RNA–Protein interactions for RNA: ENST00000532146.1

CELF1-216, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 3

Gene CELF1, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-216ENST00000532146 AEBP2Q6ZN18 517 aaPredicted RBP19■□□□□ 0.63
CELF1-216ENST00000532146 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
CELF1-216ENST00000532146 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
CELF1-216ENST00000532146 PHF23Q9BUL5 403 aaPredicted RBP16.16■□□□□ 0.18
CELF1-216ENST00000532146 FOXD1Q16676 465 aa15.28■□□□□ 0.04
CELF1-216ENST00000532146 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
CELF1-216ENST00000532146 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
CELF1-216ENST00000532146 MSH5O43196 834 aa14.58□□□□□ -0.08
CELF1-216ENST00000532146 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
CELF1-216ENST00000532146 ADRA2BP18089 450 aa14.27□□□□□ -0.13
CELF1-216ENST00000532146 PIAS4Q8N2W9 510 aaPredicted RBP14.2□□□□□ -0.14
CELF1-216ENST00000532146 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
CELF1-216ENST00000532146 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
CELF1-216ENST00000532146 CACNB1Q02641 598 aaPredicted RBP12.89□□□□□ -0.35
CELF1-216ENST00000532146 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
CELF1-216ENST00000532146 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
CELF1-216ENST00000532146 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
CELF1-216ENST00000532146 KCNA4P22459 653 aa12.59□□□□□ -0.39
CELF1-216ENST00000532146 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
CELF1-216ENST00000532146 DCAF8L1A6NGE4 600 aa12.47□□□□□ -0.41
CELF1-216ENST00000532146 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
CELF1-216ENST00000532146 HOXD11P31277 338 aaPredicted RBP12.45□□□□□ -0.42
CELF1-216ENST00000532146 RNF216Q9NWF9 866 aaPredicted RBP12.43□□□□□ -0.42
CELF1-216ENST00000532146 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
CELF1-216ENST00000532146 C1QBPQ07021 282 aaKnown RBP12.17□□□□□ -0.46
CELF1-216ENST00000532146 DNAJC5BQ9UF47 199 aa12.06□□□□□ -0.48
CELF1-216ENST00000532146 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
CELF1-216ENST00000532146 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
CELF1-216ENST00000532146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.524e-7■■□□□ 12.9
CELF1-216ENST00000532146 POTEHQ6S545 545 aa11.8□□□□□ -0.52
CELF1-216ENST00000532146 U3KPZ7 1027 aaPredicted RBP11.68□□□□□ -0.54
CELF1-216ENST00000532146 ZBTB22O15209 634 aa11.63□□□□□ -0.55
CELF1-216ENST00000532146 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
CELF1-216ENST00000532146 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
CELF1-216ENST00000532146 EHMT2Q96KQ7 1210 aa11.43□□□□□ -0.58
CELF1-216ENST00000532146 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
CELF1-216ENST00000532146 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
CELF1-216ENST00000532146 CAPN15O75808 1086 aa11.37□□□□□ -0.59
CELF1-216ENST00000532146 DSG3P32926 999 aa11.37□□□□□ -0.59
CELF1-216ENST00000532146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
CELF1-216ENST00000532146 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
CELF1-216ENST00000532146 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
CELF1-216ENST00000532146 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
CELF1-216ENST00000532146 TRHP20396 242 aaPredicted RBP11.25□□□□□ -0.61
CELF1-216ENST00000532146 APLP2Q06481 763 aa11.22□□□□□ -0.61
CELF1-216ENST00000532146 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
CELF1-216ENST00000532146 ABCB7O75027 752 aa11.15□□□□□ -0.62
CELF1-216ENST00000532146 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
CELF1-216ENST00000532146 POLA2Q14181 598 aa11.04□□□□□ -0.64
CELF1-216ENST00000532146 RBM42Q9BTD8 480 aaKnown RBP10.93□□□□□ -0.66
CELF1-216ENST00000532146 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
CELF1-216ENST00000532146 SP7Q8TDD2 431 aaPredicted RBP10.79□□□□□ -0.68
CELF1-216ENST00000532146 MKRN4PQ13434 485 aaPredicted RBP10.77□□□□□ -0.69
CELF1-216ENST00000532146 ZBTB12Q9Y330 459 aaPredicted RBP10.73□□□□□ -0.69
CELF1-216ENST00000532146 OSCARQ8IYS5 282 aa10.68□□□□□ -0.7
CELF1-216ENST00000532146 FBLN2P98095 1184 aa10.66□□□□□ -0.7
CELF1-216ENST00000532146 AKT1S1Q96B36 256 aa10.52□□□□□ -0.73
CELF1-216ENST00000532146 HAX1O00165 279 aa10.51□□□□□ -0.73
CELF1-216ENST00000532146 SPDYE2BA6NHP3 402 aa10.48□□□□□ -0.73
CELF1-216ENST00000532146 SPDYE6P0CI01 402 aa10.48□□□□□ -0.73
CELF1-216ENST00000532146 SPDYE2Q495Y8 402 aa10.48□□□□□ -0.73
CELF1-216ENST00000532146 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
CELF1-216ENST00000532146 NISCHQ9Y2I1 1504 aa10.44□□□□□ -0.74
CELF1-216ENST00000532146 ZNF692Q9BU19 519 aaPredicted RBP10.44□□□□□ -0.74
CELF1-216ENST00000532146 SSUH2Q9Y2M2 353 aa10.43□□□□□ -0.74
CELF1-216ENST00000532146 REM2Q8IYK8 340 aaPredicted RBP10.41□□□□□ -0.74
CELF1-216ENST00000532146 SPDYE4A6NLX3 237 aa10.38□□□□□ -0.75
CELF1-216ENST00000532146 PABPN1Q86U42 306 aaKnown RBP eCLIP10.32□□□□□ -0.76
CELF1-216ENST00000532146 PITPNM1O00562 1244 aa10.31□□□□□ -0.76
CELF1-216ENST00000532146 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.76
CELF1-216ENST00000532146 FKBP8Q14318 412 aa10.26□□□□□ -0.77
CELF1-216ENST00000532146 EVX2Q03828 476 aa10.24□□□□□ -0.77
CELF1-216ENST00000532146 PROM2Q8N271 834 aa10.21□□□□□ -0.77
CELF1-216ENST00000532146 SPDYE1Q8NFV5 336 aaPredicted RBP10.2□□□□□ -0.78
CELF1-216ENST00000532146 CLEC11AQ9Y240 323 aa10.2□□□□□ -0.78
CELF1-216ENST00000532146 LHX8Q68G74 356 aa10.12□□□□□ -0.79
CELF1-216ENST00000532146 PRR29P0C7W0 189 aa10.07□□□□□ -0.8
CELF1-216ENST00000532146 PRKAR2AP13861 404 aaKnown RBP10.06□□□□□ -0.8
CELF1-216ENST00000532146 CHADLQ6NUI6 762 aa10.03□□□□□ -0.8
CELF1-216ENST00000532146 STAG3Q9UJ98 1225 aa10.03□□□□□ -0.8
CELF1-216ENST00000532146 GABBR2O75899 941 aa10.02□□□□□ -0.81
CELF1-216ENST00000532146 PLSCR2Q9NRY7 297 aa10.02□□□□□ -0.81
CELF1-216ENST00000532146 C19orf67A6NJJ6 358 aa10.01□□□□□ -0.81
CELF1-216ENST00000532146 CREBZFQ9NS37 354 aa9.98□□□□□ -0.81
CELF1-216ENST00000532146 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
CELF1-216ENST00000532146 FARP1Q9Y4F1 1045 aaPredicted RBP9.87□□□□□ -0.83
CELF1-216ENST00000532146 MIER1Q8N108 512 aa9.85□□□□□ -0.83
CELF1-216ENST00000532146 FBXO3Q9UK99 471 aa9.84□□□□□ -0.83
CELF1-216ENST00000532146 VASPP50552 380 aaPredicted RBP9.8□□□□□ -0.84
CELF1-216ENST00000532146 PLCD3Q8N3E9 789 aa9.79□□□□□ -0.84
CELF1-216ENST00000532146 POTEIP0CG38 1075 aa9.76□□□□□ -0.85
CELF1-216ENST00000532146 CD44P16070 742 aaKnown RBP9.72□□□□□ -0.85
CELF1-216ENST00000532146 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
CELF1-216ENST00000532146 DCBLD2Q96PD2 775 aa9.7□□□□□ -0.86
CELF1-216ENST00000532146 PLEKHG5O94827 1062 aa9.69□□□□□ -0.86
CELF1-216ENST00000532146 NPM1P06748 294 aaKnown RBP eCLIP9.69□□□□□ -0.86
CELF1-216ENST00000532146 CLCN6P51797 869 aa9.69□□□□□ -0.86
CELF1-216ENST00000532146 NUBP1P53384 320 aa9.66□□□□□ -0.86
CELF1-216ENST00000532146 RASEFQ8IZ41 740 aa9.66□□□□□ -0.86
CELF1-216ENST00000532146 ZRANB1Q9UGI0 708 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms