RNA–Protein interactions for RNA: ENST00000584261.5

DDX42-218, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 510 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-218ENST00000584261 AEBP2Q6ZN18 517 aaPredicted RBP27.91■■■□□ 2.06
DDX42-218ENST00000584261 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
DDX42-218ENST00000584261 SENP3Q9H4L4 574 aaPredicted RBP23.82■■□□□ 1.4
DDX42-218ENST00000584261 PHF23Q9BUL5 403 aaPredicted RBP23.5■■□□□ 1.35
DDX42-218ENST00000584261 FOXD1Q16676 465 aa22.31■■□□□ 1.16
DDX42-218ENST00000584261 POTEDQ86YR6 584 aa21.33■■□□□ 1.01
DDX42-218ENST00000584261 MSH5O43196 834 aa21■□□□□ 0.95
DDX42-218ENST00000584261 PIAS4Q8N2W9 510 aaPredicted RBP20.72■□□□□ 0.91
DDX42-218ENST00000584261 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
DDX42-218ENST00000584261 PPP6R1Q9UPN7 881 aa20.54■□□□□ 0.88
DDX42-218ENST00000584261 ADRA2BP18089 450 aa20.44■□□□□ 0.86
DDX42-218ENST00000584261 MAPK8IP2Q13387 824 aaPredicted RBP18.94■□□□□ 0.62
DDX42-218ENST00000584261 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
DDX42-218ENST00000584261 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
DDX42-218ENST00000584261 CACNB1Q02641 598 aaPredicted RBP18.35■□□□□ 0.53
DDX42-218ENST00000584261 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
DDX42-218ENST00000584261 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
DDX42-218ENST00000584261 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
DDX42-218ENST00000584261 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
DDX42-218ENST00000584261 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
DDX42-218ENST00000584261 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
DDX42-218ENST00000584261 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
DDX42-218ENST00000584261 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
DDX42-218ENST00000584261 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
DDX42-218ENST00000584261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.335e-7■■□□□ 13.6
DDX42-218ENST00000584261 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
DDX42-218ENST00000584261 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
DDX42-218ENST00000584261 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
DDX42-218ENST00000584261 CAPN15O75808 1086 aa16.62■□□□□ 0.25
DDX42-218ENST00000584261 DSG3P32926 999 aa16.62■□□□□ 0.25
DDX42-218ENST00000584261 POTEHQ6S545 545 aa16.62■□□□□ 0.25
DDX42-218ENST00000584261 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
DDX42-218ENST00000584261 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
DDX42-218ENST00000584261 ABCB7O75027 752 aa16.2■□□□□ 0.18
DDX42-218ENST00000584261 KCNA4P22459 653 aa16.2■□□□□ 0.18
DDX42-218ENST00000584261 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
DDX42-218ENST00000584261 APLP2Q06481 763 aa16.12■□□□□ 0.17
DDX42-218ENST00000584261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
DDX42-218ENST00000584261 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
DDX42-218ENST00000584261 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
DDX42-218ENST00000584261 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
DDX42-218ENST00000584261 POLA2Q14181 598 aa15.71■□□□□ 0.11
DDX42-218ENST00000584261 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
DDX42-218ENST00000584261 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
DDX42-218ENST00000584261 AKT1S1Q96B36 256 aa15.38■□□□□ 0.05
DDX42-218ENST00000584261 ATF5Q9Y2D1 282 aaPredicted RBP15.37■□□□□ 0.05
DDX42-218ENST00000584261 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
DDX42-218ENST00000584261 REM2Q8IYK8 340 aaPredicted RBP15.27■□□□□ 0.04
DDX42-218ENST00000584261 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
DDX42-218ENST00000584261 PIP4P2Q8N4L2 257 aa15.24■□□□□ 0.03
DDX42-218ENST00000584261 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
DDX42-218ENST00000584261 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
DDX42-218ENST00000584261 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
DDX42-218ENST00000584261 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
DDX42-218ENST00000584261 HAX1O00165 279 aa15.1■□□□□ 0.01
DDX42-218ENST00000584261 FXR2P51116 673 aaKnown RBP eCLIP15.06■□□□□ 0
DDX42-218ENST00000584261 EVX2Q03828 476 aa14.91□□□□□ -0.02
DDX42-218ENST00000584261 ZBTB22O15209 634 aa14.9□□□□□ -0.02
DDX42-218ENST00000584261 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
DDX42-218ENST00000584261 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
DDX42-218ENST00000584261 SPDYE2Q495Y8 402 aa14.79□□□□□ -0.04
DDX42-218ENST00000584261 ATXN8OSP0DMR3 200 aa14.77□□□□□ -0.05
DDX42-218ENST00000584261 FBLN2P98095 1184 aa14.74□□□□□ -0.05
DDX42-218ENST00000584261 PRKAR2AP13861 404 aaKnown RBP14.72□□□□□ -0.05
DDX42-218ENST00000584261 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
DDX42-218ENST00000584261 SPDYE1Q8NFV5 336 aaPredicted RBP14.66□□□□□ -0.06
DDX42-218ENST00000584261 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
DDX42-218ENST00000584261 C19orf67A6NJJ6 358 aa14.6□□□□□ -0.07
DDX42-218ENST00000584261 NISCHQ9Y2I1 1504 aa14.6□□□□□ -0.07
DDX42-218ENST00000584261 ZNF692Q9BU19 519 aaPredicted RBP14.58□□□□□ -0.08
DDX42-218ENST00000584261 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
DDX42-218ENST00000584261 GABBR2O75899 941 aa14.51□□□□□ -0.09
DDX42-218ENST00000584261 CHADLQ6NUI6 762 aa14.48□□□□□ -0.09
DDX42-218ENST00000584261 LHX8Q68G74 356 aa14.41□□□□□ -0.1
DDX42-218ENST00000584261 PRR29P0C7W0 189 aa14.37□□□□□ -0.11
DDX42-218ENST00000584261 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
DDX42-218ENST00000584261 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
DDX42-218ENST00000584261 CD44P16070 742 aaKnown RBP14.21□□□□□ -0.13
DDX42-218ENST00000584261 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
DDX42-218ENST00000584261 CLCN6P51797 869 aa14.05□□□□□ -0.16
DDX42-218ENST00000584261 DCBLD2Q96PD2 775 aa14.01□□□□□ -0.17
DDX42-218ENST00000584261 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
DDX42-218ENST00000584261 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
DDX42-218ENST00000584261 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
DDX42-218ENST00000584261 PLSCR2Q9NRY7 297 aa13.88□□□□□ -0.19
DDX42-218ENST00000584261 GALR2O43603 387 aaPredicted RBP13.86□□□□□ -0.19
DDX42-218ENST00000584261 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
DDX42-218ENST00000584261 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
DDX42-218ENST00000584261 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
DDX42-218ENST00000584261 POTEB2H3BUK9 544 aa13.76□□□□□ -0.21
DDX42-218ENST00000584261 PHF12Q96QT6 1004 aa13.74□□□□□ -0.21
DDX42-218ENST00000584261 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
DDX42-218ENST00000584261 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
DDX42-218ENST00000584261 PELP1Q8IZL8 1130 aaKnown RBP13.65□□□□□ -0.22
DDX42-218ENST00000584261 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
DDX42-218ENST00000584261 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX42-218ENST00000584261 POTEMA6NI47 508 aa13.59□□□□□ -0.23
DDX42-218ENST00000584261 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
DDX42-218ENST00000584261 ASTLQ6HA08 431 aaPredicted RBP13.51□□□□□ -0.25
DDX42-218ENST00000584261 MS4A3Q96HJ5 214 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms