RNA–Protein interactions for RNA: ENST00000598934.5

LINC00854-210, Long intergenic non-protein coding RNA 854, human

TSL 5

Gene LINC00854, Length 337 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00854-210	ENST00000598934	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC00854-210	ENST00000598934	CHIC1	Q5VXU3	224 aa		12.8	□□□□□ -0.36
LINC00854-210	ENST00000598934	SENP3	Q9H4L4	574 aa	Predicted RBP	11.75	□□□□□ -0.53
LINC00854-210	ENST00000598934	PHF23	Q9BUL5	403 aa	Predicted RBP	11.52	□□□□□ -0.57
LINC00854-210	ENST00000598934	POTED	Q86YR6	584 aa		11.04	□□□□□ -0.64
LINC00854-210	ENST00000598934	FOXD1	Q16676	465 aa		10.96	□□□□□ -0.65
LINC00854-210	ENST00000598934	MSH5	O43196	834 aa		10.5	□□□□□ -0.73
LINC00854-210	ENST00000598934	PIAS4	Q8N2W9	510 aa	Predicted RBP	10.2	□□□□□ -0.78
LINC00854-210	ENST00000598934	PLPPR3	Q6T4P5	718 aa		10.01	□□□□□ -0.81
LINC00854-210	ENST00000598934	PPP6R1	Q9UPN7	881 aa		9.86	□□□□□ -0.83
LINC00854-210	ENST00000598934	ADRA2B	P18089	450 aa		9.84	□□□□□ -0.83
LINC00854-210	ENST00000598934	CACNB1	Q02641	598 aa	Predicted RBP	9.36	□□□□□ -0.91
LINC00854-210	ENST00000598934	DMRT2	Q9Y5R5	561 aa		9.2	□□□□□ -0.94
LINC00854-210	ENST00000598934	MAPK8IP2	Q13387	824 aa	Predicted RBP	9.18	□□□□□ -0.94
LINC00854-210	ENST00000598934	SCAF1	Q9H7N4	1312 aa	Known RBP	9.08	□□□□□ -0.96
LINC00854-210	ENST00000598934	KCNA4	P22459	653 aa		9.08	□□□□□ -0.96
LINC00854-210	ENST00000598934	EHMT2	Q96KQ7	1210 aa		9.07	□□□□□ -0.96
LINC00854-210	ENST00000598934	DCAF8L1	A6NGE4	600 aa		9	□□□□□ -0.97
LINC00854-210	ENST00000598934	PPP4R3CP	Q6ZMV5	832 aa		8.95	□□□□□ -0.98
LINC00854-210	ENST00000598934	RNF39	Q9H2S5	420 aa		8.86	□□□□□ -0.99
LINC00854-210	ENST00000598934	C1QBP	Q07021	282 aa	Known RBP	8.75	□□□□□ -1.01
LINC00854-210	ENST00000598934	CSRNP3	Q8WYN3	585 aa		8.7	□□□□□ -1.02
LINC00854-210	ENST00000598934	NPM3	O75607	178 aa	Known RBP	8.69	□□□□□ -1.02
LINC00854-210	ENST00000598934	SLC4A1AP	Q9BWU0	796 aa	Known RBP	8.66	□□□□□ -1.02
LINC00854-210	ENST00000598934	HOXD11	P31277	338 aa	Predicted RBP	8.65	□□□□□ -1.02
LINC00854-210	ENST00000598934	NCBP3	Q53F19	620 aa	Known RBP	8.59	□□□□□ -1.03
LINC00854-210	ENST00000598934	POTEH	Q6S545	545 aa		8.58	□□□□□ -1.04
LINC00854-210	ENST00000598934	CNKSR2	Q8WXI2	1034 aa		8.56	□□□□□ -1.04
LINC00854-210	ENST00000598934	RNF216	Q9NWF9	866 aa	Predicted RBP	8.49	□□□□□ -1.05
LINC00854-210	ENST00000598934	ZBTB22	O15209	634 aa		8.44	□□□□□ -1.06
LINC00854-210	ENST00000598934	DNAJC5B	Q9UF47	199 aa		8.43	□□□□□ -1.06
LINC00854-210	ENST00000598934	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	8.37	□□□□□ -1.07
LINC00854-210	ENST00000598934	SLC4A2	P04920	1241 aa		8.21	□□□□□ -1.1
LINC00854-210	ENST00000598934	SLC24A1	O60721	1099 aa		8.19	□□□□□ -1.1
LINC00854-210	ENST00000598934	CAPN15	O75808	1086 aa		8.18	□□□□□ -1.1
LINC00854-210	ENST00000598934	DSG3	P32926	999 aa		8.15	□□□□□ -1.1
LINC00854-210	ENST00000598934	FOXD4L1	Q9NU39	408 aa		8.15	□□□□□ -1.1
LINC00854-210	ENST00000598934	RTN4	Q9NQC3	1192 aa	Known RBP	8.1	□□□□□ -1.11
LINC00854-210	ENST00000598934	SPINK5	Q9NQ38	1064 aa	Predicted RBP	8.09	□□□□□ -1.11
LINC00854-210	ENST00000598934	AMER1	Q5JTC6	1135 aa	Predicted RBP	8.06	□□□□□ -1.12
LINC00854-210	ENST00000598934		U3KPZ7	1027 aa	Predicted RBP	8.03	□□□□□ -1.12
LINC00854-210	ENST00000598934	TRH	P20396	242 aa	Predicted RBP	7.93	□□□□□ -1.14
LINC00854-210	ENST00000598934	ABCB7	O75027	752 aa		7.92	□□□□□ -1.14
LINC00854-210	ENST00000598934	ATF5	Q9Y2D1	282 aa	Predicted RBP	7.92	□□□□□ -1.14
LINC00854-210	ENST00000598934	MYCN	P04198	464 aa	Predicted RBP	7.9	□□□□□ -1.14
LINC00854-210	ENST00000598934	APLP2	Q06481	763 aa		7.87	□□□□□ -1.15
LINC00854-210	ENST00000598934	RBM42	Q9BTD8	480 aa	Known RBP	7.86	□□□□□ -1.15
LINC00854-210	ENST00000598934	ZNF219	Q9P2Y4	722 aa	Predicted RBP	7.86	□□□□□ -1.15
LINC00854-210	ENST00000598934	CHRDL2	Q6WN34	429 aa		7.85	□□□□□ -1.15
LINC00854-210	ENST00000598934	FKBP8	Q14318	412 aa		7.83	□□□□□ -1.16
LINC00854-210	ENST00000598934	SP7	Q8TDD2	431 aa	Predicted RBP	7.82	□□□□□ -1.16
LINC00854-210	ENST00000598934	ATXN8OS	P0DMR3	200 aa		7.75	□□□□□ -1.17
LINC00854-210	ENST00000598934	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	7.73	□□□□□ -1.17
LINC00854-210	ENST00000598934	HNRNPUL2	Q1KMD3	747 aa	Known RBP	7.73	□□□□□ -1.17
LINC00854-210	ENST00000598934	SAMD1	Q6SPF0	538 aa	Predicted RBP	7.64	□□□□□ -1.19
LINC00854-210	ENST00000598934	HAX1	O00165	279 aa		7.62	□□□□□ -1.19
LINC00854-210	ENST00000598934	POLA2	Q14181	598 aa		7.57	□□□□□ -1.2
LINC00854-210	ENST00000598934	AKT1S1	Q96B36	256 aa		7.55	□□□□□ -1.2
LINC00854-210	ENST00000598934	MKRN4P	Q13434	485 aa	Predicted RBP	7.54	□□□□□ -1.2
LINC00854-210	ENST00000598934	PIP4P2	Q8N4L2	257 aa		7.53	□□□□□ -1.2
LINC00854-210	ENST00000598934	REM2	Q8IYK8	340 aa	Predicted RBP	7.46	□□□□□ -1.22
LINC00854-210	ENST00000598934	PLCB2	Q00722	1185 aa		7.43	□□□□□ -1.22
LINC00854-210	ENST00000598934	FXR2	P51116	673 aa	Known RBP eCLIP	7.39	□□□□□ -1.23
LINC00854-210	ENST00000598934	ZBTB12	Q9Y330	459 aa	Predicted RBP	7.39	□□□□□ -1.23
LINC00854-210	ENST00000598934	PITPNM1	O00562	1244 aa		7.38	□□□□□ -1.23
LINC00854-210	ENST00000598934	EVX2	Q03828	476 aa		7.37	□□□□□ -1.23
LINC00854-210	ENST00000598934	PLSCR2	Q9NRY7	297 aa		7.37	□□□□□ -1.23
LINC00854-210	ENST00000598934	FBXO3	Q9UK99	471 aa		7.36	□□□□□ -1.23
LINC00854-210	ENST00000598934	HAP1	P54257	671 aa	Predicted RBP	7.35	□□□□□ -1.23
LINC00854-210	ENST00000598934	LHX8	Q68G74	356 aa		7.35	□□□□□ -1.23
LINC00854-210	ENST00000598934	SPDYE4	A6NLX3	237 aa		7.33	□□□□□ -1.24
LINC00854-210	ENST00000598934	OSCAR	Q8IYS5	282 aa		7.33	□□□□□ -1.24
LINC00854-210	ENST00000598934	DCAF8L2	P0C7V8	631 aa		7.3	□□□□□ -1.24
LINC00854-210	ENST00000598934	PRKCSH	P14314	528 aa	Predicted RBP	7.3	□□□□□ -1.24
LINC00854-210	ENST00000598934	BCAN	Q96GW7	911 aa		7.29	□□□□□ -1.24
LINC00854-210	ENST00000598934	VASP	P50552	380 aa	Predicted RBP	7.27	□□□□□ -1.25
LINC00854-210	ENST00000598934	FBLN2	P98095	1184 aa		7.27	□□□□□ -1.25
LINC00854-210	ENST00000598934	PROM2	Q8N271	834 aa		7.27	□□□□□ -1.25
LINC00854-210	ENST00000598934	PRKAR2A	P13861	404 aa	Known RBP	7.23	□□□□□ -1.25
LINC00854-210	ENST00000598934	IFNLR1	Q8IU57	520 aa	Predicted RBP	7.23	□□□□□ -1.25
LINC00854-210	ENST00000598934	VSIG10	Q8N0Z9	540 aa		7.23	□□□□□ -1.25
LINC00854-210	ENST00000598934	TAOK2	Q9UL54	1235 aa		7.23	□□□□□ -1.25
LINC00854-210	ENST00000598934	GABBR2	O75899	941 aa		7.22	□□□□□ -1.25
LINC00854-210	ENST00000598934	PKD2	Q13563	968 aa		7.2	□□□□□ -1.26
LINC00854-210	ENST00000598934	CLEC11A	Q9Y240	323 aa		7.19	□□□□□ -1.26
LINC00854-210	ENST00000598934	C19orf67	A6NJJ6	358 aa		7.17	□□□□□ -1.26
LINC00854-210	ENST00000598934	TPRN	Q4KMQ1	711 aa		7.13	□□□□□ -1.27
LINC00854-210	ENST00000598934	KDM2A	Q9Y2K7	1162 aa		7.13	□□□□□ -1.27
LINC00854-210	ENST00000598934	SPDYE1	Q8NFV5	336 aa	Predicted RBP	7.12	□□□□□ -1.27
LINC00854-210	ENST00000598934	ZNF692	Q9BU19	519 aa	Predicted RBP	7.12	□□□□□ -1.27
LINC00854-210	ENST00000598934	SSUH2	Q9Y2M2	353 aa		7.12	□□□□□ -1.27
LINC00854-210	ENST00000598934	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	7.11	□□□□□ -1.27
LINC00854-210	ENST00000598934	SPDYE2B	A6NHP3	402 aa		7.1	□□□□□ -1.27
LINC00854-210	ENST00000598934	SPDYE6	P0CI01	402 aa		7.1	□□□□□ -1.27
LINC00854-210	ENST00000598934	SPDYE2	Q495Y8	402 aa		7.1	□□□□□ -1.27
LINC00854-210	ENST00000598934	BBX	Q8WY36	941 aa	Predicted RBP	7.1	□□□□□ -1.27
LINC00854-210	ENST00000598934	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	7.09	□□□□□ -1.27
LINC00854-210	ENST00000598934	NPM1	P06748	294 aa	Known RBP eCLIP	7.08	□□□□□ -1.28
LINC00854-210	ENST00000598934	PABPN1	Q86U42	306 aa	Known RBP eCLIP	7.08	□□□□□ -1.28
LINC00854-210	ENST00000598934	CFAP44	Q96MT7	982 aa		7.07	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms