RNA–Protein interactions for RNA: ENST00000601133.5

FARP1-233, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-233ENST00000601133 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
FARP1-233ENST00000601133 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
FARP1-233ENST00000601133 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
FARP1-233ENST00000601133 PHF23Q9BUL5 403 aaPredicted RBP23.71■■□□□ 1.39
FARP1-233ENST00000601133 FOXD1Q16676 465 aa22.4■■□□□ 1.18
FARP1-233ENST00000601133 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
FARP1-233ENST00000601133 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
FARP1-233ENST00000601133 ADRA2BP18089 450 aa21.02■□□□□ 0.96
FARP1-233ENST00000601133 PIAS4Q8N2W9 510 aaPredicted RBP20.89■□□□□ 0.93
FARP1-233ENST00000601133 MSH5O43196 834 aa20.76■□□□□ 0.91
FARP1-233ENST00000601133 POTEDQ86YR6 584 aa20.19■□□□□ 0.82
FARP1-233ENST00000601133 MAPK8IP2Q13387 824 aaPredicted RBP19.31■□□□□ 0.68
FARP1-233ENST00000601133 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
FARP1-233ENST00000601133 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
FARP1-233ENST00000601133 PPP4R3CPQ6ZMV5 832 aa18.88■□□□□ 0.61
FARP1-233ENST00000601133 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
FARP1-233ENST00000601133 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
FARP1-233ENST00000601133 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
FARP1-233ENST00000601133 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
FARP1-233ENST00000601133 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
FARP1-233ENST00000601133 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
FARP1-233ENST00000601133 RNF39Q9H2S5 420 aa17.81■□□□□ 0.44
FARP1-233ENST00000601133 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
FARP1-233ENST00000601133 KCNA4P22459 653 aa17.77■□□□□ 0.44
FARP1-233ENST00000601133 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
FARP1-233ENST00000601133 C1QBPQ07021 282 aaKnown RBP17.48■□□□□ 0.39
FARP1-233ENST00000601133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.48■□□□□ 0.39
FARP1-233ENST00000601133 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
FARP1-233ENST00000601133 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
FARP1-233ENST00000601133 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
FARP1-233ENST00000601133 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
FARP1-233ENST00000601133 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
FARP1-233ENST00000601133 CAPN15O75808 1086 aa16.83■□□□□ 0.28
FARP1-233ENST00000601133 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
FARP1-233ENST00000601133 DSG3P32926 999 aa16.74■□□□□ 0.27
FARP1-233ENST00000601133 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
FARP1-233ENST00000601133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
FARP1-233ENST00000601133 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
FARP1-233ENST00000601133 SAMD1Q6SPF0 538 aaPredicted RBP16.53■□□□□ 0.24
FARP1-233ENST00000601133 ABCB7O75027 752 aa16.52■□□□□ 0.24
FARP1-233ENST00000601133 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
FARP1-233ENST00000601133 APLP2Q06481 763 aa16.5■□□□□ 0.23
FARP1-233ENST00000601133 ZNF219Q9P2Y4 722 aaPredicted RBP16.49■□□□□ 0.23
FARP1-233ENST00000601133 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
FARP1-233ENST00000601133 ZBTB22O15209 634 aa16.39■□□□□ 0.21
FARP1-233ENST00000601133 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
FARP1-233ENST00000601133 POLA2Q14181 598 aa16.2■□□□□ 0.18
FARP1-233ENST00000601133 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
FARP1-233ENST00000601133 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
FARP1-233ENST00000601133 POTEHQ6S545 545 aa15.8■□□□□ 0.12
FARP1-233ENST00000601133 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
FARP1-233ENST00000601133 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
FARP1-233ENST00000601133 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
FARP1-233ENST00000601133 CHRDL2Q6WN34 429 aa15.54■□□□□ 0.08
FARP1-233ENST00000601133 MKRN4PQ13434 485 aaPredicted RBP15.53■□□□□ 0.08
FARP1-233ENST00000601133 REM2Q8IYK8 340 aaPredicted RBP15.47■□□□□ 0.07
FARP1-233ENST00000601133 FBLN2P98095 1184 aa15.44■□□□□ 0.06
FARP1-233ENST00000601133 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
FARP1-233ENST00000601133 PITPNM1O00562 1244 aa15.32■□□□□ 0.04
FARP1-233ENST00000601133 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
FARP1-233ENST00000601133 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
FARP1-233ENST00000601133 PIP4P2Q8N4L2 257 aa15.23■□□□□ 0.03
FARP1-233ENST00000601133 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
FARP1-233ENST00000601133 SSUH2Q9Y2M2 353 aa15.19■□□□□ 0.02
FARP1-233ENST00000601133 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
FARP1-233ENST00000601133 FKBP8Q14318 412 aa15.14■□□□□ 0.01
FARP1-233ENST00000601133 RTN4Q9NQC3 1192 aaKnown RBP15.05■□□□□ -0
FARP1-233ENST00000601133 CLEC11AQ9Y240 323 aa15.05■□□□□ -0
FARP1-233ENST00000601133 SPDYE1Q8NFV5 336 aaPredicted RBP15.02■□□□□ -0
FARP1-233ENST00000601133 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
FARP1-233ENST00000601133 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
FARP1-233ENST00000601133 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
FARP1-233ENST00000601133 HAX1O00165 279 aa14.88□□□□□ -0.03
FARP1-233ENST00000601133 SLC24A1O60721 1099 aa14.86□□□□□ -0.03
FARP1-233ENST00000601133 SP7Q8TDD2 431 aaPredicted RBP14.86□□□□□ -0.03
FARP1-233ENST00000601133 EVX2Q03828 476 aa14.85□□□□□ -0.03
FARP1-233ENST00000601133 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
FARP1-233ENST00000601133 PRR29P0C7W0 189 aa14.78□□□□□ -0.04
FARP1-233ENST00000601133 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
FARP1-233ENST00000601133 NISCHQ9Y2I1 1504 aa14.76□□□□□ -0.05
FARP1-233ENST00000601133 C19orf67A6NJJ6 358 aa14.65□□□□□ -0.06
FARP1-233ENST00000601133 FARP1Q9Y4F1 1045 aaPredicted RBP14.55□□□□□ -0.08
FARP1-233ENST00000601133 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
FARP1-233ENST00000601133 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
FARP1-233ENST00000601133 PROM2Q8N271 834 aa14.44□□□□□ -0.1
FARP1-233ENST00000601133 CD44P16070 742 aaKnown RBP14.43□□□□□ -0.1
FARP1-233ENST00000601133 GABBR2O75899 941 aa14.42□□□□□ -0.1
FARP1-233ENST00000601133 MNX1P50219 401 aaPredicted RBP14.32□□□□□ -0.12
FARP1-233ENST00000601133 FBXO3Q9UK99 471 aa14.27□□□□□ -0.13
FARP1-233ENST00000601133 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
FARP1-233ENST00000601133 POTEIP0CG38 1075 aa14.19□□□□□ -0.14
FARP1-233ENST00000601133 ZNF579Q8NAF0 562 aaKnown RBP14.19□□□□□ -0.14
FARP1-233ENST00000601133 VASPP50552 380 aaPredicted RBP14.17□□□□□ -0.14
FARP1-233ENST00000601133 NPM1P06748 294 aaKnown RBP eCLIP14.12□□□□□ -0.15
FARP1-233ENST00000601133 PHF12Q96QT6 1004 aa14.12□□□□□ -0.15
FARP1-233ENST00000601133 GALR2O43603 387 aaPredicted RBP14.09□□□□□ -0.15
FARP1-233ENST00000601133 IFNLR1Q8IU57 520 aaPredicted RBP14.06□□□□□ -0.16
FARP1-233ENST00000601133 MIER1Q8N108 512 aa14.05□□□□□ -0.16
FARP1-233ENST00000601133 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
FARP1-233ENST00000601133 CLCN6P51797 869 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms