RNA–Protein interactions for RNA: ENST00000556453.5

MLH3-211, Transcript of mutL homolog 3, humanhuman

TSL 5

Gene MLH3, Length 635 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-211ENST00000556453 AEBP2Q6ZN18 517 aaPredicted RBP16.32■□□□□ 0.2
MLH3-211ENST00000556453 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
MLH3-211ENST00000556453 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
MLH3-211ENST00000556453 PHF23Q9BUL5 403 aaPredicted RBP13.82□□□□□ -0.2
MLH3-211ENST00000556453 FOXD1Q16676 465 aa12.9□□□□□ -0.34
MLH3-211ENST00000556453 PLPPR3Q6T4P5 718 aa12.66□□□□□ -0.38
MLH3-211ENST00000556453 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
MLH3-211ENST00000556453 ADRA2BP18089 450 aa12.23□□□□□ -0.45
MLH3-211ENST00000556453 MSH5O43196 834 aa12.15□□□□□ -0.46
MLH3-211ENST00000556453 PIAS4Q8N2W9 510 aaPredicted RBP12.09□□□□□ -0.47
MLH3-211ENST00000556453 POTEDQ86YR6 584 aa11.69□□□□□ -0.54
MLH3-211ENST00000556453 MAPK8IP2Q13387 824 aaPredicted RBP11.16□□□□□ -0.62
MLH3-211ENST00000556453 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
MLH3-211ENST00000556453 PPP4R3CPQ6ZMV5 832 aa11.14□□□□□ -0.63
MLH3-211ENST00000556453 DMRT2Q9Y5R5 561 aa11.03□□□□□ -0.64
MLH3-211ENST00000556453 CNKSR2Q8WXI2 1034 aa10.86□□□□□ -0.67
MLH3-211ENST00000556453 NCBP3Q53F19 620 aaKnown RBP10.76□□□□□ -0.69
MLH3-211ENST00000556453 HOXD11P31277 338 aaPredicted RBP10.73□□□□□ -0.69
MLH3-211ENST00000556453 RNF216Q9NWF9 866 aaPredicted RBP10.7□□□□□ -0.7
MLH3-211ENST00000556453 KCNA4P22459 653 aa10.67□□□□□ -0.7
MLH3-211ENST00000556453 NPM3O75607 178 aaKnown RBP10.64□□□□□ -0.71
MLH3-211ENST00000556453 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
MLH3-211ENST00000556453 DNAJC5BQ9UF47 199 aa10.37□□□□□ -0.75
MLH3-211ENST00000556453 CACNB1Q02641 598 aaPredicted RBP10.34□□□□□ -0.75
MLH3-211ENST00000556453 RNF39Q9H2S5 420 aa10.32□□□□□ -0.76
MLH3-211ENST00000556453 C1QBPQ07021 282 aaKnown RBP10.21□□□□□ -0.77
MLH3-211ENST00000556453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.2□□□□□ -0.786e-6■□□□□ 8.2
MLH3-211ENST00000556453 SLC4A2P04920 1241 aa10.11□□□□□ -0.79
MLH3-211ENST00000556453 SLC4A1APQ9BWU0 796 aaKnown RBP10.11□□□□□ -0.79
MLH3-211ENST00000556453 U3KPZ7 1027 aaPredicted RBP10.04□□□□□ -0.8
MLH3-211ENST00000556453 FOXD4L1Q9NU39 408 aa9.86□□□□□ -0.83
MLH3-211ENST00000556453 ZBTB22O15209 634 aa9.83□□□□□ -0.84
MLH3-211ENST00000556453 MYCNP04198 464 aaPredicted RBP9.82□□□□□ -0.84
MLH3-211ENST00000556453 SPINK5Q9NQ38 1064 aaPredicted RBP9.82□□□□□ -0.84
MLH3-211ENST00000556453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.8□□□□□ -0.84
MLH3-211ENST00000556453 HNRNPUL2Q1KMD3 747 aaKnown RBP9.8□□□□□ -0.84
MLH3-211ENST00000556453 APLP2Q06481 763 aa9.77□□□□□ -0.85
MLH3-211ENST00000556453 SAMD1Q6SPF0 538 aaPredicted RBP9.77□□□□□ -0.85
MLH3-211ENST00000556453 CAPN15O75808 1086 aa9.76□□□□□ -0.85
MLH3-211ENST00000556453 TRHP20396 242 aaPredicted RBP9.67□□□□□ -0.86
MLH3-211ENST00000556453 DSG3P32926 999 aa9.67□□□□□ -0.86
MLH3-211ENST00000556453 ZNF219Q9P2Y4 722 aaPredicted RBP9.66□□□□□ -0.86
MLH3-211ENST00000556453 ATF5Q9Y2D1 282 aaPredicted RBP9.6□□□□□ -0.87
MLH3-211ENST00000556453 CSRNP3Q8WYN3 585 aa9.59□□□□□ -0.87
MLH3-211ENST00000556453 EHMT2Q96KQ7 1210 aa9.59□□□□□ -0.87
MLH3-211ENST00000556453 ABCB7O75027 752 aa9.57□□□□□ -0.88
MLH3-211ENST00000556453 ATXN8OSP0DMR3 200 aa9.52□□□□□ -0.89
MLH3-211ENST00000556453 POLA2Q14181 598 aa9.47□□□□□ -0.89
MLH3-211ENST00000556453 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
MLH3-211ENST00000556453 ZBTB12Q9Y330 459 aaPredicted RBP9.29□□□□□ -0.92
MLH3-211ENST00000556453 POTEHQ6S545 545 aa9.2□□□□□ -0.94
MLH3-211ENST00000556453 MKRN4PQ13434 485 aaPredicted RBP9.18□□□□□ -0.94
MLH3-211ENST00000556453 FBLN2P98095 1184 aa9.17□□□□□ -0.94
MLH3-211ENST00000556453 OSCARQ8IYS5 282 aa9.17□□□□□ -0.94
MLH3-211ENST00000556453 AKT1S1Q96B36 256 aa9.06□□□□□ -0.96
MLH3-211ENST00000556453 SPDYE2BA6NHP3 402 aa9.03□□□□□ -0.96
MLH3-211ENST00000556453 SPDYE6P0CI01 402 aa9.03□□□□□ -0.96
MLH3-211ENST00000556453 SPDYE2Q495Y8 402 aa9.03□□□□□ -0.96
MLH3-211ENST00000556453 CHRDL2Q6WN34 429 aa9.02□□□□□ -0.97
MLH3-211ENST00000556453 REM2Q8IYK8 340 aaPredicted RBP8.97□□□□□ -0.97
MLH3-211ENST00000556453 ZNF692Q9BU19 519 aaPredicted RBP8.96□□□□□ -0.98
MLH3-211ENST00000556453 SSUH2Q9Y2M2 353 aa8.96□□□□□ -0.98
MLH3-211ENST00000556453 PITPNM1O00562 1244 aa8.88□□□□□ -0.99
MLH3-211ENST00000556453 PABPN1Q86U42 306 aaKnown RBP eCLIP8.85□□□□□ -0.99
MLH3-211ENST00000556453 SPDYE4A6NLX3 237 aa8.84□□□□□ -0.99
MLH3-211ENST00000556453 SPDYE1Q8NFV5 336 aaPredicted RBP8.81□□□□□ -1
MLH3-211ENST00000556453 PIP4P2Q8N4L2 257 aa8.78□□□□□ -1
MLH3-211ENST00000556453 CLEC11AQ9Y240 323 aa8.77□□□□□ -1.01
MLH3-211ENST00000556453 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
MLH3-211ENST00000556453 PROM2Q8N271 834 aa8.7□□□□□ -1.02
MLH3-211ENST00000556453 PRR29P0C7W0 189 aa8.66□□□□□ -1.02
MLH3-211ENST00000556453 FKBP8Q14318 412 aa8.66□□□□□ -1.02
MLH3-211ENST00000556453 SP7Q8TDD2 431 aaPredicted RBP8.66□□□□□ -1.02
MLH3-211ENST00000556453 PRKAR2AP13861 404 aaKnown RBP8.64□□□□□ -1.03
MLH3-211ENST00000556453 STAG3Q9UJ98 1225 aa8.63□□□□□ -1.03
MLH3-211ENST00000556453 HAX1O00165 279 aa8.62□□□□□ -1.03
MLH3-211ENST00000556453 CHADLQ6NUI6 762 aa8.6□□□□□ -1.03
MLH3-211ENST00000556453 CREBZFQ9NS37 354 aa8.54□□□□□ -1.04
MLH3-211ENST00000556453 FARP1Q9Y4F1 1045 aaPredicted RBP8.5□□□□□ -1.05
MLH3-211ENST00000556453 C19orf67A6NJJ6 358 aa8.48□□□□□ -1.05
MLH3-211ENST00000556453 EVX2Q03828 476 aa8.46□□□□□ -1.06
MLH3-211ENST00000556453 MNX1P50219 401 aaPredicted RBP8.44□□□□□ -1.06
MLH3-211ENST00000556453 NISCHQ9Y2I1 1504 aa8.44□□□□□ -1.06
MLH3-211ENST00000556453 MIER1Q8N108 512 aa8.39□□□□□ -1.07
MLH3-211ENST00000556453 FBXO3Q9UK99 471 aa8.39□□□□□ -1.07
MLH3-211ENST00000556453 CD44P16070 742 aaKnown RBP8.38□□□□□ -1.07
MLH3-211ENST00000556453 NPM1P06748 294 aaKnown RBP eCLIP8.35□□□□□ -1.07
MLH3-211ENST00000556453 CLCN6P51797 869 aa8.35□□□□□ -1.07
MLH3-211ENST00000556453 PLCD3Q8N3E9 789 aa8.35□□□□□ -1.07
MLH3-211ENST00000556453 PLEKHG5O94827 1062 aa8.33□□□□□ -1.08
MLH3-211ENST00000556453 GABBR2O75899 941 aa8.31□□□□□ -1.08
MLH3-211ENST00000556453 VASPP50552 380 aaPredicted RBP8.31□□□□□ -1.08
MLH3-211ENST00000556453 ZRANB1Q9UGI0 708 aa8.3□□□□□ -1.08
MLH3-211ENST00000556453 ZNF579Q8NAF0 562 aaKnown RBP8.27□□□□□ -1.09
MLH3-211ENST00000556453 PAK3O75914 559 aaPredicted RBP8.26□□□□□ -1.09
MLH3-211ENST00000556453 ZBTB47Q9UFB7 747 aaPredicted RBP8.26□□□□□ -1.09
MLH3-211ENST00000556453 RASEFQ8IZ41 740 aa8.25□□□□□ -1.09
MLH3-211ENST00000556453 NUBP1P53384 320 aa8.24□□□□□ -1.09
MLH3-211ENST00000556453 PHF12Q96QT6 1004 aa8.23□□□□□ -1.09
MLH3-211ENST00000556453 TSPYL2Q9H2G4 693 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms