RNA–Protein interactions for RNA: ENST00000550597.1

ARL1-207, Transcript of ADP ribosylation factor like GTPase 1, humanhuman

TSL 2

Gene ARL1, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL1-207ENST00000550597 AEBP2Q6ZN18 517 aaPredicted RBP29.54■■■□□ 2.32
ARL1-207ENST00000550597 CHIC1Q5VXU3 224 aa28.28■■■□□ 2.12
ARL1-207ENST00000550597 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
ARL1-207ENST00000550597 PHF23Q9BUL5 403 aaPredicted RBP24.9■■□□□ 1.58
ARL1-207ENST00000550597 FOXD1Q16676 465 aa23.44■■□□□ 1.34
ARL1-207ENST00000550597 PLPPR3Q6T4P5 718 aa22.72■■□□□ 1.23
ARL1-207ENST00000550597 PPP6R1Q9UPN7 881 aa22.09■■□□□ 1.13
ARL1-207ENST00000550597 ADRA2BP18089 450 aa22.07■■□□□ 1.12
ARL1-207ENST00000550597 PIAS4Q8N2W9 510 aaPredicted RBP22.01■■□□□ 1.11
ARL1-207ENST00000550597 MSH5O43196 834 aa21.85■■□□□ 1.09
ARL1-207ENST00000550597 POTEDQ86YR6 584 aa20.95■□□□□ 0.94
ARL1-207ENST00000550597 MAPK8IP2Q13387 824 aaPredicted RBP20.2■□□□□ 0.82
ARL1-207ENST00000550597 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
ARL1-207ENST00000550597 DMRT2Q9Y5R5 561 aa19.98■□□□□ 0.79
ARL1-207ENST00000550597 PPP4R3CPQ6ZMV5 832 aa19.95■□□□□ 0.78
ARL1-207ENST00000550597 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
ARL1-207ENST00000550597 HOXD11P31277 338 aaPredicted RBP19.32■□□□□ 0.68
ARL1-207ENST00000550597 DCAF8L1A6NGE4 600 aa19.29■□□□□ 0.68
ARL1-207ENST00000550597 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
ARL1-207ENST00000550597 RNF216Q9NWF9 866 aaPredicted RBP19.25■□□□□ 0.67
ARL1-207ENST00000550597 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
ARL1-207ENST00000550597 KCNA4P22459 653 aa18.82■□□□□ 0.6
ARL1-207ENST00000550597 CACNB1Q02641 598 aaPredicted RBP18.67■□□□□ 0.58
ARL1-207ENST00000550597 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
ARL1-207ENST00000550597 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
ARL1-207ENST00000550597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.51■□□□□ 0.55
ARL1-207ENST00000550597 C1QBPQ07021 282 aaKnown RBP18.4■□□□□ 0.54
ARL1-207ENST00000550597 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
ARL1-207ENST00000550597 SLC4A2P04920 1241 aa18.03■□□□□ 0.48
ARL1-207ENST00000550597 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.44
ARL1-207ENST00000550597 CAPN15O75808 1086 aa17.79■□□□□ 0.44
ARL1-207ENST00000550597 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
ARL1-207ENST00000550597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
ARL1-207ENST00000550597 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
ARL1-207ENST00000550597 APLP2Q06481 763 aa17.63■□□□□ 0.41
ARL1-207ENST00000550597 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
ARL1-207ENST00000550597 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
ARL1-207ENST00000550597 DSG3P32926 999 aa17.56■□□□□ 0.4
ARL1-207ENST00000550597 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
ARL1-207ENST00000550597 FOXD4L1Q9NU39 408 aa17.49■□□□□ 0.39
ARL1-207ENST00000550597 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
ARL1-207ENST00000550597 ABCB7O75027 752 aa17.4■□□□□ 0.38
ARL1-207ENST00000550597 ZBTB22O15209 634 aa17.27■□□□□ 0.36
ARL1-207ENST00000550597 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
ARL1-207ENST00000550597 POLA2Q14181 598 aa17.1■□□□□ 0.33
ARL1-207ENST00000550597 ATXN8OSP0DMR3 200 aa16.88■□□□□ 0.29
ARL1-207ENST00000550597 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
ARL1-207ENST00000550597 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
ARL1-207ENST00000550597 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
ARL1-207ENST00000550597 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
ARL1-207ENST00000550597 OSCARQ8IYS5 282 aa16.55■□□□□ 0.24
ARL1-207ENST00000550597 POTEHQ6S545 545 aa16.48■□□□□ 0.23
ARL1-207ENST00000550597 FBLN2P98095 1184 aa16.47■□□□□ 0.23
ARL1-207ENST00000550597 AKT1S1Q96B36 256 aa16.42■□□□□ 0.22
ARL1-207ENST00000550597 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
ARL1-207ENST00000550597 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
ARL1-207ENST00000550597 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
ARL1-207ENST00000550597 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
ARL1-207ENST00000550597 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
ARL1-207ENST00000550597 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
ARL1-207ENST00000550597 NISCHQ9Y2I1 1504 aa16.21■□□□□ 0.19
ARL1-207ENST00000550597 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
ARL1-207ENST00000550597 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
ARL1-207ENST00000550597 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
ARL1-207ENST00000550597 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
ARL1-207ENST00000550597 PIP4P2Q8N4L2 257 aa15.96■□□□□ 0.15
ARL1-207ENST00000550597 SPDYE1Q8NFV5 336 aaPredicted RBP15.93■□□□□ 0.14
ARL1-207ENST00000550597 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
ARL1-207ENST00000550597 FXR2P51116 673 aaKnown RBP eCLIP15.88■□□□□ 0.13
ARL1-207ENST00000550597 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
ARL1-207ENST00000550597 PRKAR2AP13861 404 aaKnown RBP15.71■□□□□ 0.11
ARL1-207ENST00000550597 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
ARL1-207ENST00000550597 HAX1O00165 279 aa15.67■□□□□ 0.1
ARL1-207ENST00000550597 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
ARL1-207ENST00000550597 SP7Q8TDD2 431 aaPredicted RBP15.55■□□□□ 0.08
ARL1-207ENST00000550597 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
ARL1-207ENST00000550597 EVX2Q03828 476 aa15.44■□□□□ 0.06
ARL1-207ENST00000550597 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
ARL1-207ENST00000550597 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
ARL1-207ENST00000550597 CREBZFQ9NS37 354 aa15.3■□□□□ 0.04
ARL1-207ENST00000550597 PROM2Q8N271 834 aa15.27■□□□□ 0.04
ARL1-207ENST00000550597 CD44P16070 742 aaKnown RBP15.23■□□□□ 0.03
ARL1-207ENST00000550597 FKBP8Q14318 412 aa15.19■□□□□ 0.02
ARL1-207ENST00000550597 GABBR2O75899 941 aa15.11■□□□□ 0.01
ARL1-207ENST00000550597 NPM1P06748 294 aaKnown RBP eCLIP15.07■□□□□ 0
ARL1-207ENST00000550597 ZRANB1Q9UGI0 708 aa15.06■□□□□ 0
ARL1-207ENST00000550597 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
ARL1-207ENST00000550597 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
ARL1-207ENST00000550597 MIER1Q8N108 512 aa15□□□□□ -0.01
ARL1-207ENST00000550597 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
ARL1-207ENST00000550597 ZNF579Q8NAF0 562 aaKnown RBP14.95□□□□□ -0.02
ARL1-207ENST00000550597 PLCD3Q8N3E9 789 aa14.93□□□□□ -0.02
ARL1-207ENST00000550597 CLCN6P51797 869 aa14.91□□□□□ -0.02
ARL1-207ENST00000550597 PHF12Q96QT6 1004 aa14.85□□□□□ -0.03
ARL1-207ENST00000550597 TSPYL2Q9H2G4 693 aaPredicted RBP14.85□□□□□ -0.03
ARL1-207ENST00000550597 DCBLD2Q96PD2 775 aa14.81□□□□□ -0.04
ARL1-207ENST00000550597 GALR2O43603 387 aaPredicted RBP14.8□□□□□ -0.04
ARL1-207ENST00000550597 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
ARL1-207ENST00000550597 POTEIP0CG38 1075 aa14.77□□□□□ -0.05
ARL1-207ENST00000550597 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms