RNA–Protein interactions for RNA: ENST00000557193.1

NEMF-214, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-214ENST00000557193 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
NEMF-214ENST00000557193 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
NEMF-214ENST00000557193 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
NEMF-214ENST00000557193 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
NEMF-214ENST00000557193 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
NEMF-214ENST00000557193 FOXD1Q16676 465 aa20.64■□□□□ 0.89
NEMF-214ENST00000557193 ADRA2BP18089 450 aa20.11■□□□□ 0.81
NEMF-214ENST00000557193 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
NEMF-214ENST00000557193 PIAS4Q8N2W9 510 aaPredicted RBP19.58■□□□□ 0.72
NEMF-214ENST00000557193 MSH5O43196 834 aa18.99■□□□□ 0.63
NEMF-214ENST00000557193 PPP4R3CPQ6ZMV5 832 aa18.8■□□□□ 0.6
NEMF-214ENST00000557193 KCNA4P22459 653 aa18.68■□□□□ 0.58
NEMF-214ENST00000557193 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
NEMF-214ENST00000557193 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
NEMF-214ENST00000557193 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
NEMF-214ENST00000557193 MAPK8IP2Q13387 824 aaPredicted RBP18.13■□□□□ 0.49
NEMF-214ENST00000557193 NPM3O75607 178 aaKnown RBP18.1■□□□□ 0.49
NEMF-214ENST00000557193 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
NEMF-214ENST00000557193 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
NEMF-214ENST00000557193 RNF216Q9NWF9 866 aaPredicted RBP17.79■□□□□ 0.44
NEMF-214ENST00000557193 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
NEMF-214ENST00000557193 HOXD11P31277 338 aaPredicted RBP17.61■□□□□ 0.41
NEMF-214ENST00000557193 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
NEMF-214ENST00000557193 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
NEMF-214ENST00000557193 ZBTB22O15209 634 aa17.14■□□□□ 0.33
NEMF-214ENST00000557193 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
NEMF-214ENST00000557193 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
NEMF-214ENST00000557193 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
NEMF-214ENST00000557193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.297e-7■□□□□ 9.1
NEMF-214ENST00000557193 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
NEMF-214ENST00000557193 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
NEMF-214ENST00000557193 ATXN8OSP0DMR3 200 aa16.56■□□□□ 0.24
NEMF-214ENST00000557193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.54■□□□□ 0.24
NEMF-214ENST00000557193 HNRNPUL2Q1KMD3 747 aaKnown RBP16.54■□□□□ 0.24
NEMF-214ENST00000557193 U3KPZ7 1027 aaPredicted RBP16.52■□□□□ 0.24
NEMF-214ENST00000557193 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
NEMF-214ENST00000557193 APLP2Q06481 763 aa16.32■□□□□ 0.2
NEMF-214ENST00000557193 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
NEMF-214ENST00000557193 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
NEMF-214ENST00000557193 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
NEMF-214ENST00000557193 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
NEMF-214ENST00000557193 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
NEMF-214ENST00000557193 CAPN15O75808 1086 aa15.95■□□□□ 0.14
NEMF-214ENST00000557193 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
NEMF-214ENST00000557193 POLA2Q14181 598 aa15.75■□□□□ 0.11
NEMF-214ENST00000557193 FKBP8Q14318 412 aa15.69■□□□□ 0.1
NEMF-214ENST00000557193 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
NEMF-214ENST00000557193 FBLN2P98095 1184 aa15.64■□□□□ 0.09
NEMF-214ENST00000557193 ABCB7O75027 752 aa15.63■□□□□ 0.09
NEMF-214ENST00000557193 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
NEMF-214ENST00000557193 DSG3P32926 999 aa15.57■□□□□ 0.08
NEMF-214ENST00000557193 MKRN4PQ13434 485 aaPredicted RBP15.53■□□□□ 0.08
NEMF-214ENST00000557193 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
NEMF-214ENST00000557193 NISCHQ9Y2I1 1504 aa15.18■□□□□ 0.02
NEMF-214ENST00000557193 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
NEMF-214ENST00000557193 SPDYE2BA6NHP3 402 aa15.14■□□□□ 0.01
NEMF-214ENST00000557193 SPDYE6P0CI01 402 aa15.14■□□□□ 0.01
NEMF-214ENST00000557193 SPDYE2Q495Y8 402 aa15.14■□□□□ 0.01
NEMF-214ENST00000557193 PROM2Q8N271 834 aa15.14■□□□□ 0.01
NEMF-214ENST00000557193 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
NEMF-214ENST00000557193 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
NEMF-214ENST00000557193 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
NEMF-214ENST00000557193 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
NEMF-214ENST00000557193 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
NEMF-214ENST00000557193 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
NEMF-214ENST00000557193 VASPP50552 380 aaPredicted RBP14.84□□□□□ -0.03
NEMF-214ENST00000557193 STAG3Q9UJ98 1225 aa14.81□□□□□ -0.04
NEMF-214ENST00000557193 RTN4Q9NQC3 1192 aaKnown RBP14.77□□□□□ -0.05
NEMF-214ENST00000557193 AKT1S1Q96B36 256 aa14.76□□□□□ -0.05
NEMF-214ENST00000557193 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
NEMF-214ENST00000557193 SPDYE1Q8NFV5 336 aaPredicted RBP14.64□□□□□ -0.07
NEMF-214ENST00000557193 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
NEMF-214ENST00000557193 MIER1Q8N108 512 aa14.61□□□□□ -0.07
NEMF-214ENST00000557193 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
NEMF-214ENST00000557193 PLEKHG5O94827 1062 aa14.58□□□□□ -0.08
NEMF-214ENST00000557193 KLHL34Q8N239 644 aa14.58□□□□□ -0.08
NEMF-214ENST00000557193 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
NEMF-214ENST00000557193 SPOCK2Q92563 424 aa14.48□□□□□ -0.09
NEMF-214ENST00000557193 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
NEMF-214ENST00000557193 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
NEMF-214ENST00000557193 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
NEMF-214ENST00000557193 CREBZFQ9NS37 354 aa14.29□□□□□ -0.12
NEMF-214ENST00000557193 PKD2Q13563 968 aa14.26□□□□□ -0.13
NEMF-214ENST00000557193 CIZ1Q9ULV3 898 aaPredicted RBP14.2□□□□□ -0.14
NEMF-214ENST00000557193 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
NEMF-214ENST00000557193 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
NEMF-214ENST00000557193 MNX1P50219 401 aaPredicted RBP14.16□□□□□ -0.14
NEMF-214ENST00000557193 NUBP1P53384 320 aa14.14□□□□□ -0.15
NEMF-214ENST00000557193 GSE1Q14687 1217 aa14.14□□□□□ -0.15
NEMF-214ENST00000557193 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
NEMF-214ENST00000557193 CHRDL2Q6WN34 429 aa14.11□□□□□ -0.15
NEMF-214ENST00000557193 DCAF8Q5TAQ9 597 aa14.1□□□□□ -0.15
NEMF-214ENST00000557193 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
NEMF-214ENST00000557193 CHADLQ6NUI6 762 aa14.09□□□□□ -0.15
NEMF-214ENST00000557193 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
NEMF-214ENST00000557193 FAM212AQ96EL1 285 aa14.08□□□□□ -0.16
NEMF-214ENST00000557193 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
NEMF-214ENST00000557193 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
NEMF-214ENST00000557193 RASEFQ8IZ41 740 aa14□□□□□ -0.17
NEMF-214ENST00000557193 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms