RNA–Protein interactions for RNA: ENST00000568400.5

TMEM87A-211, Transcript of transmembrane protein 87A, humanhuman

TSL 3

Gene TMEM87A, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-211ENST00000568400 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
TMEM87A-211ENST00000568400 CHIC1Q5VXU3 224 aa21.61■■□□□ 1.05
TMEM87A-211ENST00000568400 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
TMEM87A-211ENST00000568400 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
TMEM87A-211ENST00000568400 FOXD1Q16676 465 aa18.54■□□□□ 0.56
TMEM87A-211ENST00000568400 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
TMEM87A-211ENST00000568400 MSH5O43196 834 aa17.52■□□□□ 0.4
TMEM87A-211ENST00000568400 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
TMEM87A-211ENST00000568400 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
TMEM87A-211ENST00000568400 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
TMEM87A-211ENST00000568400 ADRA2BP18089 450 aa16.87■□□□□ 0.29
TMEM87A-211ENST00000568400 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
TMEM87A-211ENST00000568400 DMRT2Q9Y5R5 561 aa15.63■□□□□ 0.09
TMEM87A-211ENST00000568400 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
TMEM87A-211ENST00000568400 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
TMEM87A-211ENST00000568400 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
TMEM87A-211ENST00000568400 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
TMEM87A-211ENST00000568400 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
TMEM87A-211ENST00000568400 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
TMEM87A-211ENST00000568400 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
TMEM87A-211ENST00000568400 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
TMEM87A-211ENST00000568400 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
TMEM87A-211ENST00000568400 DNAJC5BQ9UF47 199 aa14.42□□□□□ -0.1
TMEM87A-211ENST00000568400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.14
TMEM87A-211ENST00000568400 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
TMEM87A-211ENST00000568400 POTEHQ6S545 545 aa13.98□□□□□ -0.17
TMEM87A-211ENST00000568400 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
TMEM87A-211ENST00000568400 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
TMEM87A-211ENST00000568400 DSG3P32926 999 aa13.8□□□□□ -0.2
TMEM87A-211ENST00000568400 CAPN15O75808 1086 aa13.77□□□□□ -0.21
TMEM87A-211ENST00000568400 SPINK5Q9NQ38 1064 aaPredicted RBP13.77□□□□□ -0.21
TMEM87A-211ENST00000568400 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
TMEM87A-211ENST00000568400 ABCB7O75027 752 aa13.42□□□□□ -0.26
TMEM87A-211ENST00000568400 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
TMEM87A-211ENST00000568400 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
TMEM87A-211ENST00000568400 APLP2Q06481 763 aa13.35□□□□□ -0.27
TMEM87A-211ENST00000568400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.22□□□□□ -0.29
TMEM87A-211ENST00000568400 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
TMEM87A-211ENST00000568400 KCNA4P22459 653 aa13.17□□□□□ -0.3
TMEM87A-211ENST00000568400 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
TMEM87A-211ENST00000568400 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
TMEM87A-211ENST00000568400 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
TMEM87A-211ENST00000568400 POLA2Q14181 598 aa12.95□□□□□ -0.34
TMEM87A-211ENST00000568400 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
TMEM87A-211ENST00000568400 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
TMEM87A-211ENST00000568400 AKT1S1Q96B36 256 aa12.76□□□□□ -0.37
TMEM87A-211ENST00000568400 PIP4P2Q8N4L2 257 aa12.68□□□□□ -0.38
TMEM87A-211ENST00000568400 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
TMEM87A-211ENST00000568400 ZBTB12Q9Y330 459 aaPredicted RBP12.63□□□□□ -0.39
TMEM87A-211ENST00000568400 ATF5Q9Y2D1 282 aaPredicted RBP12.6□□□□□ -0.39
TMEM87A-211ENST00000568400 HAX1O00165 279 aa12.58□□□□□ -0.4
TMEM87A-211ENST00000568400 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
TMEM87A-211ENST00000568400 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
TMEM87A-211ENST00000568400 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM87A-211ENST00000568400 FOXD4L1Q9NU39 408 aa12.42□□□□□ -0.42
TMEM87A-211ENST00000568400 EVX2Q03828 476 aa12.4□□□□□ -0.42
TMEM87A-211ENST00000568400 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
TMEM87A-211ENST00000568400 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
TMEM87A-211ENST00000568400 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
TMEM87A-211ENST00000568400 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
TMEM87A-211ENST00000568400 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
TMEM87A-211ENST00000568400 C19orf67A6NJJ6 358 aa12.14□□□□□ -0.47
TMEM87A-211ENST00000568400 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
TMEM87A-211ENST00000568400 FBLN2P98095 1184 aa12.12□□□□□ -0.47
TMEM87A-211ENST00000568400 SPDYE1Q8NFV5 336 aaPredicted RBP12.12□□□□□ -0.47
TMEM87A-211ENST00000568400 ZBTB22O15209 634 aa12.1□□□□□ -0.47
TMEM87A-211ENST00000568400 GABBR2O75899 941 aa12.08□□□□□ -0.48
TMEM87A-211ENST00000568400 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
TMEM87A-211ENST00000568400 LHX8Q68G74 356 aa12.06□□□□□ -0.48
TMEM87A-211ENST00000568400 MKRN4PQ13434 485 aaPredicted RBP11.99□□□□□ -0.49
TMEM87A-211ENST00000568400 SSUH2Q9Y2M2 353 aa11.99□□□□□ -0.49
TMEM87A-211ENST00000568400 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
TMEM87A-211ENST00000568400 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
TMEM87A-211ENST00000568400 PRR29P0C7W0 189 aa11.85□□□□□ -0.51
TMEM87A-211ENST00000568400 POTEIP0CG38 1075 aa11.83□□□□□ -0.52
TMEM87A-211ENST00000568400 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
TMEM87A-211ENST00000568400 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
TMEM87A-211ENST00000568400 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
TMEM87A-211ENST00000568400 PLSCR2Q9NRY7 297 aa11.71□□□□□ -0.53
TMEM87A-211ENST00000568400 CLCN6P51797 869 aa11.69□□□□□ -0.54
TMEM87A-211ENST00000568400 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
TMEM87A-211ENST00000568400 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
TMEM87A-211ENST00000568400 ZRANB1Q9UGI0 708 aa11.54□□□□□ -0.56
TMEM87A-211ENST00000568400 OTUD5Q96G74 571 aa11.49□□□□□ -0.57
TMEM87A-211ENST00000568400 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
TMEM87A-211ENST00000568400 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
TMEM87A-211ENST00000568400 POTEB2H3BUK9 544 aa11.43□□□□□ -0.58
TMEM87A-211ENST00000568400 POTEMA6NI47 508 aa11.39□□□□□ -0.59
TMEM87A-211ENST00000568400 NISCHQ9Y2I1 1504 aa11.36□□□□□ -0.59
TMEM87A-211ENST00000568400 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
TMEM87A-211ENST00000568400 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
TMEM87A-211ENST00000568400 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
TMEM87A-211ENST00000568400 POTEGQ6S5H5 508 aa11.33□□□□□ -0.6
TMEM87A-211ENST00000568400 PELP1Q8IZL8 1130 aaKnown RBP11.3□□□□□ -0.6
TMEM87A-211ENST00000568400 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
TMEM87A-211ENST00000568400 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
TMEM87A-211ENST00000568400 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
TMEM87A-211ENST00000568400 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
TMEM87A-211ENST00000568400 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
TMEM87A-211ENST00000568400 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms