RNA–Protein interactions for RNA: ENST00000561136.1

TMOD3-209, Transcript of tropomodulin 3, humanhuman

TSL 3

Gene TMOD3, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-209ENST00000561136 AEBP2Q6ZN18 517 aaPredicted RBP26.2■■□□□ 1.78
TMOD3-209ENST00000561136 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.5
TMOD3-209ENST00000561136 SENP3Q9H4L4 574 aaPredicted RBP22.38■■□□□ 1.17
TMOD3-209ENST00000561136 PHF23Q9BUL5 403 aaPredicted RBP22.06■■□□□ 1.12
TMOD3-209ENST00000561136 FOXD1Q16676 465 aa20.95■□□□□ 0.94
TMOD3-209ENST00000561136 POTEDQ86YR6 584 aa20.1■□□□□ 0.81
TMOD3-209ENST00000561136 MSH5O43196 834 aa19.75■□□□□ 0.75
TMOD3-209ENST00000561136 PIAS4Q8N2W9 510 aaPredicted RBP19.48■□□□□ 0.71
TMOD3-209ENST00000561136 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
TMOD3-209ENST00000561136 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
TMOD3-209ENST00000561136 ADRA2BP18089 450 aa19.18■□□□□ 0.66
TMOD3-209ENST00000561136 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
TMOD3-209ENST00000561136 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
TMOD3-209ENST00000561136 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
TMOD3-209ENST00000561136 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
TMOD3-209ENST00000561136 DCAF8L1A6NGE4 600 aa17.08■□□□□ 0.32
TMOD3-209ENST00000561136 PPP4R3CPQ6ZMV5 832 aa16.87■□□□□ 0.29
TMOD3-209ENST00000561136 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
TMOD3-209ENST00000561136 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
TMOD3-209ENST00000561136 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
TMOD3-209ENST00000561136 RNF216Q9NWF9 866 aaPredicted RBP16.59■□□□□ 0.25
TMOD3-209ENST00000561136 C1QBPQ07021 282 aaKnown RBP16.53■□□□□ 0.24
TMOD3-209ENST00000561136 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.2
TMOD3-209ENST00000561136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
TMOD3-209ENST00000561136 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
TMOD3-209ENST00000561136 NPM3O75607 178 aaKnown RBP15.84■□□□□ 0.13
TMOD3-209ENST00000561136 U3KPZ7 1027 aaPredicted RBP15.69■□□□□ 0.1
TMOD3-209ENST00000561136 POTEHQ6S545 545 aa15.66■□□□□ 0.1
TMOD3-209ENST00000561136 CAPN15O75808 1086 aa15.64■□□□□ 0.09
TMOD3-209ENST00000561136 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
TMOD3-209ENST00000561136 DSG3P32926 999 aa15.61■□□□□ 0.09
TMOD3-209ENST00000561136 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
TMOD3-209ENST00000561136 ABCB7O75027 752 aa15.26■□□□□ 0.03
TMOD3-209ENST00000561136 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
TMOD3-209ENST00000561136 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
TMOD3-209ENST00000561136 APLP2Q06481 763 aa15.16■□□□□ 0.02
TMOD3-209ENST00000561136 KCNA4P22459 653 aa15.15■□□□□ 0.02
TMOD3-209ENST00000561136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
TMOD3-209ENST00000561136 HNRNPUL2Q1KMD3 747 aaKnown RBP15.05■□□□□ -0
TMOD3-209ENST00000561136 SAMD1Q6SPF0 538 aaPredicted RBP14.95□□□□□ -0.02
TMOD3-209ENST00000561136 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
TMOD3-209ENST00000561136 CHRDL2Q6WN34 429 aa14.78□□□□□ -0.04
TMOD3-209ENST00000561136 POLA2Q14181 598 aa14.74□□□□□ -0.05
TMOD3-209ENST00000561136 MYCNP04198 464 aaPredicted RBP14.64□□□□□ -0.07
TMOD3-209ENST00000561136 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
TMOD3-209ENST00000561136 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
TMOD3-209ENST00000561136 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
TMOD3-209ENST00000561136 ZBTB12Q9Y330 459 aaPredicted RBP14.35□□□□□ -0.11
TMOD3-209ENST00000561136 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
TMOD3-209ENST00000561136 PIP4P2Q8N4L2 257 aa14.33□□□□□ -0.12
TMOD3-209ENST00000561136 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
TMOD3-209ENST00000561136 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
TMOD3-209ENST00000561136 HAX1O00165 279 aa14.22□□□□□ -0.13
TMOD3-209ENST00000561136 PITPNM1O00562 1244 aa14.21□□□□□ -0.13
TMOD3-209ENST00000561136 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.13
TMOD3-209ENST00000561136 FXR2P51116 673 aaKnown RBP eCLIP14.14□□□□□ -0.15
TMOD3-209ENST00000561136 EVX2Q03828 476 aa14.01□□□□□ -0.17
TMOD3-209ENST00000561136 ZBTB22O15209 634 aa13.93□□□□□ -0.18
TMOD3-209ENST00000561136 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
TMOD3-209ENST00000561136 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
TMOD3-209ENST00000561136 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
TMOD3-209ENST00000561136 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
TMOD3-209ENST00000561136 FBLN2P98095 1184 aa13.84□□□□□ -0.19
TMOD3-209ENST00000561136 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
TMOD3-209ENST00000561136 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
TMOD3-209ENST00000561136 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
TMOD3-209ENST00000561136 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.21
TMOD3-209ENST00000561136 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
TMOD3-209ENST00000561136 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
TMOD3-209ENST00000561136 GABBR2O75899 941 aa13.65□□□□□ -0.22
TMOD3-209ENST00000561136 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
TMOD3-209ENST00000561136 CHADLQ6NUI6 762 aa13.62□□□□□ -0.23
TMOD3-209ENST00000561136 LHX8Q68G74 356 aa13.57□□□□□ -0.24
TMOD3-209ENST00000561136 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
TMOD3-209ENST00000561136 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
TMOD3-209ENST00000561136 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
TMOD3-209ENST00000561136 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
TMOD3-209ENST00000561136 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
TMOD3-209ENST00000561136 DCBLD2Q96PD2 775 aa13.2□□□□□ -0.3
TMOD3-209ENST00000561136 CLCN6P51797 869 aa13.18□□□□□ -0.3
TMOD3-209ENST00000561136 PLSCR2Q9NRY7 297 aa13.15□□□□□ -0.3
TMOD3-209ENST00000561136 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
TMOD3-209ENST00000561136 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
TMOD3-209ENST00000561136 CREBZFQ9NS37 354 aa13.04□□□□□ -0.32
TMOD3-209ENST00000561136 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
TMOD3-209ENST00000561136 NISCHQ9Y2I1 1504 aa12.95□□□□□ -0.34
TMOD3-209ENST00000561136 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
TMOD3-209ENST00000561136 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
TMOD3-209ENST00000561136 PHF12Q96QT6 1004 aa12.92□□□□□ -0.34
TMOD3-209ENST00000561136 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
TMOD3-209ENST00000561136 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
TMOD3-209ENST00000561136 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
TMOD3-209ENST00000561136 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
TMOD3-209ENST00000561136 POTEMA6NI47 508 aa12.81□□□□□ -0.36
TMOD3-209ENST00000561136 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
TMOD3-209ENST00000561136 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
TMOD3-209ENST00000561136 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
TMOD3-209ENST00000561136 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
TMOD3-209ENST00000561136 MS4A3Q96HJ5 214 aa12.71□□□□□ -0.37
TMOD3-209ENST00000561136 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms