RNA–Protein interactions for RNA: ENST00000610948.1

LINC00467-204, long intergenic non-protein coding RNA 467, humanhuman

TSL 2

Gene LINC00467, Length 469 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00467-204ENST00000610948 AEBP2Q6ZN18 517 aaPredicted RBP27.53■■■□□ 2
LINC00467-204ENST00000610948 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
LINC00467-204ENST00000610948 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
LINC00467-204ENST00000610948 PHF23Q9BUL5 403 aaPredicted RBP23.18■■□□□ 1.3
LINC00467-204ENST00000610948 FOXD1Q16676 465 aa21.86■■□□□ 1.09
LINC00467-204ENST00000610948 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
LINC00467-204ENST00000610948 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
LINC00467-204ENST00000610948 ADRA2BP18089 450 aa20.51■□□□□ 0.87
LINC00467-204ENST00000610948 PIAS4Q8N2W9 510 aaPredicted RBP20.46■□□□□ 0.87
LINC00467-204ENST00000610948 MSH5O43196 834 aa20.38■□□□□ 0.85
LINC00467-204ENST00000610948 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
LINC00467-204ENST00000610948 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
LINC00467-204ENST00000610948 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
LINC00467-204ENST00000610948 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
LINC00467-204ENST00000610948 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
LINC00467-204ENST00000610948 CNKSR2Q8WXI2 1034 aa18.09■□□□□ 0.49
LINC00467-204ENST00000610948 HOXD11P31277 338 aaPredicted RBP17.97■□□□□ 0.47
LINC00467-204ENST00000610948 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
LINC00467-204ENST00000610948 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
LINC00467-204ENST00000610948 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
LINC00467-204ENST00000610948 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
LINC00467-204ENST00000610948 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
LINC00467-204ENST00000610948 RNF39Q9H2S5 420 aa17.4■□□□□ 0.38
LINC00467-204ENST00000610948 KCNA4P22459 653 aa17.36■□□□□ 0.37
LINC00467-204ENST00000610948 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
LINC00467-204ENST00000610948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.34
LINC00467-204ENST00000610948 C1QBPQ07021 282 aaKnown RBP17.15■□□□□ 0.34
LINC00467-204ENST00000610948 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
LINC00467-204ENST00000610948 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
LINC00467-204ENST00000610948 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
LINC00467-204ENST00000610948 CAPN15O75808 1086 aa16.51■□□□□ 0.23
LINC00467-204ENST00000610948 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
LINC00467-204ENST00000610948 DSG3P32926 999 aa16.36■□□□□ 0.21
LINC00467-204ENST00000610948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
LINC00467-204ENST00000610948 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
LINC00467-204ENST00000610948 APLP2Q06481 763 aa16.33■□□□□ 0.2
LINC00467-204ENST00000610948 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
LINC00467-204ENST00000610948 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
LINC00467-204ENST00000610948 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
LINC00467-204ENST00000610948 ZNF219Q9P2Y4 722 aaPredicted RBP16.22■□□□□ 0.19
LINC00467-204ENST00000610948 ABCB7O75027 752 aa16.15■□□□□ 0.18
LINC00467-204ENST00000610948 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
LINC00467-204ENST00000610948 ZBTB22O15209 634 aa15.95■□□□□ 0.14
LINC00467-204ENST00000610948 ATF5Q9Y2D1 282 aaPredicted RBP15.87■□□□□ 0.13
LINC00467-204ENST00000610948 POLA2Q14181 598 aa15.86■□□□□ 0.13
LINC00467-204ENST00000610948 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
LINC00467-204ENST00000610948 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
LINC00467-204ENST00000610948 ZBTB12Q9Y330 459 aaPredicted RBP15.52■□□□□ 0.08
LINC00467-204ENST00000610948 POTEHQ6S545 545 aa15.45■□□□□ 0.06
LINC00467-204ENST00000610948 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
LINC00467-204ENST00000610948 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
LINC00467-204ENST00000610948 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
LINC00467-204ENST00000610948 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
LINC00467-204ENST00000610948 FBLN2P98095 1184 aa15.23■□□□□ 0.03
LINC00467-204ENST00000610948 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
LINC00467-204ENST00000610948 REM2Q8IYK8 340 aaPredicted RBP15.14■□□□□ 0.01
LINC00467-204ENST00000610948 MKRN4PQ13434 485 aaPredicted RBP15.13■□□□□ 0.01
LINC00467-204ENST00000610948 SPDYE2BA6NHP3 402 aa15.06■□□□□ 0
LINC00467-204ENST00000610948 SPDYE6P0CI01 402 aa15.06■□□□□ 0
LINC00467-204ENST00000610948 SPDYE2Q495Y8 402 aa15.06■□□□□ 0
LINC00467-204ENST00000610948 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
LINC00467-204ENST00000610948 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
LINC00467-204ENST00000610948 PIP4P2Q8N4L2 257 aa14.88□□□□□ -0.03
LINC00467-204ENST00000610948 SSUH2Q9Y2M2 353 aa14.87□□□□□ -0.03
LINC00467-204ENST00000610948 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
LINC00467-204ENST00000610948 FXR2P51116 673 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC00467-204ENST00000610948 CLEC11AQ9Y240 323 aa14.79□□□□□ -0.04
LINC00467-204ENST00000610948 SPDYE1Q8NFV5 336 aaPredicted RBP14.78□□□□□ -0.04
LINC00467-204ENST00000610948 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
LINC00467-204ENST00000610948 HAX1O00165 279 aa14.6□□□□□ -0.07
LINC00467-204ENST00000610948 PRKAR2AP13861 404 aaKnown RBP14.6□□□□□ -0.07
LINC00467-204ENST00000610948 SP7Q8TDD2 431 aaPredicted RBP14.54□□□□□ -0.08
LINC00467-204ENST00000610948 PRR29P0C7W0 189 aa14.53□□□□□ -0.08
LINC00467-204ENST00000610948 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
LINC00467-204ENST00000610948 CHADLQ6NUI6 762 aa14.49□□□□□ -0.09
LINC00467-204ENST00000610948 EVX2Q03828 476 aa14.42□□□□□ -0.1
LINC00467-204ENST00000610948 C19orf67A6NJJ6 358 aa14.32□□□□□ -0.12
LINC00467-204ENST00000610948 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
LINC00467-204ENST00000610948 FARP1Q9Y4F1 1045 aaPredicted RBP14.25□□□□□ -0.13
LINC00467-204ENST00000610948 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
LINC00467-204ENST00000610948 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
LINC00467-204ENST00000610948 PROM2Q8N271 834 aa14.13□□□□□ -0.15
LINC00467-204ENST00000610948 GABBR2O75899 941 aa14.1□□□□□ -0.15
LINC00467-204ENST00000610948 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
LINC00467-204ENST00000610948 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.17
LINC00467-204ENST00000610948 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC00467-204ENST00000610948 FKBP8Q14318 412 aa13.93□□□□□ -0.18
LINC00467-204ENST00000610948 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
LINC00467-204ENST00000610948 PAK3O75914 559 aaPredicted RBP13.88□□□□□ -0.19
LINC00467-204ENST00000610948 CLCN6P51797 869 aa13.87□□□□□ -0.19
LINC00467-204ENST00000610948 MIER1Q8N108 512 aa13.83□□□□□ -0.2
LINC00467-204ENST00000610948 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
LINC00467-204ENST00000610948 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
LINC00467-204ENST00000610948 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
LINC00467-204ENST00000610948 GALR2O43603 387 aaPredicted RBP13.76□□□□□ -0.21
LINC00467-204ENST00000610948 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
LINC00467-204ENST00000610948 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
LINC00467-204ENST00000610948 TSPYL2Q9H2G4 693 aaPredicted RBP13.73□□□□□ -0.21
LINC00467-204ENST00000610948 LHX8Q68G74 356 aa13.65□□□□□ -0.22
LINC00467-204ENST00000610948 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms