RNA–Protein interactions for RNA: ENST00000553288.5

AL355916.1-201, humanhuman

TSL 3

Gene AL355916.1, Length 470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355916.1-201ENST00000553288 AEBP2Q6ZN18 517 aaPredicted RBP24.2■■□□□ 1.46
AL355916.1-201ENST00000553288 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
AL355916.1-201ENST00000553288 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
AL355916.1-201ENST00000553288 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
AL355916.1-201ENST00000553288 FOXD1Q16676 465 aa19.08■□□□□ 0.64
AL355916.1-201ENST00000553288 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
AL355916.1-201ENST00000553288 PPP6R1Q9UPN7 881 aa18.27■□□□□ 0.52
AL355916.1-201ENST00000553288 ADRA2BP18089 450 aa18.24■□□□□ 0.51
AL355916.1-201ENST00000553288 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
AL355916.1-201ENST00000553288 MSH5O43196 834 aa17.49■□□□□ 0.39
AL355916.1-201ENST00000553288 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
AL355916.1-201ENST00000553288 MAPK8IP2Q13387 824 aaPredicted RBP16.66■□□□□ 0.26
AL355916.1-201ENST00000553288 PPP4R3CPQ6ZMV5 832 aa16.57■□□□□ 0.24
AL355916.1-201ENST00000553288 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
AL355916.1-201ENST00000553288 DMRT2Q9Y5R5 561 aa16.25■□□□□ 0.19
AL355916.1-201ENST00000553288 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
AL355916.1-201ENST00000553288 KCNA4P22459 653 aa16.02■□□□□ 0.16
AL355916.1-201ENST00000553288 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
AL355916.1-201ENST00000553288 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
AL355916.1-201ENST00000553288 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
AL355916.1-201ENST00000553288 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
AL355916.1-201ENST00000553288 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
AL355916.1-201ENST00000553288 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
AL355916.1-201ENST00000553288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.01
AL355916.1-201ENST00000553288 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
AL355916.1-201ENST00000553288 SLC4A2P04920 1241 aa15.06■□□□□ 0
AL355916.1-201ENST00000553288 RNF39Q9H2S5 420 aa15.06■□□□□ 0
AL355916.1-201ENST00000553288 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
AL355916.1-201ENST00000553288 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
AL355916.1-201ENST00000553288 ZBTB22O15209 634 aa14.79□□□□□ -0.04
AL355916.1-201ENST00000553288 C1QBPQ07021 282 aaKnown RBP14.77□□□□□ -0.05
AL355916.1-201ENST00000553288 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
AL355916.1-201ENST00000553288 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
AL355916.1-201ENST00000553288 EHMT2Q96KQ7 1210 aa14.59□□□□□ -0.07
AL355916.1-201ENST00000553288 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
AL355916.1-201ENST00000553288 CAPN15O75808 1086 aa14.51□□□□□ -0.09
AL355916.1-201ENST00000553288 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
AL355916.1-201ENST00000553288 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
AL355916.1-201ENST00000553288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
AL355916.1-201ENST00000553288 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
AL355916.1-201ENST00000553288 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
AL355916.1-201ENST00000553288 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
AL355916.1-201ENST00000553288 ABCB7O75027 752 aa14.31□□□□□ -0.12
AL355916.1-201ENST00000553288 DSG3P32926 999 aa14.28□□□□□ -0.12
AL355916.1-201ENST00000553288 APLP2Q06481 763 aa14.26□□□□□ -0.13
AL355916.1-201ENST00000553288 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
AL355916.1-201ENST00000553288 POLA2Q14181 598 aa14.11□□□□□ -0.15
AL355916.1-201ENST00000553288 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
AL355916.1-201ENST00000553288 MKRN4PQ13434 485 aaPredicted RBP13.71□□□□□ -0.21
AL355916.1-201ENST00000553288 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
AL355916.1-201ENST00000553288 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
AL355916.1-201ENST00000553288 FBLN2P98095 1184 aa13.59□□□□□ -0.23
AL355916.1-201ENST00000553288 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
AL355916.1-201ENST00000553288 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
AL355916.1-201ENST00000553288 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
AL355916.1-201ENST00000553288 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
AL355916.1-201ENST00000553288 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
AL355916.1-201ENST00000553288 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
AL355916.1-201ENST00000553288 REM2Q8IYK8 340 aaPredicted RBP13.28□□□□□ -0.28
AL355916.1-201ENST00000553288 POTEHQ6S545 545 aa13.25□□□□□ -0.29
AL355916.1-201ENST00000553288 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
AL355916.1-201ENST00000553288 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
AL355916.1-201ENST00000553288 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
AL355916.1-201ENST00000553288 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
AL355916.1-201ENST00000553288 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
AL355916.1-201ENST00000553288 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
AL355916.1-201ENST00000553288 FKBP8Q14318 412 aa13.08□□□□□ -0.32
AL355916.1-201ENST00000553288 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
AL355916.1-201ENST00000553288 PIP4P2Q8N4L2 257 aa12.96□□□□□ -0.33
AL355916.1-201ENST00000553288 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
AL355916.1-201ENST00000553288 PROM2Q8N271 834 aa12.88□□□□□ -0.35
AL355916.1-201ENST00000553288 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
AL355916.1-201ENST00000553288 CHADLQ6NUI6 762 aa12.87□□□□□ -0.35
AL355916.1-201ENST00000553288 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
AL355916.1-201ENST00000553288 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
AL355916.1-201ENST00000553288 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
AL355916.1-201ENST00000553288 HAX1O00165 279 aa12.61□□□□□ -0.39
AL355916.1-201ENST00000553288 EVX2Q03828 476 aa12.6□□□□□ -0.39
AL355916.1-201ENST00000553288 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
AL355916.1-201ENST00000553288 MIER1Q8N108 512 aa12.58□□□□□ -0.4
AL355916.1-201ENST00000553288 MNX1P50219 401 aaPredicted RBP12.53□□□□□ -0.4
AL355916.1-201ENST00000553288 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
AL355916.1-201ENST00000553288 NISCHQ9Y2I1 1504 aa12.5□□□□□ -0.41
AL355916.1-201ENST00000553288 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
AL355916.1-201ENST00000553288 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
AL355916.1-201ENST00000553288 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
AL355916.1-201ENST00000553288 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
AL355916.1-201ENST00000553288 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
AL355916.1-201ENST00000553288 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
AL355916.1-201ENST00000553288 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
AL355916.1-201ENST00000553288 ZRANB1Q9UGI0 708 aa12.34□□□□□ -0.43
AL355916.1-201ENST00000553288 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
AL355916.1-201ENST00000553288 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
AL355916.1-201ENST00000553288 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
AL355916.1-201ENST00000553288 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
AL355916.1-201ENST00000553288 PHF12Q96QT6 1004 aa12.28□□□□□ -0.44
AL355916.1-201ENST00000553288 NUBP1P53384 320 aa12.27□□□□□ -0.45
AL355916.1-201ENST00000553288 GABBR2O75899 941 aa12.22□□□□□ -0.45
AL355916.1-201ENST00000553288 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
AL355916.1-201ENST00000553288 ZBTB47Q9UFB7 747 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms