RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
SMARCC2-207ENST00000549757 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
SMARCC2-207ENST00000549757 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
SMARCC2-207ENST00000549757 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
SMARCC2-207ENST00000549757 FOXD1Q16676 465 aa17.36■□□□□ 0.37
SMARCC2-207ENST00000549757 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
SMARCC2-207ENST00000549757 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
SMARCC2-207ENST00000549757 ADRA2BP18089 450 aa16.54■□□□□ 0.24
SMARCC2-207ENST00000549757 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
SMARCC2-207ENST00000549757 MSH5O43196 834 aa16.02■□□□□ 0.16
SMARCC2-207ENST00000549757 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
SMARCC2-207ENST00000549757 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
SMARCC2-207ENST00000549757 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
SMARCC2-207ENST00000549757 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
SMARCC2-207ENST00000549757 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
SMARCC2-207ENST00000549757 CNKSR2Q8WXI2 1034 aa14.76□□□□□ -0.05
SMARCC2-207ENST00000549757 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
SMARCC2-207ENST00000549757 KCNA4P22459 653 aa14.64□□□□□ -0.07
SMARCC2-207ENST00000549757 HOXD11P31277 338 aaPredicted RBP14.53□□□□□ -0.08
SMARCC2-207ENST00000549757 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
SMARCC2-207ENST00000549757 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.09
SMARCC2-207ENST00000549757 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
SMARCC2-207ENST00000549757 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
SMARCC2-207ENST00000549757 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
SMARCC2-207ENST00000549757 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
SMARCC2-207ENST00000549757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.212e-7■■■■□ 25.5
SMARCC2-207ENST00000549757 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
SMARCC2-207ENST00000549757 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
SMARCC2-207ENST00000549757 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
SMARCC2-207ENST00000549757 ZBTB22O15209 634 aa13.5□□□□□ -0.25
SMARCC2-207ENST00000549757 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
SMARCC2-207ENST00000549757 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
SMARCC2-207ENST00000549757 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
SMARCC2-207ENST00000549757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
SMARCC2-207ENST00000549757 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
SMARCC2-207ENST00000549757 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
SMARCC2-207ENST00000549757 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
SMARCC2-207ENST00000549757 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
SMARCC2-207ENST00000549757 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
SMARCC2-207ENST00000549757 APLP2Q06481 763 aa13.17□□□□□ -0.3
SMARCC2-207ENST00000549757 CAPN15O75808 1086 aa13.14□□□□□ -0.31
SMARCC2-207ENST00000549757 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
SMARCC2-207ENST00000549757 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
SMARCC2-207ENST00000549757 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
SMARCC2-207ENST00000549757 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
SMARCC2-207ENST00000549757 DSG3P32926 999 aa13.03□□□□□ -0.32
SMARCC2-207ENST00000549757 ABCB7O75027 752 aa12.91□□□□□ -0.34
SMARCC2-207ENST00000549757 POLA2Q14181 598 aa12.83□□□□□ -0.36
SMARCC2-207ENST00000549757 NISCHQ9Y2I1 1504 aa12.61□□□□□ -0.39
SMARCC2-207ENST00000549757 ZBTB12Q9Y330 459 aaPredicted RBP12.58□□□□□ -0.4
SMARCC2-207ENST00000549757 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.41
SMARCC2-207ENST00000549757 FBLN2P98095 1184 aa12.45□□□□□ -0.42
SMARCC2-207ENST00000549757 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
SMARCC2-207ENST00000549757 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
SMARCC2-207ENST00000549757 SPDYE2BA6NHP3 402 aa12.25□□□□□ -0.45
SMARCC2-207ENST00000549757 SPDYE6P0CI01 402 aa12.25□□□□□ -0.45
SMARCC2-207ENST00000549757 SPDYE2Q495Y8 402 aa12.25□□□□□ -0.45
SMARCC2-207ENST00000549757 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
SMARCC2-207ENST00000549757 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
SMARCC2-207ENST00000549757 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
SMARCC2-207ENST00000549757 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
SMARCC2-207ENST00000549757 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
SMARCC2-207ENST00000549757 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
SMARCC2-207ENST00000549757 PITPNM1O00562 1244 aa11.97□□□□□ -0.49
SMARCC2-207ENST00000549757 PROM2Q8N271 834 aa11.96□□□□□ -0.49
SMARCC2-207ENST00000549757 FKBP8Q14318 412 aa11.95□□□□□ -0.5
SMARCC2-207ENST00000549757 CHRDL2Q6WN34 429 aa11.93□□□□□ -0.5
SMARCC2-207ENST00000549757 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
SMARCC2-207ENST00000549757 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
SMARCC2-207ENST00000549757 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
SMARCC2-207ENST00000549757 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.521e-6■■□□□ 12.1
SMARCC2-207ENST00000549757 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
SMARCC2-207ENST00000549757 POTEHQ6S545 545 aa11.75□□□□□ -0.53
SMARCC2-207ENST00000549757 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
SMARCC2-207ENST00000549757 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
SMARCC2-207ENST00000549757 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
SMARCC2-207ENST00000549757 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
SMARCC2-207ENST00000549757 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
SMARCC2-207ENST00000549757 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
SMARCC2-207ENST00000549757 ABCC9O60706 1549 aa11.51□□□□□ -0.57
SMARCC2-207ENST00000549757 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
SMARCC2-207ENST00000549757 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
SMARCC2-207ENST00000549757 MIER1Q8N108 512 aa11.45□□□□□ -0.58
SMARCC2-207ENST00000549757 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
SMARCC2-207ENST00000549757 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
SMARCC2-207ENST00000549757 C19orf67A6NJJ6 358 aa11.39□□□□□ -0.59
SMARCC2-207ENST00000549757 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
SMARCC2-207ENST00000549757 HAX1O00165 279 aa11.37□□□□□ -0.59
SMARCC2-207ENST00000549757 PLEKHG5O94827 1062 aa11.36□□□□□ -0.59
SMARCC2-207ENST00000549757 EVX2Q03828 476 aa11.36□□□□□ -0.59
SMARCC2-207ENST00000549757 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMARCC2-207ENST00000549757 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-207ENST00000549757 CD44P16070 742 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-207ENST00000549757 IFNLR1Q8IU57 520 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-207ENST00000549757 NUBP1P53384 320 aa11.25□□□□□ -0.61
SMARCC2-207ENST00000549757 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
SMARCC2-207ENST00000549757 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
SMARCC2-207ENST00000549757 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
SMARCC2-207ENST00000549757 ZRANB1Q9UGI0 708 aa11.2□□□□□ -0.62
SMARCC2-207ENST00000549757 ZNF579Q8NAF0 562 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms