RNA–Protein interactions for RNA: ENST00000634285.1

DMD-231, Transcript of dystrophin, humanhuman

Gene DMD, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-231ENST00000634285 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
DMD-231ENST00000634285 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
DMD-231ENST00000634285 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
DMD-231ENST00000634285 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
DMD-231ENST00000634285 FOXD1Q16676 465 aa15.08■□□□□ 0
DMD-231ENST00000634285 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
DMD-231ENST00000634285 MSH5O43196 834 aa14.09□□□□□ -0.15
DMD-231ENST00000634285 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
DMD-231ENST00000634285 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
DMD-231ENST00000634285 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
DMD-231ENST00000634285 ADRA2BP18089 450 aa13.94□□□□□ -0.18
DMD-231ENST00000634285 MAPK8IP2Q13387 824 aaPredicted RBP12.85□□□□□ -0.35
DMD-231ENST00000634285 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
DMD-231ENST00000634285 SCAF1Q9H7N4 1312 aaKnown RBP12.66□□□□□ -0.38
DMD-231ENST00000634285 PPP4R3CPQ6ZMV5 832 aa12.42□□□□□ -0.42
DMD-231ENST00000634285 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
DMD-231ENST00000634285 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
DMD-231ENST00000634285 DCAF8L1A6NGE4 600 aa12.16□□□□□ -0.46
DMD-231ENST00000634285 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
DMD-231ENST00000634285 CACNB1Q02641 598 aaPredicted RBP12.12□□□□□ -0.47
DMD-231ENST00000634285 RNF39Q9H2S5 420 aa12.07□□□□□ -0.48
DMD-231ENST00000634285 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
DMD-231ENST00000634285 C1QBPQ07021 282 aaKnown RBP11.84□□□□□ -0.51
DMD-231ENST00000634285 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
DMD-231ENST00000634285 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
DMD-231ENST00000634285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
DMD-231ENST00000634285 U3KPZ7 1027 aaPredicted RBP11.45□□□□□ -0.58
DMD-231ENST00000634285 KCNA4P22459 653 aa11.44□□□□□ -0.58
DMD-231ENST00000634285 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
DMD-231ENST00000634285 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
DMD-231ENST00000634285 DSG3P32926 999 aa11.25□□□□□ -0.61
DMD-231ENST00000634285 CAPN15O75808 1086 aa11.21□□□□□ -0.61
DMD-231ENST00000634285 EHMT2Q96KQ7 1210 aa11.02□□□□□ -0.65
DMD-231ENST00000634285 TRHP20396 242 aaPredicted RBP11□□□□□ -0.65
DMD-231ENST00000634285 ZNF219Q9P2Y4 722 aaPredicted RBP11□□□□□ -0.65
DMD-231ENST00000634285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.99□□□□□ -0.65
DMD-231ENST00000634285 APLP2Q06481 763 aa10.99□□□□□ -0.65
DMD-231ENST00000634285 HNRNPUL2Q1KMD3 747 aaKnown RBP10.99□□□□□ -0.65
DMD-231ENST00000634285 ABCB7O75027 752 aa10.97□□□□□ -0.65
DMD-231ENST00000634285 SAMD1Q6SPF0 538 aaPredicted RBP10.95□□□□□ -0.66
DMD-231ENST00000634285 POTEHQ6S545 545 aa10.91□□□□□ -0.66
DMD-231ENST00000634285 MYCNP04198 464 aaPredicted RBP10.85□□□□□ -0.67
DMD-231ENST00000634285 SLC4A1APQ9BWU0 796 aaKnown RBP10.8□□□□□ -0.68
DMD-231ENST00000634285 POLA2Q14181 598 aa10.71□□□□□ -0.69
DMD-231ENST00000634285 FOXD4L1Q9NU39 408 aa10.68□□□□□ -0.7
DMD-231ENST00000634285 RBM42Q9BTD8 480 aaKnown RBP10.67□□□□□ -0.7
DMD-231ENST00000634285 ATF5Q9Y2D1 282 aaPredicted RBP10.67□□□□□ -0.7
DMD-231ENST00000634285 ZBTB22O15209 634 aa10.58□□□□□ -0.72
DMD-231ENST00000634285 CHRDL2Q6WN34 429 aa10.52□□□□□ -0.73
DMD-231ENST00000634285 CSRNP3Q8WYN3 585 aa10.52□□□□□ -0.73
DMD-231ENST00000634285 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
DMD-231ENST00000634285 AKT1S1Q96B36 256 aa10.43□□□□□ -0.74
DMD-231ENST00000634285 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
DMD-231ENST00000634285 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
DMD-231ENST00000634285 REM2Q8IYK8 340 aaPredicted RBP10.35□□□□□ -0.75
DMD-231ENST00000634285 PIP4P2Q8N4L2 257 aa10.27□□□□□ -0.77
DMD-231ENST00000634285 PITPNM1O00562 1244 aa10.26□□□□□ -0.77
DMD-231ENST00000634285 FXR2P51116 673 aaKnown RBP eCLIP10.2□□□□□ -0.78
DMD-231ENST00000634285 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
DMD-231ENST00000634285 SP7Q8TDD2 431 aaPredicted RBP10.18□□□□□ -0.78
DMD-231ENST00000634285 SPDYE2BA6NHP3 402 aa10.16□□□□□ -0.78
DMD-231ENST00000634285 SPDYE6P0CI01 402 aa10.16□□□□□ -0.78
DMD-231ENST00000634285 SPDYE2Q495Y8 402 aa10.16□□□□□ -0.78
DMD-231ENST00000634285 FBLN2P98095 1184 aa10.14□□□□□ -0.79
DMD-231ENST00000634285 SSUH2Q9Y2M2 353 aa10.07□□□□□ -0.8
DMD-231ENST00000634285 HAX1O00165 279 aa10.03□□□□□ -0.8
DMD-231ENST00000634285 EVX2Q03828 476 aa10.01□□□□□ -0.81
DMD-231ENST00000634285 SPDYE1Q8NFV5 336 aaPredicted RBP9.99□□□□□ -0.81
DMD-231ENST00000634285 ZNF692Q9BU19 519 aaPredicted RBP9.99□□□□□ -0.81
DMD-231ENST00000634285 SLC24A1O60721 1099 aa9.96□□□□□ -0.82
DMD-231ENST00000634285 PRKAR2AP13861 404 aaKnown RBP9.95□□□□□ -0.82
DMD-231ENST00000634285 CLEC11AQ9Y240 323 aa9.94□□□□□ -0.82
DMD-231ENST00000634285 C19orf67A6NJJ6 358 aa9.88□□□□□ -0.83
DMD-231ENST00000634285 PABPN1Q86U42 306 aaKnown RBP eCLIP9.86□□□□□ -0.83
DMD-231ENST00000634285 AMER1Q5JTC6 1135 aaPredicted RBP9.85□□□□□ -0.83
DMD-231ENST00000634285 CHADLQ6NUI6 762 aa9.83□□□□□ -0.84
DMD-231ENST00000634285 RTN4Q9NQC3 1192 aaKnown RBP9.8□□□□□ -0.84
DMD-231ENST00000634285 PRR29P0C7W0 189 aa9.77□□□□□ -0.85
DMD-231ENST00000634285 NISCHQ9Y2I1 1504 aa9.74□□□□□ -0.85
DMD-231ENST00000634285 GABBR2O75899 941 aa9.73□□□□□ -0.85
DMD-231ENST00000634285 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
DMD-231ENST00000634285 CD44P16070 742 aaKnown RBP9.63□□□□□ -0.87
DMD-231ENST00000634285 CREBZFQ9NS37 354 aa9.6□□□□□ -0.87
DMD-231ENST00000634285 POTEIP0CG38 1075 aa9.58□□□□□ -0.88
DMD-231ENST00000634285 SPDYE4A6NLX3 237 aa9.56□□□□□ -0.88
DMD-231ENST00000634285 LHX8Q68G74 356 aa9.53□□□□□ -0.88
DMD-231ENST00000634285 STAG3Q9UJ98 1225 aa9.53□□□□□ -0.88
DMD-231ENST00000634285 FKBP8Q14318 412 aa9.52□□□□□ -0.89
DMD-231ENST00000634285 ZNF579Q8NAF0 562 aaKnown RBP9.52□□□□□ -0.89
DMD-231ENST00000634285 CLCN6P51797 869 aa9.49□□□□□ -0.89
DMD-231ENST00000634285 ZRANB1Q9UGI0 708 aa9.46□□□□□ -0.9
DMD-231ENST00000634285 MNX1P50219 401 aaPredicted RBP9.45□□□□□ -0.9
DMD-231ENST00000634285 PROM2Q8N271 834 aa9.43□□□□□ -0.9
DMD-231ENST00000634285 GALR2O43603 387 aaPredicted RBP9.4□□□□□ -0.9
DMD-231ENST00000634285 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
DMD-231ENST00000634285 PHF12Q96QT6 1004 aa9.37□□□□□ -0.91
DMD-231ENST00000634285 NPM1P06748 294 aaKnown RBP eCLIP9.31□□□□□ -0.92
DMD-231ENST00000634285 PAK3O75914 559 aaPredicted RBP9.29□□□□□ -0.92
DMD-231ENST00000634285 POTEB2H3BUK9 544 aa9.26□□□□□ -0.93
DMD-231ENST00000634285 PELP1Q8IZL8 1130 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms