RNA–Protein interactions for RNA: ENST00000553230.1

PAN2-220, Transcript of poly(A) specific ribonuclease subunit PAN2, humanhuman

TSL 2

Gene PAN2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN2-220ENST00000553230 AEBP2Q6ZN18 517 aaPredicted RBP16.55■□□□□ 0.24
PAN2-220ENST00000553230 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
PAN2-220ENST00000553230 PHF23Q9BUL5 403 aaPredicted RBP14.25□□□□□ -0.13
PAN2-220ENST00000553230 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
PAN2-220ENST00000553230 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
PAN2-220ENST00000553230 FOXD1Q16676 465 aa13.06□□□□□ -0.32
PAN2-220ENST00000553230 ADRA2BP18089 450 aa12.57□□□□□ -0.4
PAN2-220ENST00000553230 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
PAN2-220ENST00000553230 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
PAN2-220ENST00000553230 MSH5O43196 834 aa12.12□□□□□ -0.47
PAN2-220ENST00000553230 POTEDQ86YR6 584 aa12.08□□□□□ -0.48
PAN2-220ENST00000553230 PPP4R3CPQ6ZMV5 832 aa11.66□□□□□ -0.54
PAN2-220ENST00000553230 SCAF1Q9H7N4 1312 aaKnown RBP11.63□□□□□ -0.55
PAN2-220ENST00000553230 NCBP3Q53F19 620 aaKnown RBP11.44□□□□□ -0.58
PAN2-220ENST00000553230 KCNA4P22459 653 aa11.38□□□□□ -0.59
PAN2-220ENST00000553230 MAPK8IP2Q13387 824 aaPredicted RBP11.38□□□□□ -0.59
PAN2-220ENST00000553230 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
PAN2-220ENST00000553230 DMRT2Q9Y5R5 561 aa11.28□□□□□ -0.6
PAN2-220ENST00000553230 NPM3O75607 178 aaKnown RBP11.18□□□□□ -0.62
PAN2-220ENST00000553230 RNF216Q9NWF9 866 aaPredicted RBP11.12□□□□□ -0.63
PAN2-220ENST00000553230 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
PAN2-220ENST00000553230 SLC4A1APQ9BWU0 796 aaKnown RBP10.9□□□□□ -0.66
PAN2-220ENST00000553230 DNAJC5BQ9UF47 199 aa10.89□□□□□ -0.67
PAN2-220ENST00000553230 DCAF8L1A6NGE4 600 aa10.8□□□□□ -0.68
PAN2-220ENST00000553230 EHMT2Q96KQ7 1210 aa10.59□□□□□ -0.71
PAN2-220ENST00000553230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.57□□□□□ -0.728e-12■■■■□ 21.5
PAN2-220ENST00000553230 SLC4A2P04920 1241 aa10.52□□□□□ -0.73
PAN2-220ENST00000553230 FOXD4L1Q9NU39 408 aa10.52□□□□□ -0.73
PAN2-220ENST00000553230 ZBTB22O15209 634 aa10.44□□□□□ -0.74
PAN2-220ENST00000553230 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
PAN2-220ENST00000553230 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
PAN2-220ENST00000553230 RNF39Q9H2S5 420 aa10.34□□□□□ -0.75
PAN2-220ENST00000553230 U3KPZ7 1027 aaPredicted RBP10.34□□□□□ -0.75
PAN2-220ENST00000553230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.33□□□□□ -0.76
PAN2-220ENST00000553230 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
PAN2-220ENST00000553230 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.77
PAN2-220ENST00000553230 C1QBPQ07021 282 aaKnown RBP10.26□□□□□ -0.77
PAN2-220ENST00000553230 APLP2Q06481 763 aa10.25□□□□□ -0.77
PAN2-220ENST00000553230 ATXN8OSP0DMR3 200 aa10.19□□□□□ -0.78
PAN2-220ENST00000553230 CACNB1Q02641 598 aaPredicted RBP10.08□□□□□ -0.8
PAN2-220ENST00000553230 CAPN15O75808 1086 aa10.05□□□□□ -0.8
PAN2-220ENST00000553230 SPINK5Q9NQ38 1064 aaPredicted RBP10.03□□□□□ -0.8
PAN2-220ENST00000553230 ZNF219Q9P2Y4 722 aaPredicted RBP10.03□□□□□ -0.8
PAN2-220ENST00000553230 TRHP20396 242 aaPredicted RBP10□□□□□ -0.81
PAN2-220ENST00000553230 ATF5Q9Y2D1 282 aaPredicted RBP10□□□□□ -0.81
PAN2-220ENST00000553230 DSG3P32926 999 aa9.84□□□□□ -0.83
PAN2-220ENST00000553230 POLA2Q14181 598 aa9.84□□□□□ -0.83
PAN2-220ENST00000553230 ABCB7O75027 752 aa9.82□□□□□ -0.84
PAN2-220ENST00000553230 ZBTB12Q9Y330 459 aaPredicted RBP9.75□□□□□ -0.85
PAN2-220ENST00000553230 NISCHQ9Y2I1 1504 aa9.74□□□□□ -0.85
PAN2-220ENST00000553230 FBLN2P98095 1184 aa9.71□□□□□ -0.86
PAN2-220ENST00000553230 MKRN4PQ13434 485 aaPredicted RBP9.59□□□□□ -0.87
PAN2-220ENST00000553230 OSCARQ8IYS5 282 aa9.48□□□□□ -0.89
PAN2-220ENST00000553230 FKBP8Q14318 412 aa9.46□□□□□ -0.9
PAN2-220ENST00000553230 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.9
PAN2-220ENST00000553230 SPDYE2BA6NHP3 402 aa9.45□□□□□ -0.9
PAN2-220ENST00000553230 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
PAN2-220ENST00000553230 SPDYE6P0CI01 402 aa9.45□□□□□ -0.9
PAN2-220ENST00000553230 SPDYE2Q495Y8 402 aa9.45□□□□□ -0.9
PAN2-220ENST00000553230 ZNF692Q9BU19 519 aaPredicted RBP9.41□□□□□ -0.9
PAN2-220ENST00000553230 SSUH2Q9Y2M2 353 aa9.34□□□□□ -0.91
PAN2-220ENST00000553230 AKT1S1Q96B36 256 aa9.31□□□□□ -0.92
PAN2-220ENST00000553230 PABPN1Q86U42 306 aaKnown RBP eCLIP9.26□□□□□ -0.93
PAN2-220ENST00000553230 PROM2Q8N271 834 aa9.26□□□□□ -0.93
PAN2-220ENST00000553230 POTEHQ6S545 545 aa9.25□□□□□ -0.93
PAN2-220ENST00000553230 FBXO3Q9UK99 471 aa9.2□□□□□ -0.94
PAN2-220ENST00000553230 REM2Q8IYK8 340 aaPredicted RBP9.19□□□□□ -0.94
PAN2-220ENST00000553230 STAG3Q9UJ98 1225 aa9.19□□□□□ -0.94
PAN2-220ENST00000553230 SPDYE1Q8NFV5 336 aaPredicted RBP9.18□□□□□ -0.94
PAN2-220ENST00000553230 CLEC11AQ9Y240 323 aa9.1□□□□□ -0.95
PAN2-220ENST00000553230 PITPNM1O00562 1244 aa9.07□□□□□ -0.96
PAN2-220ENST00000553230 PRR29P0C7W0 189 aa9.05□□□□□ -0.96
PAN2-220ENST00000553230 VASPP50552 380 aaPredicted RBP9.01□□□□□ -0.97
PAN2-220ENST00000553230 PLEKHG5O94827 1062 aa9□□□□□ -0.97
PAN2-220ENST00000553230 CHRDL2Q6WN34 429 aa9□□□□□ -0.97
PAN2-220ENST00000553230 MIER1Q8N108 512 aa8.98□□□□□ -0.97
PAN2-220ENST00000553230 PLCD3Q8N3E9 789 aa8.98□□□□□ -0.97
PAN2-220ENST00000553230 ZBTB47Q9UFB7 747 aaPredicted RBP8.93□□□□□ -0.98
PAN2-220ENST00000553230 FXR2P51116 673 aaKnown RBP eCLIP8.91□□□□□ -0.98
PAN2-220ENST00000553230 KLHL34Q8N239 644 aa8.89□□□□□ -0.99
PAN2-220ENST00000553230 CREBZFQ9NS37 354 aa8.88□□□□□ -0.99
PAN2-220ENST00000553230 PRKAR2AP13861 404 aaKnown RBP8.87□□□□□ -0.99
PAN2-220ENST00000553230 PIP4P2Q8N4L2 257 aa8.87□□□□□ -0.99
PAN2-220ENST00000553230 IFNLR1Q8IU57 520 aaPredicted RBP8.85□□□□□ -0.99
PAN2-220ENST00000553230 CHADLQ6NUI6 762 aa8.83□□□□□ -1
PAN2-220ENST00000553230 NPM1P06748 294 aaKnown RBP eCLIP8.82□□□□□ -1
PAN2-220ENST00000553230 SPOCK2Q92563 424 aa8.8□□□□□ -1
PAN2-220ENST00000553230 FARP1Q9Y4F1 1045 aaPredicted RBP8.8□□□□□ -1
PAN2-220ENST00000553230 MNX1P50219 401 aaPredicted RBP8.78□□□□□ -1
PAN2-220ENST00000553230 AMER1Q5JTC6 1135 aaPredicted RBP8.72□□□□□ -1.01
PAN2-220ENST00000553230 DNAJC5Q9H3Z4 198 aa8.7□□□□□ -1.02
PAN2-220ENST00000553230 NUBP1P53384 320 aa8.69□□□□□ -1.02
PAN2-220ENST00000553230 FAM212AQ96EL1 285 aa8.69□□□□□ -1.02
PAN2-220ENST00000553230 ABCC9O60706 1549 aa8.69□□□□□ -1.02
PAN2-220ENST00000553230 CCDC180Q9P1Z9 1646 aa8.69□□□□□ -1.02
PAN2-220ENST00000553230 PAK3O75914 559 aaPredicted RBP8.68□□□□□ -1.02
PAN2-220ENST00000553230 GSE1Q14687 1217 aa8.68□□□□□ -1.02
PAN2-220ENST00000553230 DCAF8Q5TAQ9 597 aa8.66□□□□□ -1.02
PAN2-220ENST00000553230 CIZ1Q9ULV3 898 aaPredicted RBP8.66□□□□□ -1.02
PAN2-220ENST00000553230 RASEFQ8IZ41 740 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms