RNA–Protein interactions for RNA: ENST00000600160.2

UCA1-203, Transcript of urothelial cancer associated 1, humanhuman

TSL 2

Gene UCA1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-203ENST00000600160 AEBP2Q6ZN18 517 aaPredicted RBP23.92■■□□□ 1.42
UCA1-203ENST00000600160 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
UCA1-203ENST00000600160 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
UCA1-203ENST00000600160 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
UCA1-203ENST00000600160 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
UCA1-203ENST00000600160 FOXD1Q16676 465 aa19.29■□□□□ 0.68
UCA1-203ENST00000600160 MSH5O43196 834 aa18.51■□□□□ 0.55
UCA1-203ENST00000600160 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
UCA1-203ENST00000600160 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
UCA1-203ENST00000600160 ADRA2BP18089 450 aa17.21■□□□□ 0.35
UCA1-203ENST00000600160 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
UCA1-203ENST00000600160 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
UCA1-203ENST00000600160 DMRT2Q9Y5R5 561 aa16.23■□□□□ 0.19
UCA1-203ENST00000600160 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
UCA1-203ENST00000600160 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
UCA1-203ENST00000600160 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
UCA1-203ENST00000600160 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
UCA1-203ENST00000600160 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
UCA1-203ENST00000600160 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
UCA1-203ENST00000600160 POTEHQ6S545 545 aa15.11■□□□□ 0.01
UCA1-203ENST00000600160 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
UCA1-203ENST00000600160 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
UCA1-203ENST00000600160 PPP4R3CPQ6ZMV5 832 aa14.88□□□□□ -0.03
UCA1-203ENST00000600160 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
UCA1-203ENST00000600160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.085e-9■■□□□ 11.5
UCA1-203ENST00000600160 DSG3P32926 999 aa14.34□□□□□ -0.11
UCA1-203ENST00000600160 CAPN15O75808 1086 aa14.23□□□□□ -0.13
UCA1-203ENST00000600160 SPINK5Q9NQ38 1064 aaPredicted RBP14.15□□□□□ -0.14
UCA1-203ENST00000600160 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
UCA1-203ENST00000600160 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
UCA1-203ENST00000600160 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.2
UCA1-203ENST00000600160 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
UCA1-203ENST00000600160 APLP2Q06481 763 aa13.81□□□□□ -0.2
UCA1-203ENST00000600160 ZNF219Q9P2Y4 722 aaPredicted RBP13.8□□□□□ -0.2
UCA1-203ENST00000600160 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
UCA1-203ENST00000600160 ABCB7O75027 752 aa13.77□□□□□ -0.21
UCA1-203ENST00000600160 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
UCA1-203ENST00000600160 SP7Q8TDD2 431 aaPredicted RBP13.77□□□□□ -0.21
UCA1-203ENST00000600160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
UCA1-203ENST00000600160 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
UCA1-203ENST00000600160 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
UCA1-203ENST00000600160 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
UCA1-203ENST00000600160 HAX1O00165 279 aa13.26□□□□□ -0.29
UCA1-203ENST00000600160 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
UCA1-203ENST00000600160 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
UCA1-203ENST00000600160 POLA2Q14181 598 aa13.19□□□□□ -0.3
UCA1-203ENST00000600160 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
UCA1-203ENST00000600160 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.32
UCA1-203ENST00000600160 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
UCA1-203ENST00000600160 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
UCA1-203ENST00000600160 EVX2Q03828 476 aa12.92□□□□□ -0.34
UCA1-203ENST00000600160 NISCHQ9Y2I1 1504 aa12.92□□□□□ -0.34
UCA1-203ENST00000600160 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
UCA1-203ENST00000600160 LHX8Q68G74 356 aa12.89□□□□□ -0.35
UCA1-203ENST00000600160 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
UCA1-203ENST00000600160 PLSCR2Q9NRY7 297 aa12.8□□□□□ -0.36
UCA1-203ENST00000600160 KCNA4P22459 653 aa12.74□□□□□ -0.37
UCA1-203ENST00000600160 GABBR2O75899 941 aa12.67□□□□□ -0.38
UCA1-203ENST00000600160 C19orf67A6NJJ6 358 aa12.66□□□□□ -0.38
UCA1-203ENST00000600160 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
UCA1-203ENST00000600160 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
UCA1-203ENST00000600160 SPDYE2BA6NHP3 402 aa12.46□□□□□ -0.41
UCA1-203ENST00000600160 SPDYE6P0CI01 402 aa12.46□□□□□ -0.41
UCA1-203ENST00000600160 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
UCA1-203ENST00000600160 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
UCA1-203ENST00000600160 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
UCA1-203ENST00000600160 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
UCA1-203ENST00000600160 CLCN6P51797 869 aa12.31□□□□□ -0.44
UCA1-203ENST00000600160 FBLN2P98095 1184 aa12.25□□□□□ -0.45
UCA1-203ENST00000600160 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
UCA1-203ENST00000600160 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
UCA1-203ENST00000600160 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
UCA1-203ENST00000600160 POTEMA6NI47 508 aa12.18□□□□□ -0.46
UCA1-203ENST00000600160 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
UCA1-203ENST00000600160 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
UCA1-203ENST00000600160 PRR29P0C7W0 189 aa12.13□□□□□ -0.47
UCA1-203ENST00000600160 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
UCA1-203ENST00000600160 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
UCA1-203ENST00000600160 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
UCA1-203ENST00000600160 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
UCA1-203ENST00000600160 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
UCA1-203ENST00000600160 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
UCA1-203ENST00000600160 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
UCA1-203ENST00000600160 MKRN4PQ13434 485 aaPredicted RBP11.92□□□□□ -0.5
UCA1-203ENST00000600160 SLC4A1APQ9BWU0 796 aaKnown RBP11.91□□□□□ -0.5
UCA1-203ENST00000600160 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
UCA1-203ENST00000600160 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
UCA1-203ENST00000600160 ZRANB1Q9UGI0 708 aa11.86□□□□□ -0.51
UCA1-203ENST00000600160 GALR2O43603 387 aaPredicted RBP11.83□□□□□ -0.52
UCA1-203ENST00000600160 ABCC9O60706 1549 aa11.81□□□□□ -0.52
UCA1-203ENST00000600160 MAMSTRQ6ZN01 415 aa11.73□□□□□ -0.53
UCA1-203ENST00000600160 CCDC180Q9P1Z9 1646 aa11.68□□□□□ -0.54
UCA1-203ENST00000600160 LCE2DQ5TA82 110 aaPredicted RBP11.67□□□□□ -0.54
UCA1-203ENST00000600160 PAK3O75914 559 aaPredicted RBP11.66□□□□□ -0.54
UCA1-203ENST00000600160 ZBTB22O15209 634 aa11.65□□□□□ -0.54
UCA1-203ENST00000600160 METRNQ9UJH8 293 aa11.65□□□□□ -0.54
UCA1-203ENST00000600160 PELP1Q8IZL8 1130 aaKnown RBP11.64□□□□□ -0.55
UCA1-203ENST00000600160 FAM163AQ96GL9 167 aaPredicted RBP11.63□□□□□ -0.55
UCA1-203ENST00000600160 SLC39A7Q92504 469 aa11.62□□□□□ -0.55
UCA1-203ENST00000600160 C7P10643 843 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms