RNA–Protein interactions for RNA: ENST00000538559.6

RMST-201, rhabdomyosarcoma 2 associated transcript, humanhuman

TSL 5

Gene RMST, Length 2,598 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMST-201ENST00000538559 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.12
RMST-201ENST00000538559 MYT1Q01538 1121 aa13.96□□□□□ -0.17
RMST-201ENST00000538559 NISCHQ9Y2I1 1504 aa13.89□□□□□ -0.19
RMST-201ENST00000538559 HRCP23327 699 aa13.8□□□□□ -0.2
RMST-201ENST00000538559 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
RMST-201ENST00000538559 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
RMST-201ENST00000538559 TTBK1Q5TCY1 1321 aaPredicted RBP13.3□□□□□ -0.28
RMST-201ENST00000538559 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
RMST-201ENST00000538559 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.3
RMST-201ENST00000538559 PRKCSHP14314 528 aaPredicted RBP13.15□□□□□ -0.3
RMST-201ENST00000538559 BCL11AQ9H165 835 aa13.08□□□□□ -0.32
RMST-201ENST00000538559 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
RMST-201ENST00000538559 ACIN1Q9UKV3 1341 aaKnown RBP12.91□□□□□ -0.34
RMST-201ENST00000538559 GTF3C3Q9Y5Q9 886 aa12.88□□□□□ -0.35
RMST-201ENST00000538559 NEUROD1Q13562 356 aa12.87□□□□□ -0.35
RMST-201ENST00000538559 CENPBP07199 599 aaPredicted RBP12.82□□□□□ -0.36
RMST-201ENST00000538559 MYO15BQ96JP2 1530 aa12.79□□□□□ -0.36
RMST-201ENST00000538559 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
RMST-201ENST00000538559 APLP2Q06481 763 aa12.68□□□□□ -0.38
RMST-201ENST00000538559 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
RMST-201ENST00000538559 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.4
RMST-201ENST00000538559 CHIC1Q5VXU3 224 aa12.57□□□□□ -0.4
RMST-201ENST00000538559 TRIM26Q12899 539 aaPredicted RBP12.54□□□□□ -0.4
RMST-201ENST00000538559 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
RMST-201ENST00000538559 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
RMST-201ENST00000538559 CCDC180Q9P1Z9 1646 aa12.45□□□□□ -0.42
RMST-201ENST00000538559 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
RMST-201ENST00000538559 DIEXFQ68CQ4 756 aaKnown RBP12.32□□□□□ -0.44
RMST-201ENST00000538559 YTHDC1Q96MU7 727 aaKnown RBP12.26□□□□□ -0.45
RMST-201ENST00000538559 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
RMST-201ENST00000538559 ANO8Q9HCE9 1232 aaPredicted RBP12.23□□□□□ -0.45
RMST-201ENST00000538559 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
RMST-201ENST00000538559 SHROOM4Q9ULL8 1493 aa12.13□□□□□ -0.47
RMST-201ENST00000538559 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
RMST-201ENST00000538559 SUPT16HQ9Y5B9 1047 aaKnown RBP12.06□□□□□ -0.48
RMST-201ENST00000538559 UBE2Q2Q8WVN8 375 aa12.02□□□□□ -0.49
RMST-201ENST00000538559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12□□□□□ -0.49
RMST-201ENST00000538559 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
RMST-201ENST00000538559 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
RMST-201ENST00000538559 SALL2Q9Y467 1007 aaPredicted RBP11.99□□□□□ -0.49
RMST-201ENST00000538559 CCER1Q8TC90 406 aaPredicted RBP11.97□□□□□ -0.49
RMST-201ENST00000538559 CCDC136Q96JN2 1154 aa11.97□□□□□ -0.49
RMST-201ENST00000538559 MIER1Q8N108 512 aa11.95□□□□□ -0.5
RMST-201ENST00000538559 CLSPNQ9HAW4 1339 aa11.89□□□□□ -0.51
RMST-201ENST00000538559 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
RMST-201ENST00000538559 RBM19Q9Y4C8 960 aaKnown RBP11.86□□□□□ -0.51
RMST-201ENST00000538559 MSH5O43196 834 aa11.84□□□□□ -0.51
RMST-201ENST00000538559 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
RMST-201ENST00000538559 DEKP35659 375 aaKnown RBP11.82□□□□□ -0.52
RMST-201ENST00000538559 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
RMST-201ENST00000538559 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
RMST-201ENST00000538559 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
RMST-201ENST00000538559 PKNOX2Q96KN3 472 aa11.76□□□□□ -0.53
RMST-201ENST00000538559 BCANQ96GW7 911 aa11.76□□□□□ -0.53
RMST-201ENST00000538559 ERICH6BQ5W0A0 696 aa11.75□□□□□ -0.53
RMST-201ENST00000538559 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
RMST-201ENST00000538559 PODXL2Q9NZ53 605 aa11.68□□□□□ -0.54
RMST-201ENST00000538559 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
RMST-201ENST00000538559 IL27Q8NEV9 243 aa11.63□□□□□ -0.55
RMST-201ENST00000538559 FKBP8Q14318 412 aa11.6□□□□□ -0.55
RMST-201ENST00000538559 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
RMST-201ENST00000538559 ITGAEP38570 1179 aa11.58□□□□□ -0.56
RMST-201ENST00000538559 NBR1Q14596 966 aa11.53□□□□□ -0.56
RMST-201ENST00000538559 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
RMST-201ENST00000538559 NEFLP07196 543 aa11.41□□□□□ -0.58
RMST-201ENST00000538559 ZMYND15Q9H091 742 aa11.39□□□□□ -0.59
RMST-201ENST00000538559 TIMELESSQ9UNS1 1208 aa11.39□□□□□ -0.59
RMST-201ENST00000538559 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
RMST-201ENST00000538559 CDK11AQ9UQ88 783 aaPredicted RBP11.37□□□□□ -0.59
RMST-201ENST00000538559 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
RMST-201ENST00000538559 NOP58Q9Y2X3 529 aaKnown RBP11.35□□□□□ -0.59
RMST-201ENST00000538559 RTL5Q5HYW3 569 aaPredicted RBP11.34□□□□□ -0.59
RMST-201ENST00000538559 VSIG10Q8N0Z9 540 aa11.33□□□□□ -0.6
RMST-201ENST00000538559 GLIPR1L2Q4G1C9 344 aa11.31□□□□□ -0.6
RMST-201ENST00000538559 A0A0U1RQG5 324 aaPredicted RBP11.28□□□□□ -0.6
RMST-201ENST00000538559 PHF23Q9BUL5 403 aaPredicted RBP11.26□□□□□ -0.61
RMST-201ENST00000538559 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
RMST-201ENST00000538559 C11orf95C9JLR9 678 aaPredicted RBP11.22□□□□□ -0.61
RMST-201ENST00000538559 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
RMST-201ENST00000538559 PDE4CQ08493 712 aa11.21□□□□□ -0.62
RMST-201ENST00000538559 FGD1P98174 961 aa11.2□□□□□ -0.62
RMST-201ENST00000538559 IRX6P78412 446 aaPredicted RBP11.19□□□□□ -0.62
RMST-201ENST00000538559 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
RMST-201ENST00000538559 WASHC2AQ641Q2 1341 aa11.18□□□□□ -0.62
RMST-201ENST00000538559 RBM10P98175 930 aaKnown RBP11.17□□□□□ -0.62
RMST-201ENST00000538559 ABCC9O60706 1549 aa11.16□□□□□ -0.62
RMST-201ENST00000538559 AAMPQ13685 434 aa11.16□□□□□ -0.62
RMST-201ENST00000538559 WASHC2CQ9Y4E1 1318 aa11.15□□□□□ -0.62
RMST-201ENST00000538559 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
RMST-201ENST00000538559 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
RMST-201ENST00000538559 PDIA4P13667 645 aaKnown RBP11.12□□□□□ -0.63
RMST-201ENST00000538559 IPO9Q96P70 1041 aaKnown RBP11.12□□□□□ -0.63
RMST-201ENST00000538559 NEFMP07197 916 aa11.1□□□□□ -0.63
RMST-201ENST00000538559 BCL11BQ9C0K0 894 aaPredicted RBP11.1□□□□□ -0.63
RMST-201ENST00000538559 ANP32AP39687 249 aaKnown RBP11.08□□□□□ -0.64
RMST-201ENST00000538559 USP35Q9P2H5 1018 aa11.05□□□□□ -0.64
RMST-201ENST00000538559 LAS1LQ9Y4W2 734 aaKnown RBP11.05□□□□□ -0.64
RMST-201ENST00000538559 HSP90AA2PQ14568 343 aaPredicted RBP11.04□□□□□ -0.64
RMST-201ENST00000538559 PPP4R2Q9NY27 417 aa11.04□□□□□ -0.64
RMST-201ENST00000538559 B4GALNT3Q6L9W6 998 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms