RNA–Protein interactions for RNA: ENST00000624846.3

CU638689.4-204, humanhuman

TSL 1 (best)

Gene CU638689.4, Length 934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU638689.4-204ENST00000624846 AEBP2Q6ZN18 517 aaPredicted RBP27.59■■■□□ 2.01
CU638689.4-204ENST00000624846 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
CU638689.4-204ENST00000624846 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
CU638689.4-204ENST00000624846 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
CU638689.4-204ENST00000624846 FOXD1Q16676 465 aa22.12■■□□□ 1.13
CU638689.4-204ENST00000624846 POTEDQ86YR6 584 aa21.87■■□□□ 1.09
CU638689.4-204ENST00000624846 MSH5O43196 834 aa20.96■□□□□ 0.95
CU638689.4-204ENST00000624846 PIAS4Q8N2W9 510 aaPredicted RBP20.44■□□□□ 0.86
CU638689.4-204ENST00000624846 PPP6R1Q9UPN7 881 aa20.1■□□□□ 0.81
CU638689.4-204ENST00000624846 ADRA2BP18089 450 aa19.96■□□□□ 0.79
CU638689.4-204ENST00000624846 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
CU638689.4-204ENST00000624846 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
CU638689.4-204ENST00000624846 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
CU638689.4-204ENST00000624846 CACNB1Q02641 598 aaPredicted RBP18.47■□□□□ 0.55
CU638689.4-204ENST00000624846 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
CU638689.4-204ENST00000624846 RNF39Q9H2S5 420 aa17.85■□□□□ 0.45
CU638689.4-204ENST00000624846 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
CU638689.4-204ENST00000624846 HOXD11P31277 338 aaPredicted RBP17.61■□□□□ 0.41
CU638689.4-204ENST00000624846 C1QBPQ07021 282 aaKnown RBP17.52■□□□□ 0.4
CU638689.4-204ENST00000624846 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
CU638689.4-204ENST00000624846 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
CU638689.4-204ENST00000624846 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
CU638689.4-204ENST00000624846 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
CU638689.4-204ENST00000624846 POTEHQ6S545 545 aa16.96■□□□□ 0.31
CU638689.4-204ENST00000624846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.27
CU638689.4-204ENST00000624846 DSG3P32926 999 aa16.45■□□□□ 0.22
CU638689.4-204ENST00000624846 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
CU638689.4-204ENST00000624846 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
CU638689.4-204ENST00000624846 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
CU638689.4-204ENST00000624846 CAPN15O75808 1086 aa16.31■□□□□ 0.2
CU638689.4-204ENST00000624846 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
CU638689.4-204ENST00000624846 ABCB7O75027 752 aa15.89■□□□□ 0.13
CU638689.4-204ENST00000624846 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
CU638689.4-204ENST00000624846 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
CU638689.4-204ENST00000624846 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
CU638689.4-204ENST00000624846 APLP2Q06481 763 aa15.71■□□□□ 0.11
CU638689.4-204ENST00000624846 CHRDL2Q6WN34 429 aa15.67■□□□□ 0.1
CU638689.4-204ENST00000624846 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
CU638689.4-204ENST00000624846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
CU638689.4-204ENST00000624846 HNRNPUL2Q1KMD3 747 aaKnown RBP15.53■□□□□ 0.08
CU638689.4-204ENST00000624846 SP7Q8TDD2 431 aaPredicted RBP15.52■□□□□ 0.08
CU638689.4-204ENST00000624846 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
CU638689.4-204ENST00000624846 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
CU638689.4-204ENST00000624846 POLA2Q14181 598 aa15.27■□□□□ 0.04
CU638689.4-204ENST00000624846 KCNA4P22459 653 aa15.2■□□□□ 0.02
CU638689.4-204ENST00000624846 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
CU638689.4-204ENST00000624846 PIP4P2Q8N4L2 257 aa15.14■□□□□ 0.01
CU638689.4-204ENST00000624846 HAX1O00165 279 aa15.05■□□□□ -0
CU638689.4-204ENST00000624846 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
CU638689.4-204ENST00000624846 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
CU638689.4-204ENST00000624846 FXR2P51116 673 aaKnown RBP eCLIP14.93□□□□□ -0.02
CU638689.4-204ENST00000624846 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
CU638689.4-204ENST00000624846 EVX2Q03828 476 aa14.87□□□□□ -0.03
CU638689.4-204ENST00000624846 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
CU638689.4-204ENST00000624846 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
CU638689.4-204ENST00000624846 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
CU638689.4-204ENST00000624846 LHX8Q68G74 356 aa14.54□□□□□ -0.08
CU638689.4-204ENST00000624846 C19orf67A6NJJ6 358 aa14.48□□□□□ -0.09
CU638689.4-204ENST00000624846 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
CU638689.4-204ENST00000624846 GABBR2O75899 941 aa14.46□□□□□ -0.09
CU638689.4-204ENST00000624846 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
CU638689.4-204ENST00000624846 SPDYE2BA6NHP3 402 aa14.36□□□□□ -0.11
CU638689.4-204ENST00000624846 SPDYE6P0CI01 402 aa14.36□□□□□ -0.11
CU638689.4-204ENST00000624846 SPDYE2Q495Y8 402 aa14.36□□□□□ -0.11
CU638689.4-204ENST00000624846 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
CU638689.4-204ENST00000624846 SPDYE1Q8NFV5 336 aaPredicted RBP14.28□□□□□ -0.12
CU638689.4-204ENST00000624846 PLSCR2Q9NRY7 297 aa14.26□□□□□ -0.13
CU638689.4-204ENST00000624846 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
CU638689.4-204ENST00000624846 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
CU638689.4-204ENST00000624846 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
CU638689.4-204ENST00000624846 FBLN2P98095 1184 aa14.14□□□□□ -0.15
CU638689.4-204ENST00000624846 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
CU638689.4-204ENST00000624846 ZNF692Q9BU19 519 aaPredicted RBP14.06□□□□□ -0.16
CU638689.4-204ENST00000624846 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
CU638689.4-204ENST00000624846 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
CU638689.4-204ENST00000624846 ZBTB22O15209 634 aa14□□□□□ -0.17
CU638689.4-204ENST00000624846 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
CU638689.4-204ENST00000624846 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
CU638689.4-204ENST00000624846 CLCN6P51797 869 aa13.9□□□□□ -0.18
CU638689.4-204ENST00000624846 DCBLD2Q96PD2 775 aa13.86□□□□□ -0.19
CU638689.4-204ENST00000624846 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
CU638689.4-204ENST00000624846 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
CU638689.4-204ENST00000624846 OTUD5Q96G74 571 aa13.8□□□□□ -0.2
CU638689.4-204ENST00000624846 POTEMA6NI47 508 aa13.74□□□□□ -0.21
CU638689.4-204ENST00000624846 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
CU638689.4-204ENST00000624846 POTEB2H3BUK9 544 aa13.7□□□□□ -0.22
CU638689.4-204ENST00000624846 POTEGQ6S5H5 508 aa13.67□□□□□ -0.22
CU638689.4-204ENST00000624846 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
CU638689.4-204ENST00000624846 GALR2O43603 387 aaPredicted RBP13.63□□□□□ -0.23
CU638689.4-204ENST00000624846 CCDC180Q9P1Z9 1646 aa13.62□□□□□ -0.23
CU638689.4-204ENST00000624846 PCDH10Q9P2E7 1040 aa13.53□□□□□ -0.24
CU638689.4-204ENST00000624846 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
CU638689.4-204ENST00000624846 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.25
CU638689.4-204ENST00000624846 ABCC9O60706 1549 aa13.44□□□□□ -0.26
CU638689.4-204ENST00000624846 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
CU638689.4-204ENST00000624846 POTEJP0CG39 1038 aa13.38□□□□□ -0.27
CU638689.4-204ENST00000624846 LCE2DQ5TA82 110 aaPredicted RBP13.37□□□□□ -0.27
CU638689.4-204ENST00000624846 METRNQ9UJH8 293 aa13.32□□□□□ -0.28
CU638689.4-204ENST00000624846 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
CU638689.4-204ENST00000624846 ASTLQ6HA08 431 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms