RNA–Protein interactions for RNA: ENST00000621535.1

CFTR-211, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 5

Gene CFTR, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-211ENST00000621535 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
CFTR-211ENST00000621535 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
CFTR-211ENST00000621535 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
CFTR-211ENST00000621535 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
CFTR-211ENST00000621535 FOXD1Q16676 465 aa13.72□□□□□ -0.21
CFTR-211ENST00000621535 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
CFTR-211ENST00000621535 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
CFTR-211ENST00000621535 ADRA2BP18089 450 aa13.08□□□□□ -0.32
CFTR-211ENST00000621535 PIAS4Q8N2W9 510 aaPredicted RBP12.9□□□□□ -0.34
CFTR-211ENST00000621535 MSH5O43196 834 aa12.68□□□□□ -0.38
CFTR-211ENST00000621535 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
CFTR-211ENST00000621535 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
CFTR-211ENST00000621535 SCAF1Q9H7N4 1312 aaKnown RBP11.92□□□□□ -0.5
CFTR-211ENST00000621535 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
CFTR-211ENST00000621535 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
CFTR-211ENST00000621535 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
CFTR-211ENST00000621535 NCBP3Q53F19 620 aaKnown RBP11.55□□□□□ -0.56
CFTR-211ENST00000621535 KCNA4P22459 653 aa11.45□□□□□ -0.58
CFTR-211ENST00000621535 RNF216Q9NWF9 866 aaPredicted RBP11.42□□□□□ -0.58
CFTR-211ENST00000621535 HOXD11P31277 338 aaPredicted RBP11.41□□□□□ -0.58
CFTR-211ENST00000621535 NPM3O75607 178 aaKnown RBP11.38□□□□□ -0.59
CFTR-211ENST00000621535 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
CFTR-211ENST00000621535 DNAJC5BQ9UF47 199 aa10.98□□□□□ -0.65
CFTR-211ENST00000621535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.66
CFTR-211ENST00000621535 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
CFTR-211ENST00000621535 RNF39Q9H2S5 420 aa10.86□□□□□ -0.67
CFTR-211ENST00000621535 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
CFTR-211ENST00000621535 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
CFTR-211ENST00000621535 C1QBPQ07021 282 aaKnown RBP10.72□□□□□ -0.69
CFTR-211ENST00000621535 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
CFTR-211ENST00000621535 FOXD4L1Q9NU39 408 aa10.56□□□□□ -0.72
CFTR-211ENST00000621535 ZBTB22O15209 634 aa10.52□□□□□ -0.73
CFTR-211ENST00000621535 MYCNP04198 464 aaPredicted RBP10.5□□□□□ -0.73
CFTR-211ENST00000621535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.48□□□□□ -0.73
CFTR-211ENST00000621535 HNRNPUL2Q1KMD3 747 aaKnown RBP10.48□□□□□ -0.73
CFTR-211ENST00000621535 SPINK5Q9NQ38 1064 aaPredicted RBP10.48□□□□□ -0.73
CFTR-211ENST00000621535 CAPN15O75808 1086 aa10.46□□□□□ -0.73
CFTR-211ENST00000621535 SAMD1Q6SPF0 538 aaPredicted RBP10.44□□□□□ -0.74
CFTR-211ENST00000621535 APLP2Q06481 763 aa10.41□□□□□ -0.74
CFTR-211ENST00000621535 EHMT2Q96KQ7 1210 aa10.4□□□□□ -0.74
CFTR-211ENST00000621535 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
CFTR-211ENST00000621535 NISCHQ9Y2I1 1504 aa10.38□□□□□ -0.75
CFTR-211ENST00000621535 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
CFTR-211ENST00000621535 ZNF219Q9P2Y4 722 aaPredicted RBP10.3□□□□□ -0.76
CFTR-211ENST00000621535 DSG3P32926 999 aa10.29□□□□□ -0.76
CFTR-211ENST00000621535 ATF5Q9Y2D1 282 aaPredicted RBP10.28□□□□□ -0.76
CFTR-211ENST00000621535 ABCB7O75027 752 aa10.25□□□□□ -0.77
CFTR-211ENST00000621535 ATXN8OSP0DMR3 200 aa10.18□□□□□ -0.78
CFTR-211ENST00000621535 POLA2Q14181 598 aa10.16□□□□□ -0.78
CFTR-211ENST00000621535 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
CFTR-211ENST00000621535 FBLN2P98095 1184 aa9.84□□□□□ -0.83
CFTR-211ENST00000621535 MKRN4PQ13434 485 aaPredicted RBP9.8□□□□□ -0.84
CFTR-211ENST00000621535 OSCARQ8IYS5 282 aa9.8□□□□□ -0.84
CFTR-211ENST00000621535 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
CFTR-211ENST00000621535 SPDYE2BA6NHP3 402 aa9.64□□□□□ -0.87
CFTR-211ENST00000621535 SPDYE6P0CI01 402 aa9.64□□□□□ -0.87
CFTR-211ENST00000621535 SPDYE2Q495Y8 402 aa9.64□□□□□ -0.87
CFTR-211ENST00000621535 AKT1S1Q96B36 256 aa9.64□□□□□ -0.87
CFTR-211ENST00000621535 ZNF692Q9BU19 519 aaPredicted RBP9.63□□□□□ -0.87
CFTR-211ENST00000621535 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
CFTR-211ENST00000621535 SSUH2Q9Y2M2 353 aa9.54□□□□□ -0.88
CFTR-211ENST00000621535 SPDYE4A6NLX3 237 aa9.51□□□□□ -0.89
CFTR-211ENST00000621535 PABPN1Q86U42 306 aaKnown RBP eCLIP9.49□□□□□ -0.89
CFTR-211ENST00000621535 CHRDL2Q6WN34 429 aa9.48□□□□□ -0.89
CFTR-211ENST00000621535 PITPNM1O00562 1244 aa9.46□□□□□ -0.9
CFTR-211ENST00000621535 CLEC11AQ9Y240 323 aa9.44□□□□□ -0.9
CFTR-211ENST00000621535 SPDYE1Q8NFV5 336 aaPredicted RBP9.41□□□□□ -0.9
CFTR-211ENST00000621535 POTEHQ6S545 545 aa9.38□□□□□ -0.91
CFTR-211ENST00000621535 FKBP8Q14318 412 aa9.36□□□□□ -0.91
CFTR-211ENST00000621535 PIP4P2Q8N4L2 257 aa9.33□□□□□ -0.92
CFTR-211ENST00000621535 PRR29P0C7W0 189 aa9.31□□□□□ -0.92
CFTR-211ENST00000621535 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
CFTR-211ENST00000621535 PROM2Q8N271 834 aa9.26□□□□□ -0.93
CFTR-211ENST00000621535 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
CFTR-211ENST00000621535 PRKAR2AP13861 404 aaKnown RBP9.24□□□□□ -0.93
CFTR-211ENST00000621535 CHADLQ6NUI6 762 aa9.22□□□□□ -0.93
CFTR-211ENST00000621535 CREBZFQ9NS37 354 aa9.13□□□□□ -0.95
CFTR-211ENST00000621535 HAX1O00165 279 aa9.11□□□□□ -0.95
CFTR-211ENST00000621535 FARP1Q9Y4F1 1045 aaPredicted RBP9.09□□□□□ -0.95
CFTR-211ENST00000621535 MIER1Q8N108 512 aa9.07□□□□□ -0.96
CFTR-211ENST00000621535 FBXO3Q9UK99 471 aa9.04□□□□□ -0.96
CFTR-211ENST00000621535 EVX2Q03828 476 aa9.02□□□□□ -0.97
CFTR-211ENST00000621535 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
CFTR-211ENST00000621535 CCDC180Q9P1Z9 1646 aa9.02□□□□□ -0.97
CFTR-211ENST00000621535 C19orf67A6NJJ6 358 aa9□□□□□ -0.97
CFTR-211ENST00000621535 PLEKHG5O94827 1062 aa8.99□□□□□ -0.97
CFTR-211ENST00000621535 MNX1P50219 401 aaPredicted RBP8.99□□□□□ -0.97
CFTR-211ENST00000621535 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
CFTR-211ENST00000621535 CD44P16070 742 aaKnown RBP8.95□□□□□ -0.98
CFTR-211ENST00000621535 SP7Q8TDD2 431 aaPredicted RBP8.93□□□□□ -0.98
CFTR-211ENST00000621535 VASPP50552 380 aaPredicted RBP8.92□□□□□ -0.98
CFTR-211ENST00000621535 ZRANB1Q9UGI0 708 aa8.89□□□□□ -0.99
CFTR-211ENST00000621535 ZBTB47Q9UFB7 747 aaPredicted RBP8.88□□□□□ -0.99
CFTR-211ENST00000621535 KLHL34Q8N239 644 aa8.87□□□□□ -0.99
CFTR-211ENST00000621535 PAK3O75914 559 aaPredicted RBP8.86□□□□□ -0.99
CFTR-211ENST00000621535 TSPYL2Q9H2G4 693 aaPredicted RBP8.86□□□□□ -0.99
CFTR-211ENST00000621535 RASEFQ8IZ41 740 aa8.83□□□□□ -1
CFTR-211ENST00000621535 GABBR2O75899 941 aa8.82□□□□□ -1
CFTR-211ENST00000621535 NUBP1P53384 320 aa8.81□□□□□ -1
CFTR-211ENST00000621535 IFNLR1Q8IU57 520 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms