RNA–Protein interactions for RNA: ENST00000623989.3

CU633906.2-203, humanhuman

TSL 1 (best)

Gene CU633906.2, Length 767 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU633906.2-203ENST00000623989 AEBP2Q6ZN18 517 aaPredicted RBP40.3■■■■■ 4.04
CU633906.2-203ENST00000623989 CHIC1Q5VXU3 224 aa38.75■■■■□ 3.79
CU633906.2-203ENST00000623989 SENP3Q9H4L4 574 aaPredicted RBP34.36■■■■□ 3.09
CU633906.2-203ENST00000623989 PHF23Q9BUL5 403 aaPredicted RBP33.98■■■■□ 3.03
CU633906.2-203ENST00000623989 FOXD1Q16676 465 aa31.92■■■□□ 2.7
CU633906.2-203ENST00000623989 PLPPR3Q6T4P5 718 aa31.2■■■□□ 2.59
CU633906.2-203ENST00000623989 PPP6R1Q9UPN7 881 aa30.18■■■□□ 2.42
CU633906.2-203ENST00000623989 ADRA2BP18089 450 aa30.14■■■□□ 2.42
CU633906.2-203ENST00000623989 PIAS4Q8N2W9 510 aaPredicted RBP29.98■■■□□ 2.39
CU633906.2-203ENST00000623989 MSH5O43196 834 aa29.74■■■□□ 2.35
CU633906.2-203ENST00000623989 POTEDQ86YR6 584 aa28.19■■■□□ 2.1
CU633906.2-203ENST00000623989 SCAF1Q9H7N4 1312 aaKnown RBP27.62■■■□□ 2.01
CU633906.2-203ENST00000623989 MAPK8IP2Q13387 824 aaPredicted RBP27.52■■■□□ 2
CU633906.2-203ENST00000623989 PPP4R3CPQ6ZMV5 832 aa27.38■■□□□ 1.97
CU633906.2-203ENST00000623989 DMRT2Q9Y5R5 561 aa27.3■■□□□ 1.96
CU633906.2-203ENST00000623989 CNKSR2Q8WXI2 1034 aa26.78■■□□□ 1.88
CU633906.2-203ENST00000623989 NCBP3Q53F19 620 aaKnown RBP26.51■■□□□ 1.83
CU633906.2-203ENST00000623989 HOXD11P31277 338 aaPredicted RBP26.47■■□□□ 1.83
CU633906.2-203ENST00000623989 RNF216Q9NWF9 866 aaPredicted RBP26.41■■□□□ 1.82
CU633906.2-203ENST00000623989 DCAF8L1A6NGE4 600 aa26.18■■□□□ 1.78
CU633906.2-203ENST00000623989 NPM3O75607 178 aaKnown RBP26.1■■□□□ 1.77
CU633906.2-203ENST00000623989 KCNA4P22459 653 aa26.01■■□□□ 1.75
CU633906.2-203ENST00000623989 DNAJC5BQ9UF47 199 aa25.48■■□□□ 1.67
CU633906.2-203ENST00000623989 RNF39Q9H2S5 420 aa25.4■■□□□ 1.66
CU633906.2-203ENST00000623989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.25■■□□□ 1.63
CU633906.2-203ENST00000623989 CACNB1Q02641 598 aaPredicted RBP25.22■■□□□ 1.63
CU633906.2-203ENST00000623989 C1QBPQ07021 282 aaKnown RBP25.07■■□□□ 1.6
CU633906.2-203ENST00000623989 SLC4A2P04920 1241 aa24.78■■□□□ 1.56
CU633906.2-203ENST00000623989 U3KPZ7 1027 aaPredicted RBP24.76■■□□□ 1.55
CU633906.2-203ENST00000623989 SLC4A1APQ9BWU0 796 aaKnown RBP24.68■■□□□ 1.54
CU633906.2-203ENST00000623989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.26■■□□□ 1.47
CU633906.2-203ENST00000623989 HNRNPUL2Q1KMD3 747 aaKnown RBP24.26■■□□□ 1.47
CU633906.2-203ENST00000623989 SPINK5Q9NQ38 1064 aaPredicted RBP24.25■■□□□ 1.47
CU633906.2-203ENST00000623989 CAPN15O75808 1086 aa24.22■■□□□ 1.47
CU633906.2-203ENST00000623989 APLP2Q06481 763 aa24.17■■□□□ 1.46
CU633906.2-203ENST00000623989 MYCNP04198 464 aaPredicted RBP24.16■■□□□ 1.46
CU633906.2-203ENST00000623989 FOXD4L1Q9NU39 408 aa24.16■■□□□ 1.46
CU633906.2-203ENST00000623989 SAMD1Q6SPF0 538 aaPredicted RBP24.14■■□□□ 1.45
CU633906.2-203ENST00000623989 TRHP20396 242 aaPredicted RBP23.93■■□□□ 1.42
CU633906.2-203ENST00000623989 DSG3P32926 999 aa23.93■■□□□ 1.42
CU633906.2-203ENST00000623989 ZNF219Q9P2Y4 722 aaPredicted RBP23.93■■□□□ 1.42
CU633906.2-203ENST00000623989 ZBTB22O15209 634 aa23.92■■□□□ 1.42
CU633906.2-203ENST00000623989 ABCB7O75027 752 aa23.68■■□□□ 1.38
CU633906.2-203ENST00000623989 ATF5Q9Y2D1 282 aaPredicted RBP23.5■■□□□ 1.35
CU633906.2-203ENST00000623989 POLA2Q14181 598 aa23.37■■□□□ 1.33
CU633906.2-203ENST00000623989 ATXN8OSP0DMR3 200 aa23.36■■□□□ 1.33
CU633906.2-203ENST00000623989 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
CU633906.2-203ENST00000623989 EHMT2Q96KQ7 1210 aa23.23■■□□□ 1.31
CU633906.2-203ENST00000623989 ZBTB12Q9Y330 459 aaPredicted RBP23■■□□□ 1.27
CU633906.2-203ENST00000623989 RBM42Q9BTD8 480 aaKnown RBP22.87■■□□□ 1.25
CU633906.2-203ENST00000623989 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
CU633906.2-203ENST00000623989 FBLN2P98095 1184 aa22.63■■□□□ 1.21
CU633906.2-203ENST00000623989 MKRN4PQ13434 485 aaPredicted RBP22.47■■□□□ 1.19
CU633906.2-203ENST00000623989 AKT1S1Q96B36 256 aa22.42■■□□□ 1.18
CU633906.2-203ENST00000623989 SPDYE2BA6NHP3 402 aa22.31■■□□□ 1.16
CU633906.2-203ENST00000623989 SPDYE6P0CI01 402 aa22.31■■□□□ 1.16
CU633906.2-203ENST00000623989 SPDYE2Q495Y8 402 aa22.31■■□□□ 1.16
CU633906.2-203ENST00000623989 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
CU633906.2-203ENST00000623989 POTEHQ6S545 545 aa22.2■■□□□ 1.14
CU633906.2-203ENST00000623989 REM2Q8IYK8 340 aaPredicted RBP22.2■■□□□ 1.14
CU633906.2-203ENST00000623989 CHRDL2Q6WN34 429 aa22.16■■□□□ 1.14
CU633906.2-203ENST00000623989 ZNF692Q9BU19 519 aaPredicted RBP22.09■■□□□ 1.13
CU633906.2-203ENST00000623989 SSUH2Q9Y2M2 353 aa22.05■■□□□ 1.12
CU633906.2-203ENST00000623989 PITPNM1O00562 1244 aa21.97■■□□□ 1.11
CU633906.2-203ENST00000623989 SPDYE1Q8NFV5 336 aaPredicted RBP21.8■■□□□ 1.08
CU633906.2-203ENST00000623989 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
CU633906.2-203ENST00000623989 PIP4P2Q8N4L2 257 aa21.72■■□□□ 1.07
CU633906.2-203ENST00000623989 CLEC11AQ9Y240 323 aa21.72■■□□□ 1.07
CU633906.2-203ENST00000623989 SPDYE4A6NLX3 237 aa21.67■■□□□ 1.06
CU633906.2-203ENST00000623989 FXR2P51116 673 aaKnown RBP eCLIP21.66■■□□□ 1.06
CU633906.2-203ENST00000623989 PRR29P0C7W0 189 aa21.43■■□□□ 1.02
CU633906.2-203ENST00000623989 PRKAR2AP13861 404 aaKnown RBP21.4■■□□□ 1.02
CU633906.2-203ENST00000623989 STAG3Q9UJ98 1225 aa21.31■■□□□ 1
CU633906.2-203ENST00000623989 CHADLQ6NUI6 762 aa21.25■□□□□ 0.99
CU633906.2-203ENST00000623989 PROM2Q8N271 834 aa21.21■□□□□ 0.99
CU633906.2-203ENST00000623989 HAX1O00165 279 aa21.2■□□□□ 0.98
CU633906.2-203ENST00000623989 FKBP8Q14318 412 aa21.08■□□□□ 0.97
CU633906.2-203ENST00000623989 SP7Q8TDD2 431 aaPredicted RBP21.04■□□□□ 0.96
CU633906.2-203ENST00000623989 CREBZFQ9NS37 354 aa21■□□□□ 0.95
CU633906.2-203ENST00000623989 FARP1Q9Y4F1 1045 aaPredicted RBP20.99■□□□□ 0.95
CU633906.2-203ENST00000623989 C19orf67A6NJJ6 358 aa20.96■□□□□ 0.95
CU633906.2-203ENST00000623989 EVX2Q03828 476 aa20.92■□□□□ 0.94
CU633906.2-203ENST00000623989 CD44P16070 742 aaKnown RBP20.77■□□□□ 0.92
CU633906.2-203ENST00000623989 MNX1P50219 401 aaPredicted RBP20.69■□□□□ 0.9
CU633906.2-203ENST00000623989 NPM1P06748 294 aaKnown RBP eCLIP20.67■□□□□ 0.9
CU633906.2-203ENST00000623989 MIER1Q8N108 512 aa20.61■□□□□ 0.89
CU633906.2-203ENST00000623989 PLEKHG5O94827 1062 aa20.6■□□□□ 0.89
CU633906.2-203ENST00000623989 PLCD3Q8N3E9 789 aa20.54■□□□□ 0.88
CU633906.2-203ENST00000623989 ZRANB1Q9UGI0 708 aa20.54■□□□□ 0.88
CU633906.2-203ENST00000623989 GABBR2O75899 941 aa20.52■□□□□ 0.88
CU633906.2-203ENST00000623989 FBXO3Q9UK99 471 aa20.52■□□□□ 0.88
CU633906.2-203ENST00000623989 PAK3O75914 559 aaPredicted RBP20.51■□□□□ 0.87
CU633906.2-203ENST00000623989 ZNF579Q8NAF0 562 aaKnown RBP20.47■□□□□ 0.87
CU633906.2-203ENST00000623989 CLCN6P51797 869 aa20.39■□□□□ 0.85
CU633906.2-203ENST00000623989 ZBTB47Q9UFB7 747 aaPredicted RBP20.37■□□□□ 0.85
CU633906.2-203ENST00000623989 PHF12Q96QT6 1004 aa20.29■□□□□ 0.84
CU633906.2-203ENST00000623989 TSPYL2Q9H2G4 693 aaPredicted RBP20.28■□□□□ 0.84
CU633906.2-203ENST00000623989 VASPP50552 380 aaPredicted RBP20.26■□□□□ 0.83
CU633906.2-203ENST00000623989 RASEFQ8IZ41 740 aa20.23■□□□□ 0.83
CU633906.2-203ENST00000623989 CCDC61Q9Y6R9 512 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms