
DMD-232ENST00000634315 DSG3P32926 999 aa11.47□□□□□ -0.57
DMD-232ENST00000634315 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
DMD-232ENST00000634315 CAPN15O75808 1086 aa11.39□□□□□ -0.59
DMD-232ENST00000634315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
DMD-232ENST00000634315 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
DMD-232ENST00000634315 APLP2Q06481 763 aa11.35□□□□□ -0.59
DMD-232ENST00000634315 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
DMD-232ENST00000634315 ZNF219Q9P2Y4 722 aaPredicted RBP11.28□□□□□ -0.6
DMD-232ENST00000634315 TRHP20396 242 aaPredicted RBP11.2□□□□□ -0.62
DMD-232ENST00000634315 MYCNP04198 464 aaPredicted RBP11.19□□□□□ -0.62
DMD-232ENST00000634315 ZBTB22O15209 634 aa11.12□□□□□ -0.63
DMD-232ENST00000634315 ABCB7O75027 752 aa11.11□□□□□ -0.63
DMD-232ENST00000634315 EHMT2Q96KQ7 1210 aa11.09□□□□□ -0.63
DMD-232ENST00000634315 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
DMD-232ENST00000634315 POTEHQ6S545 545 aa10.97□□□□□ -0.65
DMD-232ENST00000634315 CSRNP3Q8WYN3 585 aa10.97□□□□□ -0.65
DMD-232ENST00000634315 POLA2Q14181 598 aa10.96□□□□□ -0.65
DMD-232ENST00000634315 RBM42Q9BTD8 480 aaKnown RBP10.93□□□□□ -0.66
DMD-232ENST00000634315 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
DMD-232ENST00000634315 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
DMD-232ENST00000634315 ZBTB12Q9Y330 459 aaPredicted RBP10.79□□□□□ -0.68
DMD-232ENST00000634315 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
DMD-232ENST00000634315 CHRDL2Q6WN34 429 aa10.67□□□□□ -0.7
DMD-232ENST00000634315 OSCARQ8IYS5 282 aa10.58□□□□□ -0.72
DMD-232ENST00000634315 REM2Q8IYK8 340 aaPredicted RBP10.56□□□□□ -0.72
DMD-232ENST00000634315 SPDYE2BA6NHP3 402 aa10.47□□□□□ -0.73
DMD-232ENST00000634315 SPDYE6P0CI01 402 aa10.47□□□□□ -0.73
DMD-232ENST00000634315 SPDYE2Q495Y8 402 aa10.47□□□□□ -0.73
DMD-232ENST00000634315 FBLN2P98095 1184 aa10.45□□□□□ -0.74
DMD-232ENST00000634315 MKRN4PQ13434 485 aaPredicted RBP10.45□□□□□ -0.74
DMD-232ENST00000634315 PITPNM1O00562 1244 aa10.42□□□□□ -0.74
DMD-232ENST00000634315 FXR2P51116 673 aaKnown RBP eCLIP10.42□□□□□ -0.74
DMD-232ENST00000634315 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
DMD-232ENST00000634315 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
DMD-232ENST00000634315 SP7Q8TDD2 431 aaPredicted RBP10.29□□□□□ -0.76
DMD-232ENST00000634315 SPDYE1Q8NFV5 336 aaPredicted RBP10.26□□□□□ -0.77
DMD-232ENST00000634315 ZNF692Q9BU19 519 aaPredicted RBP10.26□□□□□ -0.77
DMD-232ENST00000634315 HAX1O00165 279 aa10.16□□□□□ -0.78
DMD-232ENST00000634315 PRKAR2AP13861 404 aaKnown RBP10.12□□□□□ -0.79
DMD-232ENST00000634315 EVX2Q03828 476 aa10.12□□□□□ -0.79
DMD-232ENST00000634315 PABPN1Q86U42 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
DMD-232ENST00000634315 CLEC11AQ9Y240 323 aa10.11□□□□□ -0.79
DMD-232ENST00000634315 C19orf67A6NJJ6 358 aa10.08□□□□□ -0.8
DMD-232ENST00000634315 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
DMD-232ENST00000634315 SLC24A1O60721 1099 aa9.96□□□□□ -0.82
DMD-232ENST00000634315 CHADLQ6NUI6 762 aa9.96□□□□□ -0.82
DMD-232ENST00000634315 SPDYE4A6NLX3 237 aa9.92□□□□□ -0.82
DMD-232ENST00000634315 FKBP8Q14318 412 aa9.91□□□□□ -0.82
DMD-232ENST00000634315 FARP1Q9Y4F1 1045 aaPredicted RBP9.9□□□□□ -0.82
DMD-232ENST00000634315 GABBR2O75899 941 aa9.89□□□□□ -0.83
DMD-232ENST00000634315 STAG3Q9UJ98 1225 aa9.89□□□□□ -0.83
DMD-232ENST00000634315 AMER1Q5JTC6 1135 aaPredicted RBP9.85□□□□□ -0.83
DMD-232ENST00000634315 CLCN6P51797 869 aa9.84□□□□□ -0.83
DMD-232ENST00000634315 CREBZFQ9NS37 354 aa9.84□□□□□ -0.83
DMD-232ENST00000634315 PROM2Q8N271 834 aa9.81□□□□□ -0.84
DMD-232ENST00000634315 RTN4Q9NQC3 1192 aaKnown RBP9.8□□□□□ -0.84
DMD-232ENST00000634315 CD44P16070 742 aaKnown RBP9.79□□□□□ -0.84
DMD-232ENST00000634315 NISCHQ9Y2I1 1504 aa9.74□□□□□ -0.85
DMD-232ENST00000634315 ZNF579Q8NAF0 562 aaKnown RBP9.74□□□□□ -0.85
DMD-232ENST00000634315 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
DMD-232ENST00000634315 POTEIP0CG38 1075 aa9.71□□□□□ -0.86
DMD-232ENST00000634315 ZRANB1Q9UGI0 708 aa9.64□□□□□ -0.87
DMD-232ENST00000634315 LHX8Q68G74 356 aa9.63□□□□□ -0.87
DMD-232ENST00000634315 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
DMD-232ENST00000634315 GALR2O43603 387 aaPredicted RBP9.55□□□□□ -0.88
DMD-232ENST00000634315 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
DMD-232ENST00000634315 DCBLD2Q96PD2 775 aa9.54□□□□□ -0.88
DMD-232ENST00000634315 PHF12Q96QT6 1004 aa9.5□□□□□ -0.89
DMD-232ENST00000634315 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
DMD-232ENST00000634315 CCDC61Q9Y6R9 512 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms