RNA–Protein interactions for RNA: ENST00000561634.5

LINC01227-201, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 3

Gene LINC01227, Length 466 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-201ENST00000561634 AEBP2Q6ZN18 517 aaPredicted RBP35.63■■■■□ 3.29
LINC01227-201ENST00000561634 CHIC1Q5VXU3 224 aa35.04■■■■□ 3.2
LINC01227-201ENST00000561634 PHF23Q9BUL5 403 aaPredicted RBP30.84■■■□□ 2.53
LINC01227-201ENST00000561634 SENP3Q9H4L4 574 aaPredicted RBP30.19■■■□□ 2.42
LINC01227-201ENST00000561634 PLPPR3Q6T4P5 718 aa28.55■■■□□ 2.16
LINC01227-201ENST00000561634 FOXD1Q16676 465 aa27.98■■■□□ 2.07
LINC01227-201ENST00000561634 PPP6R1Q9UPN7 881 aa27.12■■□□□ 1.93
LINC01227-201ENST00000561634 ADRA2BP18089 450 aa27.08■■□□□ 1.93
LINC01227-201ENST00000561634 PIAS4Q8N2W9 510 aaPredicted RBP26.42■■□□□ 1.82
LINC01227-201ENST00000561634 MSH5O43196 834 aa25.72■■□□□ 1.71
LINC01227-201ENST00000561634 PPP4R3CPQ6ZMV5 832 aa25.17■■□□□ 1.62
LINC01227-201ENST00000561634 KCNA4P22459 653 aa24.86■■□□□ 1.57
LINC01227-201ENST00000561634 SCAF1Q9H7N4 1312 aaKnown RBP24.78■■□□□ 1.56
LINC01227-201ENST00000561634 NCBP3Q53F19 620 aaKnown RBP24.58■■□□□ 1.53
LINC01227-201ENST00000561634 MAPK8IP2Q13387 824 aaPredicted RBP24.49■■□□□ 1.51
LINC01227-201ENST00000561634 CNKSR2Q8WXI2 1034 aa24.43■■□□□ 1.5
LINC01227-201ENST00000561634 NPM3O75607 178 aaKnown RBP24.24■■□□□ 1.47
LINC01227-201ENST00000561634 DMRT2Q9Y5R5 561 aa24.15■■□□□ 1.46
LINC01227-201ENST00000561634 RNF216Q9NWF9 866 aaPredicted RBP23.91■■□□□ 1.42
LINC01227-201ENST00000561634 HOXD11P31277 338 aaPredicted RBP23.77■■□□□ 1.4
LINC01227-201ENST00000561634 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
LINC01227-201ENST00000561634 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
LINC01227-201ENST00000561634 EHMT2Q96KQ7 1210 aa23.26■■□□□ 1.31
LINC01227-201ENST00000561634 POTEDQ86YR6 584 aa22.98■■□□□ 1.27
LINC01227-201ENST00000561634 DCAF8L1A6NGE4 600 aa22.97■■□□□ 1.27
LINC01227-201ENST00000561634 CSRNP3Q8WYN3 585 aa22.96■■□□□ 1.27
LINC01227-201ENST00000561634 ZBTB22O15209 634 aa22.91■■□□□ 1.26
LINC01227-201ENST00000561634 SLC4A2P04920 1241 aa22.84■■□□□ 1.25
LINC01227-201ENST00000561634 FOXD4L1Q9NU39 408 aa22.83■■□□□ 1.25
LINC01227-201ENST00000561634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.56■■□□□ 1.2
LINC01227-201ENST00000561634 MYCNP04198 464 aaPredicted RBP22.39■■□□□ 1.17
LINC01227-201ENST00000561634 U3KPZ7 1027 aaPredicted RBP22.28■■□□□ 1.16
LINC01227-201ENST00000561634 RNF39Q9H2S5 420 aa22.08■■□□□ 1.13
LINC01227-201ENST00000561634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.07■■□□□ 1.12
LINC01227-201ENST00000561634 HNRNPUL2Q1KMD3 747 aaKnown RBP22.07■■□□□ 1.12
LINC01227-201ENST00000561634 ATXN8OSP0DMR3 200 aa22.04■■□□□ 1.12
LINC01227-201ENST00000561634 SAMD1Q6SPF0 538 aaPredicted RBP22.01■■□□□ 1.11
LINC01227-201ENST00000561634 C1QBPQ07021 282 aaKnown RBP21.82■■□□□ 1.08
LINC01227-201ENST00000561634 APLP2Q06481 763 aa21.78■■□□□ 1.08
LINC01227-201ENST00000561634 ATF5Q9Y2D1 282 aaPredicted RBP21.76■■□□□ 1.07
LINC01227-201ENST00000561634 SPINK5Q9NQ38 1064 aaPredicted RBP21.56■■□□□ 1.04
LINC01227-201ENST00000561634 ZNF219Q9P2Y4 722 aaPredicted RBP21.44■■□□□ 1.02
LINC01227-201ENST00000561634 CAPN15O75808 1086 aa21.43■■□□□ 1.02
LINC01227-201ENST00000561634 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
LINC01227-201ENST00000561634 CACNB1Q02641 598 aaPredicted RBP21.26■□□□□ 0.99
LINC01227-201ENST00000561634 POLA2Q14181 598 aa21.11■□□□□ 0.97
LINC01227-201ENST00000561634 DSG3P32926 999 aa21.07■□□□□ 0.96
LINC01227-201ENST00000561634 ABCB7O75027 752 aa21.04■□□□□ 0.96
LINC01227-201ENST00000561634 MKRN4PQ13434 485 aaPredicted RBP20.86■□□□□ 0.93
LINC01227-201ENST00000561634 ZBTB12Q9Y330 459 aaPredicted RBP20.83■□□□□ 0.93
LINC01227-201ENST00000561634 FBLN2P98095 1184 aa20.81■□□□□ 0.92
LINC01227-201ENST00000561634 FKBP8Q14318 412 aa20.69■□□□□ 0.9
LINC01227-201ENST00000561634 SPDYE4A6NLX3 237 aa20.46■□□□□ 0.87
LINC01227-201ENST00000561634 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
LINC01227-201ENST00000561634 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
LINC01227-201ENST00000561634 SPDYE2BA6NHP3 402 aa20.29■□□□□ 0.84
LINC01227-201ENST00000561634 SPDYE6P0CI01 402 aa20.29■□□□□ 0.84
LINC01227-201ENST00000561634 SPDYE2Q495Y8 402 aa20.29■□□□□ 0.84
LINC01227-201ENST00000561634 PROM2Q8N271 834 aa20.26■□□□□ 0.83
LINC01227-201ENST00000561634 ZNF692Q9BU19 519 aaPredicted RBP20.2■□□□□ 0.82
LINC01227-201ENST00000561634 SSUH2Q9Y2M2 353 aa20.19■□□□□ 0.82
LINC01227-201ENST00000561634 RBM42Q9BTD8 480 aaKnown RBP20.07■□□□□ 0.8
LINC01227-201ENST00000561634 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
LINC01227-201ENST00000561634 FBXO3Q9UK99 471 aa19.92■□□□□ 0.78
LINC01227-201ENST00000561634 AKT1S1Q96B36 256 aa19.89■□□□□ 0.77
LINC01227-201ENST00000561634 STAG3Q9UJ98 1225 aa19.69■□□□□ 0.74
LINC01227-201ENST00000561634 REM2Q8IYK8 340 aaPredicted RBP19.68■□□□□ 0.74
LINC01227-201ENST00000561634 VASPP50552 380 aaPredicted RBP19.65■□□□□ 0.74
LINC01227-201ENST00000561634 SPDYE1Q8NFV5 336 aaPredicted RBP19.61■□□□□ 0.73
LINC01227-201ENST00000561634 PITPNM1O00562 1244 aa19.45■□□□□ 0.7
LINC01227-201ENST00000561634 CLEC11AQ9Y240 323 aa19.44■□□□□ 0.7
LINC01227-201ENST00000561634 IFNLR1Q8IU57 520 aaPredicted RBP19.4■□□□□ 0.7
LINC01227-201ENST00000561634 PRR29P0C7W0 189 aa19.34■□□□□ 0.69
LINC01227-201ENST00000561634 MIER1Q8N108 512 aa19.34■□□□□ 0.69
LINC01227-201ENST00000561634 PLCD3Q8N3E9 789 aa19.34■□□□□ 0.69
LINC01227-201ENST00000561634 AMER1Q5JTC6 1135 aaPredicted RBP19.32■□□□□ 0.68
LINC01227-201ENST00000561634 RTN4Q9NQC3 1192 aaKnown RBP19.25■□□□□ 0.67
LINC01227-201ENST00000561634 PLEKHG5O94827 1062 aa19.22■□□□□ 0.67
LINC01227-201ENST00000561634 CREBZFQ9NS37 354 aa19.2■□□□□ 0.66
LINC01227-201ENST00000561634 KLHL34Q8N239 644 aa19.18■□□□□ 0.66
LINC01227-201ENST00000561634 ZBTB47Q9UFB7 747 aaPredicted RBP19.16■□□□□ 0.66
LINC01227-201ENST00000561634 CHRDL2Q6WN34 429 aa19.13■□□□□ 0.65
LINC01227-201ENST00000561634 SPOCK2Q92563 424 aa19.12■□□□□ 0.65
LINC01227-201ENST00000561634 MNX1P50219 401 aaPredicted RBP19.06■□□□□ 0.64
LINC01227-201ENST00000561634 FXR2P51116 673 aaKnown RBP eCLIP19.06■□□□□ 0.64
LINC01227-201ENST00000561634 CHADLQ6NUI6 762 aa18.97■□□□□ 0.63
LINC01227-201ENST00000561634 PRKAR2AP13861 404 aaKnown RBP18.94■□□□□ 0.62
LINC01227-201ENST00000561634 PIP4P2Q8N4L2 257 aa18.94■□□□□ 0.62
LINC01227-201ENST00000561634 NUBP1P53384 320 aa18.9■□□□□ 0.62
LINC01227-201ENST00000561634 PKD2Q13563 968 aa18.86■□□□□ 0.61
LINC01227-201ENST00000561634 FARP1Q9Y4F1 1045 aaPredicted RBP18.86■□□□□ 0.61
LINC01227-201ENST00000561634 NPM1P06748 294 aaKnown RBP eCLIP18.85■□□□□ 0.61
LINC01227-201ENST00000561634 RASEFQ8IZ41 740 aa18.74■□□□□ 0.59
LINC01227-201ENST00000561634 CIZ1Q9ULV3 898 aaPredicted RBP18.73■□□□□ 0.59
LINC01227-201ENST00000561634 GSE1Q14687 1217 aa18.72■□□□□ 0.59
LINC01227-201ENST00000561634 FAM212AQ96EL1 285 aa18.7■□□□□ 0.58
LINC01227-201ENST00000561634 DCAF8Q5TAQ9 597 aa18.66■□□□□ 0.58
LINC01227-201ENST00000561634 ECM2O94769 699 aaPredicted RBP18.65■□□□□ 0.58
LINC01227-201ENST00000561634 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
LINC01227-201ENST00000561634 TSPYL2Q9H2G4 693 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms