RNA–Protein interactions for RNA: ENST00000548153.5

TMEM106C-207, Transcript of transmembrane protein 106C, humanhuman

TSL 4

Gene TMEM106C, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-207ENST00000548153 AEBP2Q6ZN18 517 aaPredicted RBP20.22■□□□□ 0.83
TMEM106C-207ENST00000548153 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
TMEM106C-207ENST00000548153 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
TMEM106C-207ENST00000548153 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
TMEM106C-207ENST00000548153 FOXD1Q16676 465 aa15.98■□□□□ 0.15
TMEM106C-207ENST00000548153 PLPPR3Q6T4P5 718 aa15.49■□□□□ 0.07
TMEM106C-207ENST00000548153 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
TMEM106C-207ENST00000548153 ADRA2BP18089 450 aa15.04■□□□□ -0
TMEM106C-207ENST00000548153 PIAS4Q8N2W9 510 aaPredicted RBP14.92□□□□□ -0.02
TMEM106C-207ENST00000548153 MSH5O43196 834 aa14.81□□□□□ -0.04
TMEM106C-207ENST00000548153 POTEDQ86YR6 584 aa14.49□□□□□ -0.09
TMEM106C-207ENST00000548153 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
TMEM106C-207ENST00000548153 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
TMEM106C-207ENST00000548153 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
TMEM106C-207ENST00000548153 NISCHQ9Y2I1 1504 aa13.64□□□□□ -0.23
TMEM106C-207ENST00000548153 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
TMEM106C-207ENST00000548153 CNKSR2Q8WXI2 1034 aa13.31□□□□□ -0.28
TMEM106C-207ENST00000548153 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
TMEM106C-207ENST00000548153 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
TMEM106C-207ENST00000548153 NCBP3Q53F19 620 aaKnown RBP13.08□□□□□ -0.32
TMEM106C-207ENST00000548153 KCNA4P22459 653 aa13.01□□□□□ -0.33
TMEM106C-207ENST00000548153 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
TMEM106C-207ENST00000548153 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
TMEM106C-207ENST00000548153 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
TMEM106C-207ENST00000548153 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
TMEM106C-207ENST00000548153 CACNB1Q02641 598 aaPredicted RBP12.69□□□□□ -0.38
TMEM106C-207ENST00000548153 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
TMEM106C-207ENST00000548153 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
TMEM106C-207ENST00000548153 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
TMEM106C-207ENST00000548153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
TMEM106C-207ENST00000548153 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
TMEM106C-207ENST00000548153 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
TMEM106C-207ENST00000548153 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
TMEM106C-207ENST00000548153 SPINK5Q9NQ38 1064 aaPredicted RBP12.11□□□□□ -0.47
TMEM106C-207ENST00000548153 CAPN15O75808 1086 aa11.99□□□□□ -0.49
TMEM106C-207ENST00000548153 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
TMEM106C-207ENST00000548153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.97□□□□□ -0.49
TMEM106C-207ENST00000548153 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
TMEM106C-207ENST00000548153 DSG3P32926 999 aa11.97□□□□□ -0.49
TMEM106C-207ENST00000548153 HNRNPUL2Q1KMD3 747 aaKnown RBP11.97□□□□□ -0.49
TMEM106C-207ENST00000548153 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
TMEM106C-207ENST00000548153 ZBTB22O15209 634 aa11.95□□□□□ -0.5
TMEM106C-207ENST00000548153 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
TMEM106C-207ENST00000548153 APLP2Q06481 763 aa11.9□□□□□ -0.5
TMEM106C-207ENST00000548153 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
TMEM106C-207ENST00000548153 ZNF219Q9P2Y4 722 aaPredicted RBP11.85□□□□□ -0.51
TMEM106C-207ENST00000548153 ABCB7O75027 752 aa11.77□□□□□ -0.53
TMEM106C-207ENST00000548153 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
TMEM106C-207ENST00000548153 POLA2Q14181 598 aa11.61□□□□□ -0.55
TMEM106C-207ENST00000548153 ATXN8OSP0DMR3 200 aa11.58□□□□□ -0.56
TMEM106C-207ENST00000548153 ZCCHC6Q5VYS8 1495 aaKnown RBP11.47□□□□□ -0.57
TMEM106C-207ENST00000548153 DCAF1Q9Y4B6 1507 aa11.42□□□□□ -0.58
TMEM106C-207ENST00000548153 ZBTB12Q9Y330 459 aaPredicted RBP11.36□□□□□ -0.59
TMEM106C-207ENST00000548153 POTEHQ6S545 545 aa11.35□□□□□ -0.59
TMEM106C-207ENST00000548153 MYO15BQ96JP2 1530 aa11.34□□□□□ -0.59
TMEM106C-207ENST00000548153 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
TMEM106C-207ENST00000548153 OSCARQ8IYS5 282 aa11.26□□□□□ -0.61
TMEM106C-207ENST00000548153 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
TMEM106C-207ENST00000548153 NACADO15069 1562 aa11.17□□□□□ -0.62
TMEM106C-207ENST00000548153 FBLN2P98095 1184 aa11.15□□□□□ -0.62
TMEM106C-207ENST00000548153 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
TMEM106C-207ENST00000548153 ABCC9O60706 1549 aa11.11□□□□□ -0.63
TMEM106C-207ENST00000548153 DCAF8L2P0C7V8 631 aa11.09□□□□□ -0.63
TMEM106C-207ENST00000548153 FKBP8Q14318 412 aa11.09□□□□□ -0.63
TMEM106C-207ENST00000548153 SPDYE2BA6NHP3 402 aa11.06□□□□□ -0.64
TMEM106C-207ENST00000548153 SPDYE6P0CI01 402 aa11.06□□□□□ -0.64
TMEM106C-207ENST00000548153 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
TMEM106C-207ENST00000548153 REM2Q8IYK8 340 aaPredicted RBP11.06□□□□□ -0.64
TMEM106C-207ENST00000548153 CHRDL2Q6WN34 429 aa11.05□□□□□ -0.64
TMEM106C-207ENST00000548153 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
TMEM106C-207ENST00000548153 SSUH2Q9Y2M2 353 aa11□□□□□ -0.65
TMEM106C-207ENST00000548153 PITPNM1O00562 1244 aa10.96□□□□□ -0.65
TMEM106C-207ENST00000548153 AMER1Q5JTC6 1135 aaPredicted RBP10.93□□□□□ -0.66
TMEM106C-207ENST00000548153 ZNF692Q9BU19 519 aaPredicted RBP10.92□□□□□ -0.66
TMEM106C-207ENST00000548153 SHROOM4Q9ULL8 1493 aa10.88□□□□□ -0.67
TMEM106C-207ENST00000548153 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
TMEM106C-207ENST00000548153 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
TMEM106C-207ENST00000548153 SCRIBQ14160 1630 aa10.81□□□□□ -0.68
TMEM106C-207ENST00000548153 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
TMEM106C-207ENST00000548153 SPDYE1Q8NFV5 336 aaPredicted RBP10.8□□□□□ -0.68
TMEM106C-207ENST00000548153 RTN4Q9NQC3 1192 aaKnown RBP10.79□□□□□ -0.68
TMEM106C-207ENST00000548153 CLEC11AQ9Y240 323 aa10.73□□□□□ -0.69
TMEM106C-207ENST00000548153 SPDYE4A6NLX3 237 aa10.72□□□□□ -0.69
TMEM106C-207ENST00000548153 FBXO3Q9UK99 471 aa10.7□□□□□ -0.7
TMEM106C-207ENST00000548153 PRKAR2AP13861 404 aaKnown RBP10.63□□□□□ -0.71
TMEM106C-207ENST00000548153 UNC13AQ9UPW8 1703 aa10.63□□□□□ -0.71
TMEM106C-207ENST00000548153 SP7Q8TDD2 431 aaPredicted RBP10.62□□□□□ -0.71
TMEM106C-207ENST00000548153 PROM2Q8N271 834 aa10.61□□□□□ -0.71
TMEM106C-207ENST00000548153 PRR29P0C7W0 189 aa10.59□□□□□ -0.71
TMEM106C-207ENST00000548153 BAZ1AQ9NRL2 1556 aaPredicted RBP10.59□□□□□ -0.71
TMEM106C-207ENST00000548153 BICRAQ9NZM4 1560 aa10.57□□□□□ -0.72
TMEM106C-207ENST00000548153 CHADLQ6NUI6 762 aa10.57□□□□□ -0.72
TMEM106C-207ENST00000548153 HAX1O00165 279 aa10.55□□□□□ -0.72
TMEM106C-207ENST00000548153 SUPT5HO00267 1087 aaKnown RBP10.54□□□□□ -0.72
TMEM106C-207ENST00000548153 RSF1Q96T23 1441 aaPredicted RBP10.54□□□□□ -0.72
TMEM106C-207ENST00000548153 EVX2Q03828 476 aa10.53□□□□□ -0.72
TMEM106C-207ENST00000548153 SLC24A1O60721 1099 aa10.51□□□□□ -0.73
TMEM106C-207ENST00000548153 STAG3Q9UJ98 1225 aa10.5□□□□□ -0.73
TMEM106C-207ENST00000548153 C19orf67A6NJJ6 358 aa10.48□□□□□ -0.73
TMEM106C-207ENST00000548153 CREBZFQ9NS37 354 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms