RNA–Protein interactions for RNA: ENST00000590032.1

SEH1L-207, Transcript of SEH1 like nucleoporin, humanhuman

TSL 2

Gene SEH1L, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-207ENST00000590032 AEBP2Q6ZN18 517 aaPredicted RBP26.1■■□□□ 1.77
SEH1L-207ENST00000590032 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
SEH1L-207ENST00000590032 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
SEH1L-207ENST00000590032 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
SEH1L-207ENST00000590032 FOXD1Q16676 465 aa20.8■□□□□ 0.92
SEH1L-207ENST00000590032 PLPPR3Q6T4P5 718 aa19.7■□□□□ 0.74
SEH1L-207ENST00000590032 MSH5O43196 834 aa19.57■□□□□ 0.72
SEH1L-207ENST00000590032 PIAS4Q8N2W9 510 aaPredicted RBP19.4■□□□□ 0.7
SEH1L-207ENST00000590032 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
SEH1L-207ENST00000590032 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
SEH1L-207ENST00000590032 ADRA2BP18089 450 aa19.22■□□□□ 0.67
SEH1L-207ENST00000590032 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
SEH1L-207ENST00000590032 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
SEH1L-207ENST00000590032 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
SEH1L-207ENST00000590032 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
SEH1L-207ENST00000590032 HOXD11P31277 338 aaPredicted RBP16.97■□□□□ 0.31
SEH1L-207ENST00000590032 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
SEH1L-207ENST00000590032 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
SEH1L-207ENST00000590032 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
SEH1L-207ENST00000590032 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
SEH1L-207ENST00000590032 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
SEH1L-207ENST00000590032 RNF39Q9H2S5 420 aa16.66■□□□□ 0.26
SEH1L-207ENST00000590032 KCNA4P22459 653 aa16.62■□□□□ 0.25
SEH1L-207ENST00000590032 NPM3O75607 178 aaKnown RBP16.53■□□□□ 0.24
SEH1L-207ENST00000590032 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
SEH1L-207ENST00000590032 C1QBPQ07021 282 aaKnown RBP16.43■□□□□ 0.22
SEH1L-207ENST00000590032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.17
SEH1L-207ENST00000590032 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
SEH1L-207ENST00000590032 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
SEH1L-207ENST00000590032 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
SEH1L-207ENST00000590032 SLC4A2P04920 1241 aa15.63■□□□□ 0.09
SEH1L-207ENST00000590032 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
SEH1L-207ENST00000590032 CAPN15O75808 1086 aa15.58■□□□□ 0.08
SEH1L-207ENST00000590032 DSG3P32926 999 aa15.55■□□□□ 0.08
SEH1L-207ENST00000590032 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
SEH1L-207ENST00000590032 APLP2Q06481 763 aa15.38■□□□□ 0.05
SEH1L-207ENST00000590032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
SEH1L-207ENST00000590032 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
SEH1L-207ENST00000590032 MYCNP04198 464 aaPredicted RBP15.34■□□□□ 0.05
SEH1L-207ENST00000590032 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
SEH1L-207ENST00000590032 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
SEH1L-207ENST00000590032 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
SEH1L-207ENST00000590032 ZBTB22O15209 634 aa15.26■□□□□ 0.03
SEH1L-207ENST00000590032 SAMD1Q6SPF0 538 aaPredicted RBP15.26■□□□□ 0.03
SEH1L-207ENST00000590032 ABCB7O75027 752 aa15.19■□□□□ 0.02
SEH1L-207ENST00000590032 POTEHQ6S545 545 aa15.14■□□□□ 0.01
SEH1L-207ENST00000590032 ATXN8OSP0DMR3 200 aa14.96□□□□□ -0.01
SEH1L-207ENST00000590032 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
SEH1L-207ENST00000590032 POLA2Q14181 598 aa14.84□□□□□ -0.03
SEH1L-207ENST00000590032 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
SEH1L-207ENST00000590032 CHRDL2Q6WN34 429 aa14.57□□□□□ -0.08
SEH1L-207ENST00000590032 ZBTB12Q9Y330 459 aaPredicted RBP14.57□□□□□ -0.08
SEH1L-207ENST00000590032 SLC24A1O60721 1099 aa14.5□□□□□ -0.09
SEH1L-207ENST00000590032 AKT1S1Q96B36 256 aa14.48□□□□□ -0.09
SEH1L-207ENST00000590032 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
SEH1L-207ENST00000590032 FBLN2P98095 1184 aa14.34□□□□□ -0.11
SEH1L-207ENST00000590032 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
SEH1L-207ENST00000590032 AMER1Q5JTC6 1135 aaPredicted RBP14.3□□□□□ -0.12
SEH1L-207ENST00000590032 RTN4Q9NQC3 1192 aaKnown RBP14.29□□□□□ -0.12
SEH1L-207ENST00000590032 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
SEH1L-207ENST00000590032 PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
SEH1L-207ENST00000590032 PITPNM1O00562 1244 aa14.17□□□□□ -0.14
SEH1L-207ENST00000590032 SP7Q8TDD2 431 aaPredicted RBP14.12□□□□□ -0.15
SEH1L-207ENST00000590032 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
SEH1L-207ENST00000590032 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
SEH1L-207ENST00000590032 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
SEH1L-207ENST00000590032 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
SEH1L-207ENST00000590032 NISCHQ9Y2I1 1504 aa14.05□□□□□ -0.16
SEH1L-207ENST00000590032 HAX1O00165 279 aa13.96□□□□□ -0.17
SEH1L-207ENST00000590032 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
SEH1L-207ENST00000590032 SSUH2Q9Y2M2 353 aa13.92□□□□□ -0.18
SEH1L-207ENST00000590032 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
SEH1L-207ENST00000590032 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
SEH1L-207ENST00000590032 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
SEH1L-207ENST00000590032 FKBP8Q14318 412 aa13.83□□□□□ -0.2
SEH1L-207ENST00000590032 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
SEH1L-207ENST00000590032 EVX2Q03828 476 aa13.76□□□□□ -0.21
SEH1L-207ENST00000590032 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
SEH1L-207ENST00000590032 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
SEH1L-207ENST00000590032 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
SEH1L-207ENST00000590032 PROM2Q8N271 834 aa13.6□□□□□ -0.23
SEH1L-207ENST00000590032 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
SEH1L-207ENST00000590032 STAG3Q9UJ98 1225 aa13.55□□□□□ -0.24
SEH1L-207ENST00000590032 GABBR2O75899 941 aa13.47□□□□□ -0.25
SEH1L-207ENST00000590032 FARP1Q9Y4F1 1045 aaPredicted RBP13.4□□□□□ -0.26
SEH1L-207ENST00000590032 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
SEH1L-207ENST00000590032 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
SEH1L-207ENST00000590032 CLCN6P51797 869 aa13.27□□□□□ -0.29
SEH1L-207ENST00000590032 LHX8Q68G74 356 aa13.23□□□□□ -0.29
SEH1L-207ENST00000590032 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
SEH1L-207ENST00000590032 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
SEH1L-207ENST00000590032 PLEKHG5O94827 1062 aa13.16□□□□□ -0.3
SEH1L-207ENST00000590032 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
SEH1L-207ENST00000590032 PLCB2Q00722 1185 aa13.15□□□□□ -0.3
SEH1L-207ENST00000590032 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
SEH1L-207ENST00000590032 MIER1Q8N108 512 aa13.11□□□□□ -0.31
SEH1L-207ENST00000590032 PLCD3Q8N3E9 789 aa13.1□□□□□ -0.31
SEH1L-207ENST00000590032 DCBLD2Q96PD2 775 aa13.08□□□□□ -0.32
SEH1L-207ENST00000590032 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
SEH1L-207ENST00000590032 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms