RNA–Protein interactions for RNA: ENST00000558176.1

HMG20A-203, Transcript of high mobility group 20A, humanhuman

TSL 3

Gene HMG20A, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-203ENST00000558176 AEBP2Q6ZN18 517 aaPredicted RBP14.51□□□□□ -0.09
HMG20A-203ENST00000558176 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.25
HMG20A-203ENST00000558176 SENP3Q9H4L4 574 aaPredicted RBP12.48□□□□□ -0.41
HMG20A-203ENST00000558176 POTEDQ86YR6 584 aa12.35□□□□□ -0.43
HMG20A-203ENST00000558176 PHF23Q9BUL5 403 aaPredicted RBP12.2□□□□□ -0.46
HMG20A-203ENST00000558176 FOXD1Q16676 465 aa11.74□□□□□ -0.53
HMG20A-203ENST00000558176 MSH5O43196 834 aa11.27□□□□□ -0.61
HMG20A-203ENST00000558176 PIAS4Q8N2W9 510 aaPredicted RBP10.81□□□□□ -0.68
HMG20A-203ENST00000558176 PLPPR3Q6T4P5 718 aa10.64□□□□□ -0.71
HMG20A-203ENST00000558176 PPP6R1Q9UPN7 881 aa10.52□□□□□ -0.73
HMG20A-203ENST00000558176 ADRA2BP18089 450 aa10.48□□□□□ -0.73
HMG20A-203ENST00000558176 CACNB1Q02641 598 aaPredicted RBP10.18□□□□□ -0.78
HMG20A-203ENST00000558176 DMRT2Q9Y5R5 561 aa9.77□□□□□ -0.85
HMG20A-203ENST00000558176 MAPK8IP2Q13387 824 aaPredicted RBP9.71□□□□□ -0.86
HMG20A-203ENST00000558176 SCAF1Q9H7N4 1312 aaKnown RBP9.61□□□□□ -0.87
HMG20A-203ENST00000558176 RNF39Q9H2S5 420 aa9.55□□□□□ -0.88
HMG20A-203ENST00000558176 POTEHQ6S545 545 aa9.53□□□□□ -0.88
HMG20A-203ENST00000558176 DCAF8L1A6NGE4 600 aa9.47□□□□□ -0.89
HMG20A-203ENST00000558176 C1QBPQ07021 282 aaKnown RBP9.35□□□□□ -0.91
HMG20A-203ENST00000558176 PPP4R3CPQ6ZMV5 832 aa9.29□□□□□ -0.92
HMG20A-203ENST00000558176 HOXD11P31277 338 aaPredicted RBP9.25□□□□□ -0.93
HMG20A-203ENST00000558176 CNKSR2Q8WXI2 1034 aa9.17□□□□□ -0.94
HMG20A-203ENST00000558176 RNF216Q9NWF9 866 aaPredicted RBP9.13□□□□□ -0.95
HMG20A-203ENST00000558176 DNAJC5BQ9UF47 199 aa8.99□□□□□ -0.97
HMG20A-203ENST00000558176 NCBP3Q53F19 620 aaKnown RBP8.9□□□□□ -0.98
HMG20A-203ENST00000558176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.8□□□□□ -1
HMG20A-203ENST00000558176 NPM3O75607 178 aaKnown RBP8.76□□□□□ -1.01
HMG20A-203ENST00000558176 DSG3P32926 999 aa8.68□□□□□ -1.02
HMG20A-203ENST00000558176 U3KPZ7 1027 aaPredicted RBP8.6□□□□□ -1.03
HMG20A-203ENST00000558176 CAPN15O75808 1086 aa8.58□□□□□ -1.04
HMG20A-203ENST00000558176 SP7Q8TDD2 431 aaPredicted RBP8.56□□□□□ -1.04
HMG20A-203ENST00000558176 SPINK5Q9NQ38 1064 aaPredicted RBP8.55□□□□□ -1.04
HMG20A-203ENST00000558176 CHRDL2Q6WN34 429 aa8.45□□□□□ -1.06
HMG20A-203ENST00000558176 KCNA4P22459 653 aa8.42□□□□□ -1.06
HMG20A-203ENST00000558176 SLC4A2P04920 1241 aa8.4□□□□□ -1.06
HMG20A-203ENST00000558176 APLP2Q06481 763 aa8.37□□□□□ -1.07
HMG20A-203ENST00000558176 ZNF219Q9P2Y4 722 aaPredicted RBP8.34□□□□□ -1.07
HMG20A-203ENST00000558176 ABCB7O75027 752 aa8.33□□□□□ -1.08
HMG20A-203ENST00000558176 TRHP20396 242 aaPredicted RBP8.33□□□□□ -1.08
HMG20A-203ENST00000558176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.31□□□□□ -1.08
HMG20A-203ENST00000558176 HNRNPUL2Q1KMD3 747 aaKnown RBP8.31□□□□□ -1.08
HMG20A-203ENST00000558176 RBM42Q9BTD8 480 aaKnown RBP8.3□□□□□ -1.08
HMG20A-203ENST00000558176 SAMD1Q6SPF0 538 aaPredicted RBP8.26□□□□□ -1.09
HMG20A-203ENST00000558176 PLSCR2Q9NRY7 297 aa8.23□□□□□ -1.09
HMG20A-203ENST00000558176 HAX1O00165 279 aa8.15□□□□□ -1.1
HMG20A-203ENST00000558176 MYCNP04198 464 aaPredicted RBP8.11□□□□□ -1.11
HMG20A-203ENST00000558176 PIP4P2Q8N4L2 257 aa8.08□□□□□ -1.12
HMG20A-203ENST00000558176 POLA2Q14181 598 aa8.07□□□□□ -1.12
HMG20A-203ENST00000558176 NISCHQ9Y2I1 1504 aa8.06□□□□□ -1.12
HMG20A-203ENST00000558176 LHX8Q68G74 356 aa8.02□□□□□ -1.13
HMG20A-203ENST00000558176 EVX2Q03828 476 aa7.99□□□□□ -1.13
HMG20A-203ENST00000558176 AKT1S1Q96B36 256 aa7.93□□□□□ -1.14
HMG20A-203ENST00000558176 FOXD4L1Q9NU39 408 aa7.93□□□□□ -1.14
HMG20A-203ENST00000558176 SLC4A1APQ9BWU0 796 aaKnown RBP7.92□□□□□ -1.14
HMG20A-203ENST00000558176 ZBTB12Q9Y330 459 aaPredicted RBP7.92□□□□□ -1.14
HMG20A-203ENST00000558176 ATF5Q9Y2D1 282 aaPredicted RBP7.91□□□□□ -1.14
HMG20A-203ENST00000558176 REM2Q8IYK8 340 aaPredicted RBP7.88□□□□□ -1.15
HMG20A-203ENST00000558176 FXR2P51116 673 aaKnown RBP eCLIP7.87□□□□□ -1.15
HMG20A-203ENST00000558176 OSCARQ8IYS5 282 aa7.83□□□□□ -1.16
HMG20A-203ENST00000558176 PITPNM1O00562 1244 aa7.82□□□□□ -1.16
HMG20A-203ENST00000558176 GABBR2O75899 941 aa7.75□□□□□ -1.17
HMG20A-203ENST00000558176 ZBTB22O15209 634 aa7.73□□□□□ -1.17
HMG20A-203ENST00000558176 ATXN8OSP0DMR3 200 aa7.72□□□□□ -1.17
HMG20A-203ENST00000558176 SPDYE2BA6NHP3 402 aa7.66□□□□□ -1.18
HMG20A-203ENST00000558176 SPDYE6P0CI01 402 aa7.66□□□□□ -1.18
HMG20A-203ENST00000558176 SPDYE2Q495Y8 402 aa7.66□□□□□ -1.18
HMG20A-203ENST00000558176 C19orf67A6NJJ6 358 aa7.65□□□□□ -1.18
HMG20A-203ENST00000558176 FBLN2P98095 1184 aa7.65□□□□□ -1.18
HMG20A-203ENST00000558176 POTEMA6NI47 508 aa7.61□□□□□ -1.19
HMG20A-203ENST00000558176 PRKAR2AP13861 404 aaKnown RBP7.61□□□□□ -1.19
HMG20A-203ENST00000558176 POTEIP0CG38 1075 aa7.59□□□□□ -1.19
HMG20A-203ENST00000558176 SPDYE1Q8NFV5 336 aaPredicted RBP7.57□□□□□ -1.2
HMG20A-203ENST00000558176 POTEGQ6S5H5 508 aa7.56□□□□□ -1.2
HMG20A-203ENST00000558176 MKRN4PQ13434 485 aaPredicted RBP7.55□□□□□ -1.2
HMG20A-203ENST00000558176 CLEC11AQ9Y240 323 aa7.54□□□□□ -1.2
HMG20A-203ENST00000558176 ZNF692Q9BU19 519 aaPredicted RBP7.53□□□□□ -1.2
HMG20A-203ENST00000558176 SSUH2Q9Y2M2 353 aa7.53□□□□□ -1.2
HMG20A-203ENST00000558176 OTUD5Q96G74 571 aa7.45□□□□□ -1.22
HMG20A-203ENST00000558176 PCDH10Q9P2E7 1040 aa7.45□□□□□ -1.22
HMG20A-203ENST00000558176 CHADLQ6NUI6 762 aa7.41□□□□□ -1.22
HMG20A-203ENST00000558176 PABPN1Q86U42 306 aaKnown RBP eCLIP7.41□□□□□ -1.22
HMG20A-203ENST00000558176 PRR29P0C7W0 189 aa7.4□□□□□ -1.22
HMG20A-203ENST00000558176 ABCC9O60706 1549 aa7.39□□□□□ -1.23
HMG20A-203ENST00000558176 DCBLD2Q96PD2 775 aa7.39□□□□□ -1.23
HMG20A-203ENST00000558176 POTEB2H3BUK9 544 aa7.33□□□□□ -1.24
HMG20A-203ENST00000558176 CD44P16070 742 aaKnown RBP7.33□□□□□ -1.24
HMG20A-203ENST00000558176 FARP1Q9Y4F1 1045 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-203ENST00000558176 CLCN6P51797 869 aa7.29□□□□□ -1.24
HMG20A-203ENST00000558176 CCDC180Q9P1Z9 1646 aa7.24□□□□□ -1.25
HMG20A-203ENST00000558176 LCE2DQ5TA82 110 aaPredicted RBP7.24□□□□□ -1.25
HMG20A-203ENST00000558176 CSRNP3Q8WYN3 585 aa7.23□□□□□ -1.25
HMG20A-203ENST00000558176 ZNF579Q8NAF0 562 aaKnown RBP7.19□□□□□ -1.26
HMG20A-203ENST00000558176 STAG3Q9UJ98 1225 aa7.19□□□□□ -1.26
HMG20A-203ENST00000558176 FAM163AQ96GL9 167 aaPredicted RBP7.18□□□□□ -1.26
HMG20A-203ENST00000558176 CREBZFQ9NS37 354 aa7.17□□□□□ -1.26
HMG20A-203ENST00000558176 ZRANB1Q9UGI0 708 aa7.17□□□□□ -1.26
HMG20A-203ENST00000558176 GALR2O43603 387 aaPredicted RBP7.15□□□□□ -1.26
HMG20A-203ENST00000558176 SPDYE4A6NLX3 237 aa7.11□□□□□ -1.27
HMG20A-203ENST00000558176 CDAN1Q8IWY9 1227 aa7.11□□□□□ -1.27
HMG20A-203ENST00000558176 POTEJP0CG39 1038 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms