RNA–Protein interactions for RNA: ENST00000547539.1

FAM216A-204, Transcript of family with sequence similarity 216 member A, humanhuman

TSL 2

Gene FAM216A, Length 1,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM216A-204ENST00000547539 AEBP2Q6ZN18 517 aaPredicted RBP27.02■■□□□ 1.92
FAM216A-204ENST00000547539 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
FAM216A-204ENST00000547539 PHF23Q9BUL5 403 aaPredicted RBP22.95■■□□□ 1.26
FAM216A-204ENST00000547539 SENP3Q9H4L4 574 aaPredicted RBP22.82■■□□□ 1.24
FAM216A-204ENST00000547539 FOXD1Q16676 465 aa21.33■■□□□ 1
FAM216A-204ENST00000547539 PLPPR3Q6T4P5 718 aa20.98■□□□□ 0.95
FAM216A-204ENST00000547539 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
FAM216A-204ENST00000547539 ADRA2BP18089 450 aa20.34■□□□□ 0.85
FAM216A-204ENST00000547539 PIAS4Q8N2W9 510 aaPredicted RBP20.04■□□□□ 0.8
FAM216A-204ENST00000547539 MSH5O43196 834 aa19.63■□□□□ 0.73
FAM216A-204ENST00000547539 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
FAM216A-204ENST00000547539 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
FAM216A-204ENST00000547539 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
FAM216A-204ENST00000547539 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
FAM216A-204ENST00000547539 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
FAM216A-204ENST00000547539 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
FAM216A-204ENST00000547539 KCNA4P22459 653 aa17.87■□□□□ 0.45
FAM216A-204ENST00000547539 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
FAM216A-204ENST00000547539 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
FAM216A-204ENST00000547539 HOXD11P31277 338 aaPredicted RBP17.7■□□□□ 0.42
FAM216A-204ENST00000547539 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
FAM216A-204ENST00000547539 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
FAM216A-204ENST00000547539 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.31
FAM216A-204ENST00000547539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
FAM216A-204ENST00000547539 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
FAM216A-204ENST00000547539 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
FAM216A-204ENST00000547539 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
FAM216A-204ENST00000547539 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
FAM216A-204ENST00000547539 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.26
FAM216A-204ENST00000547539 C1QBPQ07021 282 aaKnown RBP16.57■□□□□ 0.24
FAM216A-204ENST00000547539 ZBTB22O15209 634 aa16.47■□□□□ 0.23
FAM216A-204ENST00000547539 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
FAM216A-204ENST00000547539 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
FAM216A-204ENST00000547539 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
FAM216A-204ENST00000547539 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
FAM216A-204ENST00000547539 CAPN15O75808 1086 aa16.23■□□□□ 0.19
FAM216A-204ENST00000547539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
FAM216A-204ENST00000547539 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
FAM216A-204ENST00000547539 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
FAM216A-204ENST00000547539 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
FAM216A-204ENST00000547539 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
FAM216A-204ENST00000547539 APLP2Q06481 763 aa16.05■□□□□ 0.16
FAM216A-204ENST00000547539 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
FAM216A-204ENST00000547539 DSG3P32926 999 aa15.98■□□□□ 0.15
FAM216A-204ENST00000547539 ABCB7O75027 752 aa15.97■□□□□ 0.15
FAM216A-204ENST00000547539 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
FAM216A-204ENST00000547539 ATXN8OSP0DMR3 200 aa15.76■□□□□ 0.11
FAM216A-204ENST00000547539 POLA2Q14181 598 aa15.75■□□□□ 0.11
FAM216A-204ENST00000547539 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
FAM216A-204ENST00000547539 MKRN4PQ13434 485 aaPredicted RBP15.29■□□□□ 0.04
FAM216A-204ENST00000547539 OSCARQ8IYS5 282 aa15.27■□□□□ 0.04
FAM216A-204ENST00000547539 FBLN2P98095 1184 aa15.23■□□□□ 0.03
FAM216A-204ENST00000547539 RBM42Q9BTD8 480 aaKnown RBP15.13■□□□□ 0.01
FAM216A-204ENST00000547539 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
FAM216A-204ENST00000547539 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
FAM216A-204ENST00000547539 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
FAM216A-204ENST00000547539 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
FAM216A-204ENST00000547539 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
FAM216A-204ENST00000547539 REM2Q8IYK8 340 aaPredicted RBP14.85□□□□□ -0.03
FAM216A-204ENST00000547539 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
FAM216A-204ENST00000547539 SPDYE4A6NLX3 237 aa14.77□□□□□ -0.04
FAM216A-204ENST00000547539 POTEHQ6S545 545 aa14.75□□□□□ -0.05
FAM216A-204ENST00000547539 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
FAM216A-204ENST00000547539 PITPNM1O00562 1244 aa14.71□□□□□ -0.06
FAM216A-204ENST00000547539 CHRDL2Q6WN34 429 aa14.7□□□□□ -0.06
FAM216A-204ENST00000547539 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
FAM216A-204ENST00000547539 FKBP8Q14318 412 aa14.6□□□□□ -0.07
FAM216A-204ENST00000547539 SPDYE1Q8NFV5 336 aaPredicted RBP14.58□□□□□ -0.08
FAM216A-204ENST00000547539 PIP4P2Q8N4L2 257 aa14.47□□□□□ -0.09
FAM216A-204ENST00000547539 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
FAM216A-204ENST00000547539 PROM2Q8N271 834 aa14.42□□□□□ -0.1
FAM216A-204ENST00000547539 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
FAM216A-204ENST00000547539 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
FAM216A-204ENST00000547539 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
FAM216A-204ENST00000547539 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
FAM216A-204ENST00000547539 CREBZFQ9NS37 354 aa14.19□□□□□ -0.14
FAM216A-204ENST00000547539 HAX1O00165 279 aa14.09□□□□□ -0.15
FAM216A-204ENST00000547539 FARP1Q9Y4F1 1045 aaPredicted RBP14.09□□□□□ -0.15
FAM216A-204ENST00000547539 MIER1Q8N108 512 aa14.05□□□□□ -0.16
FAM216A-204ENST00000547539 EVX2Q03828 476 aa14.04□□□□□ -0.16
FAM216A-204ENST00000547539 NISCHQ9Y2I1 1504 aa14.01□□□□□ -0.17
FAM216A-204ENST00000547539 MNX1P50219 401 aaPredicted RBP13.99□□□□□ -0.17
FAM216A-204ENST00000547539 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
FAM216A-204ENST00000547539 FBXO3Q9UK99 471 aa13.99□□□□□ -0.17
FAM216A-204ENST00000547539 C19orf67A6NJJ6 358 aa13.95□□□□□ -0.18
FAM216A-204ENST00000547539 VASPP50552 380 aaPredicted RBP13.92□□□□□ -0.18
FAM216A-204ENST00000547539 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
FAM216A-204ENST00000547539 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
FAM216A-204ENST00000547539 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
FAM216A-204ENST00000547539 SP7Q8TDD2 431 aaPredicted RBP13.83□□□□□ -0.19
FAM216A-204ENST00000547539 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
FAM216A-204ENST00000547539 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
FAM216A-204ENST00000547539 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
FAM216A-204ENST00000547539 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
FAM216A-204ENST00000547539 IFNLR1Q8IU57 520 aaPredicted RBP13.74□□□□□ -0.21
FAM216A-204ENST00000547539 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
FAM216A-204ENST00000547539 NUBP1P53384 320 aa13.71□□□□□ -0.22
FAM216A-204ENST00000547539 PHF12Q96QT6 1004 aa13.71□□□□□ -0.22
FAM216A-204ENST00000547539 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
FAM216A-204ENST00000547539 GABBR2O75899 941 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms