RNA–Protein interactions for RNA: ENST00000606019.5

SEM1-212, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 1 (best)

Gene SEM1, Length 1,577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-212ENST00000606019 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
SEM1-212ENST00000606019 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
SEM1-212ENST00000606019 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
SEM1-212ENST00000606019 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.39
SEM1-212ENST00000606019 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
SEM1-212ENST00000606019 FOXD1Q16676 465 aa16.62■□□□□ 0.25
SEM1-212ENST00000606019 MSH5O43196 834 aa15.77■□□□□ 0.11
SEM1-212ENST00000606019 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
SEM1-212ENST00000606019 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
SEM1-212ENST00000606019 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
SEM1-212ENST00000606019 ADRA2BP18089 450 aa15.17■□□□□ 0.02
SEM1-212ENST00000606019 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
SEM1-212ENST00000606019 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
SEM1-212ENST00000606019 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
SEM1-212ENST00000606019 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
SEM1-212ENST00000606019 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
SEM1-212ENST00000606019 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
SEM1-212ENST00000606019 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
SEM1-212ENST00000606019 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
SEM1-212ENST00000606019 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
SEM1-212ENST00000606019 RNF216Q9NWF9 866 aaPredicted RBP13.2□□□□□ -0.3
SEM1-212ENST00000606019 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
SEM1-212ENST00000606019 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
SEM1-212ENST00000606019 POTEHQ6S545 545 aa12.99□□□□□ -0.33
SEM1-212ENST00000606019 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
SEM1-212ENST00000606019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
SEM1-212ENST00000606019 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
SEM1-212ENST00000606019 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
SEM1-212ENST00000606019 CAPN15O75808 1086 aa12.43□□□□□ -0.42
SEM1-212ENST00000606019 DSG3P32926 999 aa12.39□□□□□ -0.43
SEM1-212ENST00000606019 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
SEM1-212ENST00000606019 APLP2Q06481 763 aa12.17□□□□□ -0.46
SEM1-212ENST00000606019 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
SEM1-212ENST00000606019 ZNF219Q9P2Y4 722 aaPredicted RBP12.11□□□□□ -0.47
SEM1-212ENST00000606019 ABCB7O75027 752 aa12.09□□□□□ -0.47
SEM1-212ENST00000606019 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
SEM1-212ENST00000606019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.04□□□□□ -0.48
SEM1-212ENST00000606019 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
SEM1-212ENST00000606019 KCNA4P22459 653 aa11.96□□□□□ -0.49
SEM1-212ENST00000606019 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
SEM1-212ENST00000606019 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
SEM1-212ENST00000606019 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
SEM1-212ENST00000606019 POLA2Q14181 598 aa11.7□□□□□ -0.54
SEM1-212ENST00000606019 MYCNP04198 464 aaPredicted RBP11.67□□□□□ -0.54
SEM1-212ENST00000606019 NISCHQ9Y2I1 1504 aa11.63□□□□□ -0.55
SEM1-212ENST00000606019 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
SEM1-212ENST00000606019 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
SEM1-212ENST00000606019 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
SEM1-212ENST00000606019 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
SEM1-212ENST00000606019 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
SEM1-212ENST00000606019 ATF5Q9Y2D1 282 aaPredicted RBP11.35□□□□□ -0.59
SEM1-212ENST00000606019 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
SEM1-212ENST00000606019 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
SEM1-212ENST00000606019 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
SEM1-212ENST00000606019 HAX1O00165 279 aa11.32□□□□□ -0.6
SEM1-212ENST00000606019 PITPNM1O00562 1244 aa11.28□□□□□ -0.6
SEM1-212ENST00000606019 SLC4A1APQ9BWU0 796 aaKnown RBP11.27□□□□□ -0.61
SEM1-212ENST00000606019 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
SEM1-212ENST00000606019 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
SEM1-212ENST00000606019 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
SEM1-212ENST00000606019 SPDYE2Q495Y8 402 aa11.07□□□□□ -0.64
SEM1-212ENST00000606019 FBLN2P98095 1184 aa11.05□□□□□ -0.64
SEM1-212ENST00000606019 EVX2Q03828 476 aa11.05□□□□□ -0.64
SEM1-212ENST00000606019 ATXN8OSP0DMR3 200 aa11.02□□□□□ -0.65
SEM1-212ENST00000606019 PRKAR2AP13861 404 aaKnown RBP11□□□□□ -0.65
SEM1-212ENST00000606019 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
SEM1-212ENST00000606019 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
SEM1-212ENST00000606019 ZBTB22O15209 634 aa10.95□□□□□ -0.66
SEM1-212ENST00000606019 C19orf67A6NJJ6 358 aa10.9□□□□□ -0.67
SEM1-212ENST00000606019 ZNF692Q9BU19 519 aaPredicted RBP10.88□□□□□ -0.67
SEM1-212ENST00000606019 GABBR2O75899 941 aa10.84□□□□□ -0.67
SEM1-212ENST00000606019 SSUH2Q9Y2M2 353 aa10.84□□□□□ -0.67
SEM1-212ENST00000606019 MKRN4PQ13434 485 aaPredicted RBP10.81□□□□□ -0.68
SEM1-212ENST00000606019 LHX8Q68G74 356 aa10.81□□□□□ -0.68
SEM1-212ENST00000606019 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
SEM1-212ENST00000606019 PRR29P0C7W0 189 aa10.75□□□□□ -0.69
SEM1-212ENST00000606019 PABPN1Q86U42 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
SEM1-212ENST00000606019 EHMT2Q96KQ7 1210 aa10.67□□□□□ -0.7
SEM1-212ENST00000606019 CD44P16070 742 aaKnown RBP10.64□□□□□ -0.71
SEM1-212ENST00000606019 CLCN6P51797 869 aa10.6□□□□□ -0.71
SEM1-212ENST00000606019 FARP1Q9Y4F1 1045 aaPredicted RBP10.58□□□□□ -0.72
SEM1-212ENST00000606019 POTEIP0CG38 1075 aa10.56□□□□□ -0.72
SEM1-212ENST00000606019 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.72
SEM1-212ENST00000606019 ZNF579Q8NAF0 562 aaKnown RBP10.43□□□□□ -0.74
SEM1-212ENST00000606019 ZRANB1Q9UGI0 708 aa10.43□□□□□ -0.74
SEM1-212ENST00000606019 STAG3Q9UJ98 1225 aa10.37□□□□□ -0.75
SEM1-212ENST00000606019 CREBZFQ9NS37 354 aa10.34□□□□□ -0.75
SEM1-212ENST00000606019 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
SEM1-212ENST00000606019 GALR2O43603 387 aaPredicted RBP10.32□□□□□ -0.76
SEM1-212ENST00000606019 CSRNP3Q8WYN3 585 aa10.28□□□□□ -0.76
SEM1-212ENST00000606019 CCDC180Q9P1Z9 1646 aa10.28□□□□□ -0.76
SEM1-212ENST00000606019 OTUD5Q96G74 571 aa10.26□□□□□ -0.77
SEM1-212ENST00000606019 POTEMA6NI47 508 aa10.25□□□□□ -0.77
SEM1-212ENST00000606019 NPM1P06748 294 aaKnown RBP eCLIP10.22□□□□□ -0.77
SEM1-212ENST00000606019 PHF12Q96QT6 1004 aa10.22□□□□□ -0.77
SEM1-212ENST00000606019 PCDH10Q9P2E7 1040 aa10.21□□□□□ -0.78
SEM1-212ENST00000606019 POTEB2H3BUK9 544 aa10.2□□□□□ -0.78
SEM1-212ENST00000606019 SPDYE4A6NLX3 237 aa10.17□□□□□ -0.78
SEM1-212ENST00000606019 POTEGQ6S5H5 508 aa10.16□□□□□ -0.78
SEM1-212ENST00000606019 PELP1Q8IZL8 1130 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms