RNA–Protein interactions for RNA: ENST00000585907.1

PRKAR1A-209, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-209ENST00000585907 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
PRKAR1A-209ENST00000585907 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
PRKAR1A-209ENST00000585907 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
PRKAR1A-209ENST00000585907 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
PRKAR1A-209ENST00000585907 FOXD1Q16676 465 aa18.96■□□□□ 0.63
PRKAR1A-209ENST00000585907 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
PRKAR1A-209ENST00000585907 MSH5O43196 834 aa17.84■□□□□ 0.45
PRKAR1A-209ENST00000585907 PIAS4Q8N2W9 510 aaPredicted RBP17.74■□□□□ 0.43
PRKAR1A-209ENST00000585907 PPP6R1Q9UPN7 881 aa17.67■□□□□ 0.42
PRKAR1A-209ENST00000585907 ADRA2BP18089 450 aa17.62■□□□□ 0.41
PRKAR1A-209ENST00000585907 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
PRKAR1A-209ENST00000585907 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
PRKAR1A-209ENST00000585907 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
PRKAR1A-209ENST00000585907 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
PRKAR1A-209ENST00000585907 PPP4R3CPQ6ZMV5 832 aa15.82■□□□□ 0.12
PRKAR1A-209ENST00000585907 CNKSR2Q8WXI2 1034 aa15.57■□□□□ 0.08
PRKAR1A-209ENST00000585907 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
PRKAR1A-209ENST00000585907 DCAF8L1A6NGE4 600 aa15.5■□□□□ 0.07
PRKAR1A-209ENST00000585907 RNF216Q9NWF9 866 aaPredicted RBP15.43■□□□□ 0.06
PRKAR1A-209ENST00000585907 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
PRKAR1A-209ENST00000585907 NCBP3Q53F19 620 aaKnown RBP15.27■□□□□ 0.04
PRKAR1A-209ENST00000585907 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
PRKAR1A-209ENST00000585907 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
PRKAR1A-209ENST00000585907 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
PRKAR1A-209ENST00000585907 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
PRKAR1A-209ENST00000585907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.04
PRKAR1A-209ENST00000585907 KCNA4P22459 653 aa14.62□□□□□ -0.07
PRKAR1A-209ENST00000585907 U3KPZ7 1027 aaPredicted RBP14.47□□□□□ -0.09
PRKAR1A-209ENST00000585907 CAPN15O75808 1086 aa14.28□□□□□ -0.12
PRKAR1A-209ENST00000585907 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
PRKAR1A-209ENST00000585907 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
PRKAR1A-209ENST00000585907 DSG3P32926 999 aa14.19□□□□□ -0.14
PRKAR1A-209ENST00000585907 APLP2Q06481 763 aa14.19□□□□□ -0.14
PRKAR1A-209ENST00000585907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
PRKAR1A-209ENST00000585907 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
PRKAR1A-209ENST00000585907 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
PRKAR1A-209ENST00000585907 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
PRKAR1A-209ENST00000585907 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
PRKAR1A-209ENST00000585907 ABCB7O75027 752 aa13.91□□□□□ -0.18
PRKAR1A-209ENST00000585907 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
PRKAR1A-209ENST00000585907 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
PRKAR1A-209ENST00000585907 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
PRKAR1A-209ENST00000585907 POTEHQ6S545 545 aa13.66□□□□□ -0.22
PRKAR1A-209ENST00000585907 POLA2Q14181 598 aa13.65□□□□□ -0.22
PRKAR1A-209ENST00000585907 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
PRKAR1A-209ENST00000585907 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
PRKAR1A-209ENST00000585907 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
PRKAR1A-209ENST00000585907 ZBTB22O15209 634 aa13.41□□□□□ -0.26
PRKAR1A-209ENST00000585907 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
PRKAR1A-209ENST00000585907 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
PRKAR1A-209ENST00000585907 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
PRKAR1A-209ENST00000585907 OSCARQ8IYS5 282 aa13.2□□□□□ -0.3
PRKAR1A-209ENST00000585907 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
PRKAR1A-209ENST00000585907 FBLN2P98095 1184 aa13.08□□□□□ -0.32
PRKAR1A-209ENST00000585907 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
PRKAR1A-209ENST00000585907 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
PRKAR1A-209ENST00000585907 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
PRKAR1A-209ENST00000585907 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
PRKAR1A-209ENST00000585907 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
PRKAR1A-209ENST00000585907 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
PRKAR1A-209ENST00000585907 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRKAR1A-209ENST00000585907 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
PRKAR1A-209ENST00000585907 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
PRKAR1A-209ENST00000585907 CSRNP3Q8WYN3 585 aa12.78□□□□□ -0.36
PRKAR1A-209ENST00000585907 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
PRKAR1A-209ENST00000585907 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
PRKAR1A-209ENST00000585907 HAX1O00165 279 aa12.74□□□□□ -0.37
PRKAR1A-209ENST00000585907 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
PRKAR1A-209ENST00000585907 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
PRKAR1A-209ENST00000585907 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRKAR1A-209ENST00000585907 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
PRKAR1A-209ENST00000585907 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
PRKAR1A-209ENST00000585907 EVX2Q03828 476 aa12.5□□□□□ -0.41
PRKAR1A-209ENST00000585907 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
PRKAR1A-209ENST00000585907 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
PRKAR1A-209ENST00000585907 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
PRKAR1A-209ENST00000585907 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
PRKAR1A-209ENST00000585907 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
PRKAR1A-209ENST00000585907 GABBR2O75899 941 aa12.28□□□□□ -0.44
PRKAR1A-209ENST00000585907 CD44P16070 742 aaKnown RBP12.24□□□□□ -0.45
PRKAR1A-209ENST00000585907 CLCN6P51797 869 aa12.17□□□□□ -0.46
PRKAR1A-209ENST00000585907 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
PRKAR1A-209ENST00000585907 ZRANB1Q9UGI0 708 aa12.06□□□□□ -0.48
PRKAR1A-209ENST00000585907 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
PRKAR1A-209ENST00000585907 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
PRKAR1A-209ENST00000585907 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
PRKAR1A-209ENST00000585907 LHX8Q68G74 356 aa12□□□□□ -0.49
PRKAR1A-209ENST00000585907 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
PRKAR1A-209ENST00000585907 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
PRKAR1A-209ENST00000585907 PROM2Q8N271 834 aa11.97□□□□□ -0.49
PRKAR1A-209ENST00000585907 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
PRKAR1A-209ENST00000585907 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
PRKAR1A-209ENST00000585907 PHF12Q96QT6 1004 aa11.85□□□□□ -0.51
PRKAR1A-209ENST00000585907 NISCHQ9Y2I1 1504 aa11.84□□□□□ -0.51
PRKAR1A-209ENST00000585907 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
PRKAR1A-209ENST00000585907 MIER1Q8N108 512 aa11.76□□□□□ -0.53
PRKAR1A-209ENST00000585907 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
PRKAR1A-209ENST00000585907 MS4A3Q96HJ5 214 aa11.7□□□□□ -0.54
PRKAR1A-209ENST00000585907 CCDC61Q9Y6R9 512 aa11.68□□□□□ -0.54
PRKAR1A-209ENST00000585907 PLCD3Q8N3E9 789 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms