RNA–Protein interactions for RNA: ENST00000617302.1

PCDH18-207, Transcript of protocadherin 18, humanhuman

TSL 5

Gene PCDH18, Length 895 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-207ENST00000617302 AEBP2Q6ZN18 517 aaPredicted RBP25.92■■□□□ 1.74
PCDH18-207ENST00000617302 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
PCDH18-207ENST00000617302 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
PCDH18-207ENST00000617302 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
PCDH18-207ENST00000617302 FOXD1Q16676 465 aa20.59■□□□□ 0.89
PCDH18-207ENST00000617302 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
PCDH18-207ENST00000617302 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
PCDH18-207ENST00000617302 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
PCDH18-207ENST00000617302 MSH5O43196 834 aa19.18■□□□□ 0.66
PCDH18-207ENST00000617302 PIAS4Q8N2W9 510 aaPredicted RBP19.16■□□□□ 0.66
PCDH18-207ENST00000617302 ADRA2BP18089 450 aa19.14■□□□□ 0.65
PCDH18-207ENST00000617302 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
PCDH18-207ENST00000617302 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
PCDH18-207ENST00000617302 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
PCDH18-207ENST00000617302 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
PCDH18-207ENST00000617302 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
PCDH18-207ENST00000617302 CNKSR2Q8WXI2 1034 aa16.78■□□□□ 0.28
PCDH18-207ENST00000617302 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
PCDH18-207ENST00000617302 RNF216Q9NWF9 866 aaPredicted RBP16.65■□□□□ 0.26
PCDH18-207ENST00000617302 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
PCDH18-207ENST00000617302 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
PCDH18-207ENST00000617302 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
PCDH18-207ENST00000617302 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
PCDH18-207ENST00000617302 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
PCDH18-207ENST00000617302 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
PCDH18-207ENST00000617302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.14
PCDH18-207ENST00000617302 KCNA4P22459 653 aa15.9■□□□□ 0.14
PCDH18-207ENST00000617302 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
PCDH18-207ENST00000617302 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
PCDH18-207ENST00000617302 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
PCDH18-207ENST00000617302 CAPN15O75808 1086 aa15.38■□□□□ 0.05
PCDH18-207ENST00000617302 DSG3P32926 999 aa15.37■□□□□ 0.05
PCDH18-207ENST00000617302 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
PCDH18-207ENST00000617302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.1■□□□□ 0.01
PCDH18-207ENST00000617302 HNRNPUL2Q1KMD3 747 aaKnown RBP15.1■□□□□ 0.01
PCDH18-207ENST00000617302 APLP2Q06481 763 aa15.09■□□□□ 0.01
PCDH18-207ENST00000617302 POTEHQ6S545 545 aa15.08■□□□□ 0
PCDH18-207ENST00000617302 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
PCDH18-207ENST00000617302 ABCB7O75027 752 aa15.07■□□□□ 0
PCDH18-207ENST00000617302 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
PCDH18-207ENST00000617302 MYCNP04198 464 aaPredicted RBP14.96□□□□□ -0.01
PCDH18-207ENST00000617302 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
PCDH18-207ENST00000617302 NISCHQ9Y2I1 1504 aa14.87□□□□□ -0.03
PCDH18-207ENST00000617302 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
PCDH18-207ENST00000617302 POLA2Q14181 598 aa14.74□□□□□ -0.05
PCDH18-207ENST00000617302 ATF5Q9Y2D1 282 aaPredicted RBP14.73□□□□□ -0.05
PCDH18-207ENST00000617302 ZBTB22O15209 634 aa14.69□□□□□ -0.06
PCDH18-207ENST00000617302 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
PCDH18-207ENST00000617302 ZBTB12Q9Y330 459 aaPredicted RBP14.36□□□□□ -0.11
PCDH18-207ENST00000617302 CHRDL2Q6WN34 429 aa14.34□□□□□ -0.11
PCDH18-207ENST00000617302 ATXN8OSP0DMR3 200 aa14.32□□□□□ -0.12
PCDH18-207ENST00000617302 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
PCDH18-207ENST00000617302 AKT1S1Q96B36 256 aa14.26□□□□□ -0.13
PCDH18-207ENST00000617302 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
PCDH18-207ENST00000617302 MKRN4PQ13434 485 aaPredicted RBP14.05□□□□□ -0.16
PCDH18-207ENST00000617302 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
PCDH18-207ENST00000617302 PIP4P2Q8N4L2 257 aa14.01□□□□□ -0.17
PCDH18-207ENST00000617302 FBLN2P98095 1184 aa13.99□□□□□ -0.17
PCDH18-207ENST00000617302 SPDYE2BA6NHP3 402 aa13.96□□□□□ -0.17
PCDH18-207ENST00000617302 SPDYE6P0CI01 402 aa13.96□□□□□ -0.17
PCDH18-207ENST00000617302 SPDYE2Q495Y8 402 aa13.96□□□□□ -0.17
PCDH18-207ENST00000617302 FXR2P51116 673 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDH18-207ENST00000617302 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
PCDH18-207ENST00000617302 SP7Q8TDD2 431 aaPredicted RBP13.88□□□□□ -0.19
PCDH18-207ENST00000617302 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
PCDH18-207ENST00000617302 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
PCDH18-207ENST00000617302 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
PCDH18-207ENST00000617302 HAX1O00165 279 aa13.7□□□□□ -0.22
PCDH18-207ENST00000617302 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
PCDH18-207ENST00000617302 EVX2Q03828 476 aa13.66□□□□□ -0.22
PCDH18-207ENST00000617302 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.22
PCDH18-207ENST00000617302 PRKAR2AP13861 404 aaKnown RBP13.64□□□□□ -0.23
PCDH18-207ENST00000617302 PABPN1Q86U42 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
PCDH18-207ENST00000617302 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
PCDH18-207ENST00000617302 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
PCDH18-207ENST00000617302 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
PCDH18-207ENST00000617302 GABBR2O75899 941 aa13.28□□□□□ -0.28
PCDH18-207ENST00000617302 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
PCDH18-207ENST00000617302 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
PCDH18-207ENST00000617302 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
PCDH18-207ENST00000617302 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
PCDH18-207ENST00000617302 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
PCDH18-207ENST00000617302 POTEIP0CG38 1075 aa13.06□□□□□ -0.32
PCDH18-207ENST00000617302 PROM2Q8N271 834 aa13.02□□□□□ -0.33
PCDH18-207ENST00000617302 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.33
PCDH18-207ENST00000617302 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
PCDH18-207ENST00000617302 CCDC180Q9P1Z9 1646 aa13□□□□□ -0.33
PCDH18-207ENST00000617302 LHX8Q68G74 356 aa12.99□□□□□ -0.33
PCDH18-207ENST00000617302 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
PCDH18-207ENST00000617302 CLCN6P51797 869 aa12.95□□□□□ -0.34
PCDH18-207ENST00000617302 GALR2O43603 387 aaPredicted RBP12.88□□□□□ -0.35
PCDH18-207ENST00000617302 PHF12Q96QT6 1004 aa12.86□□□□□ -0.35
PCDH18-207ENST00000617302 NPM1P06748 294 aaKnown RBP eCLIP12.83□□□□□ -0.36
PCDH18-207ENST00000617302 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
PCDH18-207ENST00000617302 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
PCDH18-207ENST00000617302 MS4A3Q96HJ5 214 aa12.68□□□□□ -0.38
PCDH18-207ENST00000617302 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
PCDH18-207ENST00000617302 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
PCDH18-207ENST00000617302 CCDC61Q9Y6R9 512 aa12.66□□□□□ -0.38
PCDH18-207ENST00000617302 POTEB2H3BUK9 544 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms