RNA–Protein interactions for RNA: ENST00000559863.1

IRF9-206, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-206ENST00000559863 CHIC1Q5VXU3 224 aa36.03■■■■□ 3.36
IRF9-206ENST00000559863 AEBP2Q6ZN18 517 aaPredicted RBP34.96■■■■□ 3.19
IRF9-206ENST00000559863 PHF23Q9BUL5 403 aaPredicted RBP31.73■■■□□ 2.67
IRF9-206ENST00000559863 PLPPR3Q6T4P5 718 aa30.15■■■□□ 2.42
IRF9-206ENST00000559863 SENP3Q9H4L4 574 aaPredicted RBP29.65■■■□□ 2.34
IRF9-206ENST00000559863 EHMT2Q96KQ7 1210 aa28.26■■■□□ 2.11
IRF9-206ENST00000559863 KCNA4P22459 653 aa27.99■■■□□ 2.07
IRF9-206ENST00000559863 ADRA2BP18089 450 aa27.9■■■□□ 2.06
IRF9-206ENST00000559863 PPP6R1Q9UPN7 881 aa27.39■■□□□ 1.98
IRF9-206ENST00000559863 FOXD1Q16676 465 aa27.12■■□□□ 1.93
IRF9-206ENST00000559863 SLC4A1APQ9BWU0 796 aaKnown RBP27.1■■□□□ 1.93
IRF9-206ENST00000559863 CSRNP3Q8WYN3 585 aa27.08■■□□□ 1.93
IRF9-206ENST00000559863 NCBP3Q53F19 620 aaKnown RBP26.7■■□□□ 1.86
IRF9-206ENST00000559863 PPP4R3CPQ6ZMV5 832 aa26.7■■□□□ 1.86
IRF9-206ENST00000559863 PIAS4Q8N2W9 510 aaPredicted RBP26.11■■□□□ 1.77
IRF9-206ENST00000559863 NPM3O75607 178 aaKnown RBP26.08■■□□□ 1.77
IRF9-206ENST00000559863 SLC24A1O60721 1099 aa25.87■■□□□ 1.73
IRF9-206ENST00000559863 ZBTB22O15209 634 aa25.7■■□□□ 1.7
IRF9-206ENST00000559863 CNKSR2Q8WXI2 1034 aa25.64■■□□□ 1.7
IRF9-206ENST00000559863 AMER1Q5JTC6 1135 aaPredicted RBP25.53■■□□□ 1.68
IRF9-206ENST00000559863 SCAF1Q9H7N4 1312 aaKnown RBP25.49■■□□□ 1.67
IRF9-206ENST00000559863 FOXD4L1Q9NU39 408 aa25.4■■□□□ 1.66
IRF9-206ENST00000559863 RTN4Q9NQC3 1192 aaKnown RBP25.3■■□□□ 1.64
IRF9-206ENST00000559863 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
IRF9-206ENST00000559863 RNF216Q9NWF9 866 aaPredicted RBP24.7■■□□□ 1.54
IRF9-206ENST00000559863 MSH5O43196 834 aa24.54■■□□□ 1.52
IRF9-206ENST00000559863 FKBP8Q14318 412 aa24.46■■□□□ 1.51
IRF9-206ENST00000559863 ATXN8OSP0DMR3 200 aa24.45■■□□□ 1.5
IRF9-206ENST00000559863 MAPK8IP2Q13387 824 aaPredicted RBP24.39■■□□□ 1.49
IRF9-206ENST00000559863 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
IRF9-206ENST00000559863 MYCNP04198 464 aaPredicted RBP24.19■■□□□ 1.46
IRF9-206ENST00000559863 SLC4A2P04920 1241 aa24.13■■□□□ 1.45
IRF9-206ENST00000559863 HOXD11P31277 338 aaPredicted RBP24.08■■□□□ 1.45
IRF9-206ENST00000559863 DMRT2Q9Y5R5 561 aa23.88■■□□□ 1.41
IRF9-206ENST00000559863 PLCB2Q00722 1185 aa23.38■■□□□ 1.33
IRF9-206ENST00000559863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.32■■□□□ 1.32
IRF9-206ENST00000559863 HNRNPUL2Q1KMD3 747 aaKnown RBP23.32■■□□□ 1.32
IRF9-206ENST00000559863 FBXO3Q9UK99 471 aa23.31■■□□□ 1.32
IRF9-206ENST00000559863 SAMD1Q6SPF0 538 aaPredicted RBP23.25■■□□□ 1.31
IRF9-206ENST00000559863 ATF5Q9Y2D1 282 aaPredicted RBP23.16■■□□□ 1.3
IRF9-206ENST00000559863 BCANQ96GW7 911 aa23.08■■□□□ 1.29
IRF9-206ENST00000559863 HAP1P54257 671 aaPredicted RBP23.05■■□□□ 1.28
IRF9-206ENST00000559863 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.02■■□□□ 1.28
IRF9-206ENST00000559863 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
IRF9-206ENST00000559863 VSIG10Q8N0Z9 540 aa22.83■■□□□ 1.25
IRF9-206ENST00000559863 ABCC9O60706 1549 aa22.82■■□□□ 1.24
IRF9-206ENST00000559863 SPDYE4A6NLX3 237 aa22.8■■□□□ 1.24
IRF9-206ENST00000559863 DCAF8L1A6NGE4 600 aa22.78■■□□□ 1.24
IRF9-206ENST00000559863 VASPP50552 380 aaPredicted RBP22.78■■□□□ 1.24
IRF9-206ENST00000559863 ZNF219Q9P2Y4 722 aaPredicted RBP22.77■■□□□ 1.24
IRF9-206ENST00000559863 APLP2Q06481 763 aa22.72■■□□□ 1.23
IRF9-206ENST00000559863 TAOK2Q9UL54 1235 aa22.71■■□□□ 1.23
IRF9-206ENST00000559863 U3KPZ7 1027 aaPredicted RBP22.71■■□□□ 1.23
IRF9-206ENST00000559863 PROM2Q8N271 834 aa22.63■■□□□ 1.21
IRF9-206ENST00000559863 PRKCSHP14314 528 aaPredicted RBP22.6■■□□□ 1.21
IRF9-206ENST00000559863 IFNLR1Q8IU57 520 aaPredicted RBP22.51■■□□□ 1.19
IRF9-206ENST00000559863 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.49■■□□□ 1.19
IRF9-206ENST00000559863 PKD2Q13563 968 aa22.43■■□□□ 1.18
IRF9-206ENST00000559863 FBLN2P98095 1184 aa22.4■■□□□ 1.18
IRF9-206ENST00000559863 BBXQ8WY36 941 aaPredicted RBP22.36■■□□□ 1.17
IRF9-206ENST00000559863 TPRNQ4KMQ1 711 aa22.32■■□□□ 1.16
IRF9-206ENST00000559863 MKRN4PQ13434 485 aaPredicted RBP22.29■■□□□ 1.16
IRF9-206ENST00000559863 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
IRF9-206ENST00000559863 KDM2AQ9Y2K7 1162 aa22.17■■□□□ 1.14
IRF9-206ENST00000559863 PAXIP1Q6ZW49 1069 aaPredicted RBP22.16■■□□□ 1.14
IRF9-206ENST00000559863 SPOCK2Q92563 424 aa22.1■■□□□ 1.13
IRF9-206ENST00000559863 ECM2O94769 699 aaPredicted RBP22.09■■□□□ 1.13
IRF9-206ENST00000559863 CFAP44Q96MT7 982 aa22.09■■□□□ 1.13
IRF9-206ENST00000559863 KLHL34Q8N239 644 aa22.05■■□□□ 1.12
IRF9-206ENST00000559863 SPRYD3Q8NCJ5 442 aa21.98■■□□□ 1.11
IRF9-206ENST00000559863 NPM1P06748 294 aaKnown RBP eCLIP21.92■■□□□ 1.1
IRF9-206ENST00000559863 POLA2Q14181 598 aa21.81■■□□□ 1.08
IRF9-206ENST00000559863 ZBTB12Q9Y330 459 aaPredicted RBP21.81■■□□□ 1.08
IRF9-206ENST00000559863 STAG3Q9UJ98 1225 aa21.8■■□□□ 1.08
IRF9-206ENST00000559863 TRHP20396 242 aaPredicted RBP21.77■■□□□ 1.08
IRF9-206ENST00000559863 NBR1Q14596 966 aa21.77■■□□□ 1.08
IRF9-206ENST00000559863 TSHZ2Q9NRE2 1034 aa21.76■■□□□ 1.07
IRF9-206ENST00000559863 RGL2O15211 777 aa21.71■■□□□ 1.07
IRF9-206ENST00000559863 PLCD3Q8N3E9 789 aa21.67■■□□□ 1.06
IRF9-206ENST00000559863 ERICH6Q7L0X2 663 aa21.61■■□□□ 1.05
IRF9-206ENST00000559863 CHGAP10645 457 aaKnown RBP21.57■■□□□ 1.04
IRF9-206ENST00000559863 DNAJC5Q9H3Z4 198 aa21.55■■□□□ 1.04
IRF9-206ENST00000559863 SPINK5Q9NQ38 1064 aaPredicted RBP21.51■■□□□ 1.03
IRF9-206ENST00000559863 CAPN15O75808 1086 aa21.48■■□□□ 1.03
IRF9-206ENST00000559863 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
IRF9-206ENST00000559863 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
IRF9-206ENST00000559863 MIER1Q8N108 512 aa21.46■■□□□ 1.03
IRF9-206ENST00000559863 ZBTB47Q9UFB7 747 aaPredicted RBP21.45■■□□□ 1.02
IRF9-206ENST00000559863 PLEKHG5O94827 1062 aa21.42■■□□□ 1.02
IRF9-206ENST00000559863 CIZ1Q9ULV3 898 aaPredicted RBP21.42■■□□□ 1.02
IRF9-206ENST00000559863 ZNF692Q9BU19 519 aaPredicted RBP21.41■■□□□ 1.02
IRF9-206ENST00000559863 TIMELESSQ9UNS1 1208 aa21.4■■□□□ 1.02
IRF9-206ENST00000559863 TULP1O00294 542 aaPredicted RBP21.39■■□□□ 1.01
IRF9-206ENST00000559863 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
IRF9-206ENST00000559863 HS6ST3Q8IZP7 471 aa21.34■■□□□ 1.01
IRF9-206ENST00000559863 ARXQ96QS3 562 aa21.31■■□□□ 1
IRF9-206ENST00000559863 SPDYE2BA6NHP3 402 aa21.26■□□□□ 0.99
IRF9-206ENST00000559863 SPDYE6P0CI01 402 aa21.26■□□□□ 0.99
IRF9-206ENST00000559863 SPDYE2Q495Y8 402 aa21.26■□□□□ 0.99
IRF9-206ENST00000559863 SSUH2Q9Y2M2 353 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms