RNA–Protein interactions for RNA: ENST00000559736.5

LINS1-205, Transcript of lines homolog 1, humanhuman

TSL 3

Gene LINS1, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-205ENST00000559736 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
LINS1-205ENST00000559736 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
LINS1-205ENST00000559736 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
LINS1-205ENST00000559736 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
LINS1-205ENST00000559736 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
LINS1-205ENST00000559736 FOXD1Q16676 465 aa17.3■□□□□ 0.36
LINS1-205ENST00000559736 ADRA2BP18089 450 aa16.55■□□□□ 0.24
LINS1-205ENST00000559736 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
LINS1-205ENST00000559736 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
LINS1-205ENST00000559736 MSH5O43196 834 aa16.06■□□□□ 0.16
LINS1-205ENST00000559736 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
LINS1-205ENST00000559736 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
LINS1-205ENST00000559736 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
LINS1-205ENST00000559736 DMRT2Q9Y5R5 561 aa14.86□□□□□ -0.03
LINS1-205ENST00000559736 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
LINS1-205ENST00000559736 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
LINS1-205ENST00000559736 KCNA4P22459 653 aa14.75□□□□□ -0.05
LINS1-205ENST00000559736 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
LINS1-205ENST00000559736 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
LINS1-205ENST00000559736 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
LINS1-205ENST00000559736 HOXD11P31277 338 aaPredicted RBP14.5□□□□□ -0.09
LINS1-205ENST00000559736 DCAF8L1A6NGE4 600 aa14.32□□□□□ -0.12
LINS1-205ENST00000559736 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
LINS1-205ENST00000559736 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
LINS1-205ENST00000559736 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
LINS1-205ENST00000559736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINS1-205ENST00000559736 SLC4A2P04920 1241 aa13.75□□□□□ -0.21
LINS1-205ENST00000559736 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
LINS1-205ENST00000559736 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
LINS1-205ENST00000559736 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
LINS1-205ENST00000559736 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
LINS1-205ENST00000559736 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
LINS1-205ENST00000559736 ZBTB22O15209 634 aa13.54□□□□□ -0.24
LINS1-205ENST00000559736 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
LINS1-205ENST00000559736 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
LINS1-205ENST00000559736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
LINS1-205ENST00000559736 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
LINS1-205ENST00000559736 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
LINS1-205ENST00000559736 APLP2Q06481 763 aa13.38□□□□□ -0.27
LINS1-205ENST00000559736 NISCHQ9Y2I1 1504 aa13.28□□□□□ -0.28
LINS1-205ENST00000559736 CAPN15O75808 1086 aa13.27□□□□□ -0.29
LINS1-205ENST00000559736 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
LINS1-205ENST00000559736 TRHP20396 242 aaPredicted RBP13.18□□□□□ -0.3
LINS1-205ENST00000559736 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
LINS1-205ENST00000559736 ATXN8OSP0DMR3 200 aa13.15□□□□□ -0.3
LINS1-205ENST00000559736 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
LINS1-205ENST00000559736 DSG3P32926 999 aa13□□□□□ -0.33
LINS1-205ENST00000559736 ABCB7O75027 752 aa12.99□□□□□ -0.33
LINS1-205ENST00000559736 POLA2Q14181 598 aa12.9□□□□□ -0.34
LINS1-205ENST00000559736 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
LINS1-205ENST00000559736 FBLN2P98095 1184 aa12.65□□□□□ -0.38
LINS1-205ENST00000559736 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
LINS1-205ENST00000559736 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
LINS1-205ENST00000559736 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
LINS1-205ENST00000559736 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
LINS1-205ENST00000559736 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
LINS1-205ENST00000559736 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
LINS1-205ENST00000559736 FKBP8Q14318 412 aa12.32□□□□□ -0.44
LINS1-205ENST00000559736 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
LINS1-205ENST00000559736 SPDYE4A6NLX3 237 aa12.25□□□□□ -0.45
LINS1-205ENST00000559736 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
LINS1-205ENST00000559736 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
LINS1-205ENST00000559736 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
LINS1-205ENST00000559736 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
LINS1-205ENST00000559736 SPDYE1Q8NFV5 336 aaPredicted RBP12.03□□□□□ -0.48
LINS1-205ENST00000559736 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
LINS1-205ENST00000559736 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
LINS1-205ENST00000559736 CHRDL2Q6WN34 429 aa11.95□□□□□ -0.5
LINS1-205ENST00000559736 PROM2Q8N271 834 aa11.95□□□□□ -0.5
LINS1-205ENST00000559736 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
LINS1-205ENST00000559736 CCDC180Q9P1Z9 1646 aa11.89□□□□□ -0.51
LINS1-205ENST00000559736 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
LINS1-205ENST00000559736 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
LINS1-205ENST00000559736 FXR2P51116 673 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINS1-205ENST00000559736 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
LINS1-205ENST00000559736 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
LINS1-205ENST00000559736 POTEHQ6S545 545 aa11.68□□□□□ -0.54
LINS1-205ENST00000559736 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
LINS1-205ENST00000559736 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
LINS1-205ENST00000559736 PLCD3Q8N3E9 789 aa11.65□□□□□ -0.54
LINS1-205ENST00000559736 MIER1Q8N108 512 aa11.64□□□□□ -0.55
LINS1-205ENST00000559736 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
LINS1-205ENST00000559736 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
LINS1-205ENST00000559736 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
LINS1-205ENST00000559736 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
LINS1-205ENST00000559736 ABCC9O60706 1549 aa11.55□□□□□ -0.56
LINS1-205ENST00000559736 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
LINS1-205ENST00000559736 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
LINS1-205ENST00000559736 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINS1-205ENST00000559736 IFNLR1Q8IU57 520 aaPredicted RBP11.51□□□□□ -0.57
LINS1-205ENST00000559736 KLHL34Q8N239 644 aa11.48□□□□□ -0.57
LINS1-205ENST00000559736 HAX1O00165 279 aa11.46□□□□□ -0.57
LINS1-205ENST00000559736 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
LINS1-205ENST00000559736 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
LINS1-205ENST00000559736 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
LINS1-205ENST00000559736 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
LINS1-205ENST00000559736 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
LINS1-205ENST00000559736 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
LINS1-205ENST00000559736 NUBP1P53384 320 aa11.29□□□□□ -0.6
LINS1-205ENST00000559736 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms