RNA–Protein interactions for RNA: ENST00000544400.1

DDX47-210, Transcript of DEAD-box helicase 47, humanhuman

TSL 3

Gene DDX47, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-210ENST00000544400 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
DDX47-210ENST00000544400 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
DDX47-210ENST00000544400 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
DDX47-210ENST00000544400 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
DDX47-210ENST00000544400 FOXD1Q16676 465 aa16.84■□□□□ 0.29
DDX47-210ENST00000544400 MSH5O43196 834 aa15.91■□□□□ 0.14
DDX47-210ENST00000544400 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
DDX47-210ENST00000544400 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
DDX47-210ENST00000544400 PIAS4Q8N2W9 510 aaPredicted RBP15.76■□□□□ 0.11
DDX47-210ENST00000544400 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.08
DDX47-210ENST00000544400 ADRA2BP18089 450 aa15.56■□□□□ 0.08
DDX47-210ENST00000544400 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
DDX47-210ENST00000544400 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
DDX47-210ENST00000544400 DMRT2Q9Y5R5 561 aa14.29□□□□□ -0.12
DDX47-210ENST00000544400 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
DDX47-210ENST00000544400 DCAF8L1A6NGE4 600 aa13.86□□□□□ -0.19
DDX47-210ENST00000544400 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
DDX47-210ENST00000544400 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
DDX47-210ENST00000544400 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
DDX47-210ENST00000544400 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
DDX47-210ENST00000544400 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
DDX47-210ENST00000544400 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
DDX47-210ENST00000544400 C1QBPQ07021 282 aaKnown RBP13.35□□□□□ -0.27
DDX47-210ENST00000544400 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
DDX47-210ENST00000544400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.15□□□□□ -0.34e-7■■□□□ 11.6
DDX47-210ENST00000544400 NPM3O75607 178 aaKnown RBP13.05□□□□□ -0.32
DDX47-210ENST00000544400 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
DDX47-210ENST00000544400 CAPN15O75808 1086 aa12.71□□□□□ -0.37
DDX47-210ENST00000544400 KCNA4P22459 653 aa12.64□□□□□ -0.39
DDX47-210ENST00000544400 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
DDX47-210ENST00000544400 DSG3P32926 999 aa12.59□□□□□ -0.39
DDX47-210ENST00000544400 APLP2Q06481 763 aa12.53□□□□□ -0.4
DDX47-210ENST00000544400 SLC4A2P04920 1241 aa12.48□□□□□ -0.41
DDX47-210ENST00000544400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
DDX47-210ENST00000544400 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
DDX47-210ENST00000544400 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
DDX47-210ENST00000544400 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
DDX47-210ENST00000544400 POTEHQ6S545 545 aa12.37□□□□□ -0.43
DDX47-210ENST00000544400 ABCB7O75027 752 aa12.35□□□□□ -0.43
DDX47-210ENST00000544400 NISCHQ9Y2I1 1504 aa12.35□□□□□ -0.43
DDX47-210ENST00000544400 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
DDX47-210ENST00000544400 MYCNP04198 464 aaPredicted RBP12.13□□□□□ -0.47
DDX47-210ENST00000544400 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
DDX47-210ENST00000544400 POLA2Q14181 598 aa12.06□□□□□ -0.48
DDX47-210ENST00000544400 SLC4A1APQ9BWU0 796 aaKnown RBP11.96□□□□□ -0.49
DDX47-210ENST00000544400 FOXD4L1Q9NU39 408 aa11.9□□□□□ -0.5
DDX47-210ENST00000544400 CHRDL2Q6WN34 429 aa11.86□□□□□ -0.51
DDX47-210ENST00000544400 ZBTB12Q9Y330 459 aaPredicted RBP11.84□□□□□ -0.51
DDX47-210ENST00000544400 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
DDX47-210ENST00000544400 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
DDX47-210ENST00000544400 OSCARQ8IYS5 282 aa11.64□□□□□ -0.55
DDX47-210ENST00000544400 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
DDX47-210ENST00000544400 ATXN8OSP0DMR3 200 aa11.56□□□□□ -0.56
DDX47-210ENST00000544400 ZBTB22O15209 634 aa11.54□□□□□ -0.56
DDX47-210ENST00000544400 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
DDX47-210ENST00000544400 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
DDX47-210ENST00000544400 FBLN2P98095 1184 aa11.49□□□□□ -0.57
DDX47-210ENST00000544400 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
DDX47-210ENST00000544400 HAX1O00165 279 aa11.45□□□□□ -0.58
DDX47-210ENST00000544400 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
DDX47-210ENST00000544400 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
DDX47-210ENST00000544400 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
DDX47-210ENST00000544400 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
DDX47-210ENST00000544400 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
DDX47-210ENST00000544400 ZNF692Q9BU19 519 aaPredicted RBP11.29□□□□□ -0.6
DDX47-210ENST00000544400 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
DDX47-210ENST00000544400 PRKAR2AP13861 404 aaKnown RBP11.23□□□□□ -0.61
DDX47-210ENST00000544400 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
DDX47-210ENST00000544400 SSUH2Q9Y2M2 353 aa11.17□□□□□ -0.62
DDX47-210ENST00000544400 EVX2Q03828 476 aa11.15□□□□□ -0.62
DDX47-210ENST00000544400 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
DDX47-210ENST00000544400 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDX47-210ENST00000544400 C19orf67A6NJJ6 358 aa11.04□□□□□ -0.64
DDX47-210ENST00000544400 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
DDX47-210ENST00000544400 GABBR2O75899 941 aa10.95□□□□□ -0.66
DDX47-210ENST00000544400 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
DDX47-210ENST00000544400 CD44P16070 742 aaKnown RBP10.87□□□□□ -0.67
DDX47-210ENST00000544400 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
DDX47-210ENST00000544400 LHX8Q68G74 356 aa10.81□□□□□ -0.68
DDX47-210ENST00000544400 CLCN6P51797 869 aa10.8□□□□□ -0.68
DDX47-210ENST00000544400 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
DDX47-210ENST00000544400 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
DDX47-210ENST00000544400 CCDC180Q9P1Z9 1646 aa10.75□□□□□ -0.69
DDX47-210ENST00000544400 DCBLD2Q96PD2 775 aa10.72□□□□□ -0.69
DDX47-210ENST00000544400 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
DDX47-210ENST00000544400 ZRANB1Q9UGI0 708 aa10.7□□□□□ -0.7
DDX47-210ENST00000544400 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
DDX47-210ENST00000544400 PAK3O75914 559 aaPredicted RBP10.65□□□□□ -0.7
DDX47-210ENST00000544400 POTEIP0CG38 1075 aa10.64□□□□□ -0.71
DDX47-210ENST00000544400 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
DDX47-210ENST00000544400 NPM1P06748 294 aaKnown RBP eCLIP10.59□□□□□ -0.71
DDX47-210ENST00000544400 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
DDX47-210ENST00000544400 ZCCHC6Q5VYS8 1495 aaKnown RBP10.49□□□□□ -0.73
DDX47-210ENST00000544400 PHF12Q96QT6 1004 aa10.47□□□□□ -0.73
DDX47-210ENST00000544400 MNX1P50219 401 aaPredicted RBP10.41□□□□□ -0.74
DDX47-210ENST00000544400 PLEKHG5O94827 1062 aa10.38□□□□□ -0.75
DDX47-210ENST00000544400 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
DDX47-210ENST00000544400 DCAF1Q9Y4B6 1507 aa10.35□□□□□ -0.75
DDX47-210ENST00000544400 OTUD5Q96G74 571 aa10.33□□□□□ -0.76
DDX47-210ENST00000544400 MS4A3Q96HJ5 214 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms