RNA–Protein interactions for RNA: ENST00000546149.1

ZCCHC8-209, Transcript of zinc finger CCHC-type containing 8, humanhuman

TSL 3

Gene ZCCHC8, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC8-209ENST00000546149 AEBP2Q6ZN18 517 aaPredicted RBP34.29■■■■□ 3.08
ZCCHC8-209ENST00000546149 CHIC1Q5VXU3 224 aa32.1■■■□□ 2.73
ZCCHC8-209ENST00000546149 SENP3Q9H4L4 574 aaPredicted RBP29.43■■■□□ 2.3
ZCCHC8-209ENST00000546149 PHF23Q9BUL5 403 aaPredicted RBP28.92■■■□□ 2.22
ZCCHC8-209ENST00000546149 FOXD1Q16676 465 aa27.48■■□□□ 1.99
ZCCHC8-209ENST00000546149 POTEDQ86YR6 584 aa26.59■■□□□ 1.85
ZCCHC8-209ENST00000546149 MSH5O43196 834 aa26.04■■□□□ 1.76
ZCCHC8-209ENST00000546149 PIAS4Q8N2W9 510 aaPredicted RBP25.5■■□□□ 1.67
ZCCHC8-209ENST00000546149 PLPPR3Q6T4P5 718 aa25.2■■□□□ 1.62
ZCCHC8-209ENST00000546149 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
ZCCHC8-209ENST00000546149 ADRA2BP18089 450 aa25■■□□□ 1.59
ZCCHC8-209ENST00000546149 DMRT2Q9Y5R5 561 aa23.21■■□□□ 1.31
ZCCHC8-209ENST00000546149 MAPK8IP2Q13387 824 aaPredicted RBP23.17■■□□□ 1.3
ZCCHC8-209ENST00000546149 SCAF1Q9H7N4 1312 aaKnown RBP22.96■■□□□ 1.27
ZCCHC8-209ENST00000546149 CACNB1Q02641 598 aaPredicted RBP22.76■■□□□ 1.23
ZCCHC8-209ENST00000546149 DCAF8L1A6NGE4 600 aa22.26■■□□□ 1.15
ZCCHC8-209ENST00000546149 RNF39Q9H2S5 420 aa22.13■■□□□ 1.13
ZCCHC8-209ENST00000546149 HOXD11P31277 338 aaPredicted RBP22.09■■□□□ 1.13
ZCCHC8-209ENST00000546149 PPP4R3CPQ6ZMV5 832 aa21.97■■□□□ 1.11
ZCCHC8-209ENST00000546149 C1QBPQ07021 282 aaKnown RBP21.8■■□□□ 1.08
ZCCHC8-209ENST00000546149 CNKSR2Q8WXI2 1034 aa21.75■■□□□ 1.07
ZCCHC8-209ENST00000546149 RNF216Q9NWF9 866 aaPredicted RBP21.74■■□□□ 1.07
ZCCHC8-209ENST00000546149 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
ZCCHC8-209ENST00000546149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.962e-6■■■■□ 19.8
ZCCHC8-209ENST00000546149 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
ZCCHC8-209ENST00000546149 POTEHQ6S545 545 aa20.7■□□□□ 0.9
ZCCHC8-209ENST00000546149 NPM3O75607 178 aaKnown RBP20.59■□□□□ 0.89
ZCCHC8-209ENST00000546149 U3KPZ7 1027 aaPredicted RBP20.49■□□□□ 0.87
ZCCHC8-209ENST00000546149 DSG3P32926 999 aa20.48■□□□□ 0.87
ZCCHC8-209ENST00000546149 CAPN15O75808 1086 aa20.41■□□□□ 0.86
ZCCHC8-209ENST00000546149 SPINK5Q9NQ38 1064 aaPredicted RBP20.39■□□□□ 0.85
ZCCHC8-209ENST00000546149 APLP2Q06481 763 aa19.92■□□□□ 0.78
ZCCHC8-209ENST00000546149 TRHP20396 242 aaPredicted RBP19.9■□□□□ 0.78
ZCCHC8-209ENST00000546149 ZNF219Q9P2Y4 722 aaPredicted RBP19.88■□□□□ 0.77
ZCCHC8-209ENST00000546149 SLC4A2P04920 1241 aa19.85■□□□□ 0.77
ZCCHC8-209ENST00000546149 ABCB7O75027 752 aa19.84■□□□□ 0.77
ZCCHC8-209ENST00000546149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
ZCCHC8-209ENST00000546149 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
ZCCHC8-209ENST00000546149 KCNA4P22459 653 aa19.63■□□□□ 0.73
ZCCHC8-209ENST00000546149 RBM42Q9BTD8 480 aaKnown RBP19.6■□□□□ 0.73
ZCCHC8-209ENST00000546149 SAMD1Q6SPF0 538 aaPredicted RBP19.56■□□□□ 0.72
ZCCHC8-209ENST00000546149 CHRDL2Q6WN34 429 aa19.41■□□□□ 0.7
ZCCHC8-209ENST00000546149 POLA2Q14181 598 aa19.22■□□□□ 0.67
ZCCHC8-209ENST00000546149 MYCNP04198 464 aaPredicted RBP19.09■□□□□ 0.65
ZCCHC8-209ENST00000546149 SP7Q8TDD2 431 aaPredicted RBP19.07■□□□□ 0.64
ZCCHC8-209ENST00000546149 AKT1S1Q96B36 256 aa18.99■□□□□ 0.63
ZCCHC8-209ENST00000546149 ZBTB12Q9Y330 459 aaPredicted RBP18.82■□□□□ 0.6
ZCCHC8-209ENST00000546149 PIP4P2Q8N4L2 257 aa18.79■□□□□ 0.6
ZCCHC8-209ENST00000546149 REM2Q8IYK8 340 aaPredicted RBP18.78■□□□□ 0.6
ZCCHC8-209ENST00000546149 HAX1O00165 279 aa18.65■□□□□ 0.58
ZCCHC8-209ENST00000546149 ATF5Q9Y2D1 282 aaPredicted RBP18.65■□□□□ 0.58
ZCCHC8-209ENST00000546149 OSCARQ8IYS5 282 aa18.6■□□□□ 0.57
ZCCHC8-209ENST00000546149 FXR2P51116 673 aaKnown RBP eCLIP18.59■□□□□ 0.57
ZCCHC8-209ENST00000546149 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
ZCCHC8-209ENST00000546149 PITPNM1O00562 1244 aa18.57■□□□□ 0.56
ZCCHC8-209ENST00000546149 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
ZCCHC8-209ENST00000546149 EVX2Q03828 476 aa18.33■□□□□ 0.52
ZCCHC8-209ENST00000546149 SPDYE2BA6NHP3 402 aa18.17■□□□□ 0.5
ZCCHC8-209ENST00000546149 SPDYE6P0CI01 402 aa18.17■□□□□ 0.5
ZCCHC8-209ENST00000546149 SPDYE2Q495Y8 402 aa18.17■□□□□ 0.5
ZCCHC8-209ENST00000546149 PRKAR2AP13861 404 aaKnown RBP18.09■□□□□ 0.49
ZCCHC8-209ENST00000546149 ATXN8OSP0DMR3 200 aa18.05■□□□□ 0.48
ZCCHC8-209ENST00000546149 FBLN2P98095 1184 aa18.04■□□□□ 0.48
ZCCHC8-209ENST00000546149 ZBTB22O15209 634 aa18.03■□□□□ 0.48
ZCCHC8-209ENST00000546149 SPDYE1Q8NFV5 336 aaPredicted RBP18.03■□□□□ 0.48
ZCCHC8-209ENST00000546149 C19orf67A6NJJ6 358 aa18.02■□□□□ 0.48
ZCCHC8-209ENST00000546149 CLEC11AQ9Y240 323 aa18■□□□□ 0.47
ZCCHC8-209ENST00000546149 GABBR2O75899 941 aa17.92■□□□□ 0.46
ZCCHC8-209ENST00000546149 LHX8Q68G74 356 aa17.89■□□□□ 0.45
ZCCHC8-209ENST00000546149 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
ZCCHC8-209ENST00000546149 SSUH2Q9Y2M2 353 aa17.82■□□□□ 0.44
ZCCHC8-209ENST00000546149 MKRN4PQ13434 485 aaPredicted RBP17.77■□□□□ 0.44
ZCCHC8-209ENST00000546149 CHADLQ6NUI6 762 aa17.71■□□□□ 0.43
ZCCHC8-209ENST00000546149 PRR29P0C7W0 189 aa17.62■□□□□ 0.41
ZCCHC8-209ENST00000546149 POTEIP0CG38 1075 aa17.51■□□□□ 0.39
ZCCHC8-209ENST00000546149 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
ZCCHC8-209ENST00000546149 NISCHQ9Y2I1 1504 aa17.49■□□□□ 0.39
ZCCHC8-209ENST00000546149 CLCN6P51797 869 aa17.48■□□□□ 0.39
ZCCHC8-209ENST00000546149 CD44P16070 742 aaKnown RBP17.47■□□□□ 0.39
ZCCHC8-209ENST00000546149 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
ZCCHC8-209ENST00000546149 FARP1Q9Y4F1 1045 aaPredicted RBP17.41■□□□□ 0.38
ZCCHC8-209ENST00000546149 EHMT2Q96KQ7 1210 aa17.39■□□□□ 0.37
ZCCHC8-209ENST00000546149 DCBLD2Q96PD2 775 aa17.3■□□□□ 0.36
ZCCHC8-209ENST00000546149 PLSCR2Q9NRY7 297 aa17.3■□□□□ 0.36
ZCCHC8-209ENST00000546149 ZNF579Q8NAF0 562 aaKnown RBP17.19■□□□□ 0.34
ZCCHC8-209ENST00000546149 ZRANB1Q9UGI0 708 aa17.12■□□□□ 0.33
ZCCHC8-209ENST00000546149 OTUD5Q96G74 571 aa17.01■□□□□ 0.31
ZCCHC8-209ENST00000546149 CREBZFQ9NS37 354 aa17■□□□□ 0.31
ZCCHC8-209ENST00000546149 GALR2O43603 387 aaPredicted RBP16.99■□□□□ 0.31
ZCCHC8-209ENST00000546149 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
ZCCHC8-209ENST00000546149 POTEB2H3BUK9 544 aa16.91■□□□□ 0.3
ZCCHC8-209ENST00000546149 POTEMA6NI47 508 aa16.86■□□□□ 0.29
ZCCHC8-209ENST00000546149 PAK3O75914 559 aaPredicted RBP16.86■□□□□ 0.29
ZCCHC8-209ENST00000546149 POTEGQ6S5H5 508 aa16.79■□□□□ 0.28
ZCCHC8-209ENST00000546149 PHF12Q96QT6 1004 aa16.79■□□□□ 0.28
ZCCHC8-209ENST00000546149 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
ZCCHC8-209ENST00000546149 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
ZCCHC8-209ENST00000546149 PCDH10Q9P2E7 1040 aa16.71■□□□□ 0.27
ZCCHC8-209ENST00000546149 ASTLQ6HA08 431 aaPredicted RBP16.63■□□□□ 0.25
ZCCHC8-209ENST00000546149 METRNQ9UJH8 293 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms