RNA–Protein interactions for RNA: ENST00000587341.5

ZNF542P-209, Transcript of zinc finger protein 542, pseudogene, humanhuman

TSL 5

Gene ZNF542P, Length 1,076 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542P-209ENST00000587341 AEBP2Q6ZN18 517 aaPredicted RBP34.9■■■■□ 3.18
ZNF542P-209ENST00000587341 CHIC1Q5VXU3 224 aa33.42■■■□□ 2.94
ZNF542P-209ENST00000587341 SENP3Q9H4L4 574 aaPredicted RBP29.59■■■□□ 2.33
ZNF542P-209ENST00000587341 PHF23Q9BUL5 403 aaPredicted RBP29.39■■■□□ 2.3
ZNF542P-209ENST00000587341 FOXD1Q16676 465 aa27.63■■■□□ 2.01
ZNF542P-209ENST00000587341 PLPPR3Q6T4P5 718 aa26.82■■□□□ 1.88
ZNF542P-209ENST00000587341 PPP6R1Q9UPN7 881 aa26.15■■□□□ 1.78
ZNF542P-209ENST00000587341 ADRA2BP18089 450 aa26.06■■□□□ 1.76
ZNF542P-209ENST00000587341 PIAS4Q8N2W9 510 aaPredicted RBP25.85■■□□□ 1.73
ZNF542P-209ENST00000587341 MSH5O43196 834 aa25.6■■□□□ 1.69
ZNF542P-209ENST00000587341 POTEDQ86YR6 584 aa24.48■■□□□ 1.51
ZNF542P-209ENST00000587341 MAPK8IP2Q13387 824 aaPredicted RBP23.85■■□□□ 1.41
ZNF542P-209ENST00000587341 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
ZNF542P-209ENST00000587341 PPP4R3CPQ6ZMV5 832 aa23.6■■□□□ 1.37
ZNF542P-209ENST00000587341 DMRT2Q9Y5R5 561 aa23.56■■□□□ 1.36
ZNF542P-209ENST00000587341 CNKSR2Q8WXI2 1034 aa23.04■■□□□ 1.28
ZNF542P-209ENST00000587341 HOXD11P31277 338 aaPredicted RBP22.83■■□□□ 1.25
ZNF542P-209ENST00000587341 RNF216Q9NWF9 866 aaPredicted RBP22.74■■□□□ 1.23
ZNF542P-209ENST00000587341 NCBP3Q53F19 620 aaKnown RBP22.72■■□□□ 1.23
ZNF542P-209ENST00000587341 DCAF8L1A6NGE4 600 aa22.56■■□□□ 1.2
ZNF542P-209ENST00000587341 NPM3O75607 178 aaKnown RBP22.49■■□□□ 1.19
ZNF542P-209ENST00000587341 KCNA4P22459 653 aa22.41■■□□□ 1.18
ZNF542P-209ENST00000587341 RNF39Q9H2S5 420 aa21.94■■□□□ 1.1
ZNF542P-209ENST00000587341 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
ZNF542P-209ENST00000587341 CACNB1Q02641 598 aaPredicted RBP21.78■■□□□ 1.08
ZNF542P-209ENST00000587341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.72■■□□□ 1.07
ZNF542P-209ENST00000587341 C1QBPQ07021 282 aaKnown RBP21.6■■□□□ 1.05
ZNF542P-209ENST00000587341 SLC4A2P04920 1241 aa21.42■■□□□ 1.02
ZNF542P-209ENST00000587341 U3KPZ7 1027 aaPredicted RBP21.37■■□□□ 1.01
ZNF542P-209ENST00000587341 SLC4A1APQ9BWU0 796 aaKnown RBP21.16■□□□□ 0.98
ZNF542P-209ENST00000587341 SPINK5Q9NQ38 1064 aaPredicted RBP20.97■□□□□ 0.95
ZNF542P-209ENST00000587341 CAPN15O75808 1086 aa20.85■□□□□ 0.93
ZNF542P-209ENST00000587341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.76■□□□□ 0.91
ZNF542P-209ENST00000587341 HNRNPUL2Q1KMD3 747 aaKnown RBP20.76■□□□□ 0.91
ZNF542P-209ENST00000587341 MYCNP04198 464 aaPredicted RBP20.73■□□□□ 0.91
ZNF542P-209ENST00000587341 FOXD4L1Q9NU39 408 aa20.72■□□□□ 0.91
ZNF542P-209ENST00000587341 SAMD1Q6SPF0 538 aaPredicted RBP20.69■□□□□ 0.9
ZNF542P-209ENST00000587341 DSG3P32926 999 aa20.68■□□□□ 0.9
ZNF542P-209ENST00000587341 ZBTB22O15209 634 aa20.65■□□□□ 0.9
ZNF542P-209ENST00000587341 APLP2Q06481 763 aa20.65■□□□□ 0.9
ZNF542P-209ENST00000587341 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
ZNF542P-209ENST00000587341 ZNF219Q9P2Y4 722 aaPredicted RBP20.53■□□□□ 0.88
ZNF542P-209ENST00000587341 ABCB7O75027 752 aa20.45■□□□□ 0.86
ZNF542P-209ENST00000587341 ATF5Q9Y2D1 282 aaPredicted RBP20.35■□□□□ 0.85
ZNF542P-209ENST00000587341 POLA2Q14181 598 aa20.17■□□□□ 0.82
ZNF542P-209ENST00000587341 ATXN8OSP0DMR3 200 aa20.02■□□□□ 0.8
ZNF542P-209ENST00000587341 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
ZNF542P-209ENST00000587341 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
ZNF542P-209ENST00000587341 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
ZNF542P-209ENST00000587341 ZBTB12Q9Y330 459 aaPredicted RBP19.68■□□□□ 0.74
ZNF542P-209ENST00000587341 RBM42Q9BTD8 480 aaKnown RBP19.63■□□□□ 0.73
ZNF542P-209ENST00000587341 OSCARQ8IYS5 282 aa19.52■□□□□ 0.72
ZNF542P-209ENST00000587341 MKRN4PQ13434 485 aaPredicted RBP19.41■□□□□ 0.7
ZNF542P-209ENST00000587341 FBLN2P98095 1184 aa19.38■□□□□ 0.69
ZNF542P-209ENST00000587341 AKT1S1Q96B36 256 aa19.29■□□□□ 0.68
ZNF542P-209ENST00000587341 POTEHQ6S545 545 aa19.22■□□□□ 0.67
ZNF542P-209ENST00000587341 REM2Q8IYK8 340 aaPredicted RBP19.16■□□□□ 0.66
ZNF542P-209ENST00000587341 SPDYE2BA6NHP3 402 aa19.15■□□□□ 0.66
ZNF542P-209ENST00000587341 SPDYE6P0CI01 402 aa19.15■□□□□ 0.66
ZNF542P-209ENST00000587341 SPDYE2Q495Y8 402 aa19.15■□□□□ 0.66
ZNF542P-209ENST00000587341 CHRDL2Q6WN34 429 aa19.12■□□□□ 0.65
ZNF542P-209ENST00000587341 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
ZNF542P-209ENST00000587341 SSUH2Q9Y2M2 353 aa18.98■□□□□ 0.63
ZNF542P-209ENST00000587341 PITPNM1O00562 1244 aa18.96■□□□□ 0.63
ZNF542P-209ENST00000587341 PIP4P2Q8N4L2 257 aa18.78■□□□□ 0.6
ZNF542P-209ENST00000587341 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
ZNF542P-209ENST00000587341 FXR2P51116 673 aaKnown RBP eCLIP18.72■□□□□ 0.59
ZNF542P-209ENST00000587341 SPDYE1Q8NFV5 336 aaPredicted RBP18.72■□□□□ 0.59
ZNF542P-209ENST00000587341 CLEC11AQ9Y240 323 aa18.71■□□□□ 0.59
ZNF542P-209ENST00000587341 SPDYE4A6NLX3 237 aa18.61■□□□□ 0.57
ZNF542P-209ENST00000587341 PRKAR2AP13861 404 aaKnown RBP18.46■□□□□ 0.55
ZNF542P-209ENST00000587341 PRR29P0C7W0 189 aa18.43■□□□□ 0.54
ZNF542P-209ENST00000587341 CHADLQ6NUI6 762 aa18.37■□□□□ 0.53
ZNF542P-209ENST00000587341 HAX1O00165 279 aa18.31■□□□□ 0.52
ZNF542P-209ENST00000587341 PROM2Q8N271 834 aa18.25■□□□□ 0.51
ZNF542P-209ENST00000587341 STAG3Q9UJ98 1225 aa18.24■□□□□ 0.51
ZNF542P-209ENST00000587341 EVX2Q03828 476 aa18.21■□□□□ 0.51
ZNF542P-209ENST00000587341 SP7Q8TDD2 431 aaPredicted RBP18.18■□□□□ 0.5
ZNF542P-209ENST00000587341 CREBZFQ9NS37 354 aa18.12■□□□□ 0.49
ZNF542P-209ENST00000587341 C19orf67A6NJJ6 358 aa18.09■□□□□ 0.49
ZNF542P-209ENST00000587341 FARP1Q9Y4F1 1045 aaPredicted RBP18.09■□□□□ 0.49
ZNF542P-209ENST00000587341 FKBP8Q14318 412 aa18.07■□□□□ 0.48
ZNF542P-209ENST00000587341 CD44P16070 742 aaKnown RBP17.88■□□□□ 0.45
ZNF542P-209ENST00000587341 MNX1P50219 401 aaPredicted RBP17.88■□□□□ 0.45
ZNF542P-209ENST00000587341 GABBR2O75899 941 aa17.75■□□□□ 0.43
ZNF542P-209ENST00000587341 NPM1P06748 294 aaKnown RBP eCLIP17.7■□□□□ 0.42
ZNF542P-209ENST00000587341 MIER1Q8N108 512 aa17.7■□□□□ 0.42
ZNF542P-209ENST00000587341 ZRANB1Q9UGI0 708 aa17.69■□□□□ 0.42
ZNF542P-209ENST00000587341 ZNF579Q8NAF0 562 aaKnown RBP17.62■□□□□ 0.41
ZNF542P-209ENST00000587341 PLCD3Q8N3E9 789 aa17.59■□□□□ 0.41
ZNF542P-209ENST00000587341 PLEKHG5O94827 1062 aa17.56■□□□□ 0.4
ZNF542P-209ENST00000587341 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
ZNF542P-209ENST00000587341 PHF12Q96QT6 1004 aa17.51■□□□□ 0.39
ZNF542P-209ENST00000587341 FBXO3Q9UK99 471 aa17.51■□□□□ 0.39
ZNF542P-209ENST00000587341 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
ZNF542P-209ENST00000587341 CLCN6P51797 869 aa17.47■□□□□ 0.39
ZNF542P-209ENST00000587341 TSPYL2Q9H2G4 693 aaPredicted RBP17.47■□□□□ 0.39
ZNF542P-209ENST00000587341 GALR2O43603 387 aaPredicted RBP17.43■□□□□ 0.38
ZNF542P-209ENST00000587341 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
ZNF542P-209ENST00000587341 RASEFQ8IZ41 740 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms