RNA–Protein interactions for RNA: ENST00000585688.5

ZNF562-204, Transcript of zinc finger protein 562, humanhuman

TSL 2

Gene ZNF562, Length 1,475 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF562-204ENST00000585688 AEBP2Q6ZN18 517 aaPredicted RBP22.58■■□□□ 1.2
ZNF562-204ENST00000585688 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
ZNF562-204ENST00000585688 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
ZNF562-204ENST00000585688 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
ZNF562-204ENST00000585688 FOXD1Q16676 465 aa17.86■□□□□ 0.45
ZNF562-204ENST00000585688 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
ZNF562-204ENST00000585688 PPP6R1Q9UPN7 881 aa17.04■□□□□ 0.32
ZNF562-204ENST00000585688 ADRA2BP18089 450 aa17.02■□□□□ 0.32
ZNF562-204ENST00000585688 PIAS4Q8N2W9 510 aaPredicted RBP16.8■□□□□ 0.28
ZNF562-204ENST00000585688 MSH5O43196 834 aa16.57■□□□□ 0.24
ZNF562-204ENST00000585688 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
ZNF562-204ENST00000585688 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
ZNF562-204ENST00000585688 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
ZNF562-204ENST00000585688 MAPK8IP2Q13387 824 aaPredicted RBP15.5■□□□□ 0.07
ZNF562-204ENST00000585688 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
ZNF562-204ENST00000585688 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
ZNF562-204ENST00000585688 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
ZNF562-204ENST00000585688 KCNA4P22459 653 aa15□□□□□ -0.01
ZNF562-204ENST00000585688 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
ZNF562-204ENST00000585688 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
ZNF562-204ENST00000585688 NPM3O75607 178 aaKnown RBP14.89□□□□□ -0.03
ZNF562-204ENST00000585688 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
ZNF562-204ENST00000585688 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
ZNF562-204ENST00000585688 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.12
ZNF562-204ENST00000585688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■■■□ 20.4
ZNF562-204ENST00000585688 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
ZNF562-204ENST00000585688 SLC4A2P04920 1241 aa14.1□□□□□ -0.15
ZNF562-204ENST00000585688 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
ZNF562-204ENST00000585688 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.17
ZNF562-204ENST00000585688 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
ZNF562-204ENST00000585688 FOXD4L1Q9NU39 408 aa13.87□□□□□ -0.19
ZNF562-204ENST00000585688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
ZNF562-204ENST00000585688 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
ZNF562-204ENST00000585688 MYCNP04198 464 aaPredicted RBP13.77□□□□□ -0.21
ZNF562-204ENST00000585688 ZBTB22O15209 634 aa13.76□□□□□ -0.21
ZNF562-204ENST00000585688 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
ZNF562-204ENST00000585688 APLP2Q06481 763 aa13.68□□□□□ -0.22
ZNF562-204ENST00000585688 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
ZNF562-204ENST00000585688 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
ZNF562-204ENST00000585688 CAPN15O75808 1086 aa13.62□□□□□ -0.23
ZNF562-204ENST00000585688 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
ZNF562-204ENST00000585688 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
ZNF562-204ENST00000585688 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
ZNF562-204ENST00000585688 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
ZNF562-204ENST00000585688 DSG3P32926 999 aa13.41□□□□□ -0.26
ZNF562-204ENST00000585688 ATF5Q9Y2D1 282 aaPredicted RBP13.39□□□□□ -0.27
ZNF562-204ENST00000585688 ABCB7O75027 752 aa13.32□□□□□ -0.28
ZNF562-204ENST00000585688 POLA2Q14181 598 aa13.26□□□□□ -0.29
ZNF562-204ENST00000585688 NISCHQ9Y2I1 1504 aa13.16□□□□□ -0.3
ZNF562-204ENST00000585688 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
ZNF562-204ENST00000585688 FBLN2P98095 1184 aa12.91□□□□□ -0.34
ZNF562-204ENST00000585688 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
ZNF562-204ENST00000585688 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
ZNF562-204ENST00000585688 OSCARQ8IYS5 282 aa12.77□□□□□ -0.37
ZNF562-204ENST00000585688 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
ZNF562-204ENST00000585688 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
ZNF562-204ENST00000585688 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
ZNF562-204ENST00000585688 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
ZNF562-204ENST00000585688 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
ZNF562-204ENST00000585688 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
ZNF562-204ENST00000585688 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
ZNF562-204ENST00000585688 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
ZNF562-204ENST00000585688 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.43
ZNF562-204ENST00000585688 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
ZNF562-204ENST00000585688 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.44
ZNF562-204ENST00000585688 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
ZNF562-204ENST00000585688 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
ZNF562-204ENST00000585688 FKBP8Q14318 412 aa12.28□□□□□ -0.44
ZNF562-204ENST00000585688 PROM2Q8N271 834 aa12.19□□□□□ -0.46
ZNF562-204ENST00000585688 STAG3Q9UJ98 1225 aa12.19□□□□□ -0.46
ZNF562-204ENST00000585688 POTEHQ6S545 545 aa12.17□□□□□ -0.46
ZNF562-204ENST00000585688 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
ZNF562-204ENST00000585688 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
ZNF562-204ENST00000585688 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
ZNF562-204ENST00000585688 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
ZNF562-204ENST00000585688 ABCC9O60706 1549 aa11.98□□□□□ -0.49
ZNF562-204ENST00000585688 CHADLQ6NUI6 762 aa11.97□□□□□ -0.49
ZNF562-204ENST00000585688 CCDC180Q9P1Z9 1646 aa11.95□□□□□ -0.5
ZNF562-204ENST00000585688 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
ZNF562-204ENST00000585688 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
ZNF562-204ENST00000585688 MIER1Q8N108 512 aa11.89□□□□□ -0.51
ZNF562-204ENST00000585688 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
ZNF562-204ENST00000585688 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
ZNF562-204ENST00000585688 HAX1O00165 279 aa11.84□□□□□ -0.51
ZNF562-204ENST00000585688 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
ZNF562-204ENST00000585688 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
ZNF562-204ENST00000585688 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
ZNF562-204ENST00000585688 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
ZNF562-204ENST00000585688 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
ZNF562-204ENST00000585688 ZBTB47Q9UFB7 747 aaPredicted RBP11.72□□□□□ -0.53
ZNF562-204ENST00000585688 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
ZNF562-204ENST00000585688 EVX2Q03828 476 aa11.67□□□□□ -0.54
ZNF562-204ENST00000585688 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
ZNF562-204ENST00000585688 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
ZNF562-204ENST00000585688 SP7Q8TDD2 431 aaPredicted RBP11.61□□□□□ -0.55
ZNF562-204ENST00000585688 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
ZNF562-204ENST00000585688 IFNLR1Q8IU57 520 aaPredicted RBP11.57□□□□□ -0.56
ZNF562-204ENST00000585688 TSPYL2Q9H2G4 693 aaPredicted RBP11.55□□□□□ -0.56
ZNF562-204ENST00000585688 NUBP1P53384 320 aa11.54□□□□□ -0.56
ZNF562-204ENST00000585688 RASEFQ8IZ41 740 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms