RNA–Protein interactions for RNA: ENST00000531884.1

KCNMB4-202, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 4, humanhuman

TSL 2

Gene KCNMB4, Length 472 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB4-202ENST00000531884 AEBP2Q6ZN18 517 aaPredicted RBP32.15■■■□□ 2.74
KCNMB4-202ENST00000531884 CHIC1Q5VXU3 224 aa31.78■■■□□ 2.68
KCNMB4-202ENST00000531884 PHF23Q9BUL5 403 aaPredicted RBP28.02■■■□□ 2.08
KCNMB4-202ENST00000531884 SENP3Q9H4L4 574 aaPredicted RBP27.17■■□□□ 1.94
KCNMB4-202ENST00000531884 PLPPR3Q6T4P5 718 aa25.98■■□□□ 1.75
KCNMB4-202ENST00000531884 FOXD1Q16676 465 aa25.2■■□□□ 1.62
KCNMB4-202ENST00000531884 ADRA2BP18089 450 aa24.61■■□□□ 1.53
KCNMB4-202ENST00000531884 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
KCNMB4-202ENST00000531884 PIAS4Q8N2W9 510 aaPredicted RBP23.87■■□□□ 1.41
KCNMB4-202ENST00000531884 MSH5O43196 834 aa23.03■■□□□ 1.28
KCNMB4-202ENST00000531884 PPP4R3CPQ6ZMV5 832 aa22.97■■□□□ 1.27
KCNMB4-202ENST00000531884 KCNA4P22459 653 aa22.93■■□□□ 1.26
KCNMB4-202ENST00000531884 NCBP3Q53F19 620 aaKnown RBP22.46■■□□□ 1.19
KCNMB4-202ENST00000531884 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
KCNMB4-202ENST00000531884 CNKSR2Q8WXI2 1034 aa22.22■■□□□ 1.15
KCNMB4-202ENST00000531884 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
KCNMB4-202ENST00000531884 NPM3O75607 178 aaKnown RBP22.16■■□□□ 1.14
KCNMB4-202ENST00000531884 SLC4A1APQ9BWU0 796 aaKnown RBP21.89■■□□□ 1.09
KCNMB4-202ENST00000531884 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
KCNMB4-202ENST00000531884 DMRT2Q9Y5R5 561 aa21.76■■□□□ 1.07
KCNMB4-202ENST00000531884 RNF216Q9NWF9 866 aaPredicted RBP21.67■■□□□ 1.06
KCNMB4-202ENST00000531884 HOXD11P31277 338 aaPredicted RBP21.47■■□□□ 1.03
KCNMB4-202ENST00000531884 DNAJC5BQ9UF47 199 aa21.38■■□□□ 1.01
KCNMB4-202ENST00000531884 CSRNP3Q8WYN3 585 aa21.33■■□□□ 1.01
KCNMB4-202ENST00000531884 ZBTB22O15209 634 aa21.11■□□□□ 0.97
KCNMB4-202ENST00000531884 FOXD4L1Q9NU39 408 aa20.95■□□□□ 0.94
KCNMB4-202ENST00000531884 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
KCNMB4-202ENST00000531884 SLC4A2P04920 1241 aa20.83■□□□□ 0.93
KCNMB4-202ENST00000531884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.87
KCNMB4-202ENST00000531884 MYCNP04198 464 aaPredicted RBP20.45■□□□□ 0.86
KCNMB4-202ENST00000531884 POTEDQ86YR6 584 aa20.28■□□□□ 0.84
KCNMB4-202ENST00000531884 U3KPZ7 1027 aaPredicted RBP20.21■□□□□ 0.83
KCNMB4-202ENST00000531884 ATXN8OSP0DMR3 200 aa20.16■□□□□ 0.82
KCNMB4-202ENST00000531884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.05■□□□□ 0.8
KCNMB4-202ENST00000531884 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
KCNMB4-202ENST00000531884 SAMD1Q6SPF0 538 aaPredicted RBP20.01■□□□□ 0.79
KCNMB4-202ENST00000531884 ATF5Q9Y2D1 282 aaPredicted RBP19.92■□□□□ 0.78
KCNMB4-202ENST00000531884 RNF39Q9H2S5 420 aa19.79■□□□□ 0.76
KCNMB4-202ENST00000531884 APLP2Q06481 763 aa19.73■□□□□ 0.75
KCNMB4-202ENST00000531884 C1QBPQ07021 282 aaKnown RBP19.57■□□□□ 0.72
KCNMB4-202ENST00000531884 SPINK5Q9NQ38 1064 aaPredicted RBP19.54■□□□□ 0.72
KCNMB4-202ENST00000531884 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
KCNMB4-202ENST00000531884 TRHP20396 242 aaPredicted RBP19.45■□□□□ 0.7
KCNMB4-202ENST00000531884 CAPN15O75808 1086 aa19.43■□□□□ 0.7
KCNMB4-202ENST00000531884 FKBP8Q14318 412 aa19.26■□□□□ 0.67
KCNMB4-202ENST00000531884 POLA2Q14181 598 aa19.22■□□□□ 0.67
KCNMB4-202ENST00000531884 ABCB7O75027 752 aa19.12■□□□□ 0.65
KCNMB4-202ENST00000531884 MKRN4PQ13434 485 aaPredicted RBP19.06■□□□□ 0.64
KCNMB4-202ENST00000531884 FBLN2P98095 1184 aa19.01■□□□□ 0.63
KCNMB4-202ENST00000531884 DSG3P32926 999 aa19■□□□□ 0.63
KCNMB4-202ENST00000531884 CACNB1Q02641 598 aaPredicted RBP19■□□□□ 0.63
KCNMB4-202ENST00000531884 ZBTB12Q9Y330 459 aaPredicted RBP18.88■□□□□ 0.61
KCNMB4-202ENST00000531884 SPDYE4A6NLX3 237 aa18.82■□□□□ 0.6
KCNMB4-202ENST00000531884 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
KCNMB4-202ENST00000531884 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
KCNMB4-202ENST00000531884 PROM2Q8N271 834 aa18.54■□□□□ 0.56
KCNMB4-202ENST00000531884 ZNF692Q9BU19 519 aaPredicted RBP18.45■□□□□ 0.54
KCNMB4-202ENST00000531884 SPDYE2BA6NHP3 402 aa18.42■□□□□ 0.54
KCNMB4-202ENST00000531884 SPDYE6P0CI01 402 aa18.42■□□□□ 0.54
KCNMB4-202ENST00000531884 SPDYE2Q495Y8 402 aa18.42■□□□□ 0.54
KCNMB4-202ENST00000531884 FBXO3Q9UK99 471 aa18.42■□□□□ 0.54
KCNMB4-202ENST00000531884 SSUH2Q9Y2M2 353 aa18.33■□□□□ 0.52
KCNMB4-202ENST00000531884 AMER1Q5JTC6 1135 aaPredicted RBP18.25■□□□□ 0.51
KCNMB4-202ENST00000531884 RTN4Q9NQC3 1192 aaKnown RBP18.25■□□□□ 0.51
KCNMB4-202ENST00000531884 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
KCNMB4-202ENST00000531884 VASPP50552 380 aaPredicted RBP18.17■□□□□ 0.5
KCNMB4-202ENST00000531884 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
KCNMB4-202ENST00000531884 STAG3Q9UJ98 1225 aa18.01■□□□□ 0.47
KCNMB4-202ENST00000531884 IFNLR1Q8IU57 520 aaPredicted RBP17.97■□□□□ 0.47
KCNMB4-202ENST00000531884 AKT1S1Q96B36 256 aa17.94■□□□□ 0.46
KCNMB4-202ENST00000531884 PLCD3Q8N3E9 789 aa17.83■□□□□ 0.44
KCNMB4-202ENST00000531884 MIER1Q8N108 512 aa17.82■□□□□ 0.44
KCNMB4-202ENST00000531884 REM2Q8IYK8 340 aaPredicted RBP17.79■□□□□ 0.44
KCNMB4-202ENST00000531884 KLHL34Q8N239 644 aa17.79■□□□□ 0.44
KCNMB4-202ENST00000531884 SPDYE1Q8NFV5 336 aaPredicted RBP17.79■□□□□ 0.44
KCNMB4-202ENST00000531884 CLEC11AQ9Y240 323 aa17.73■□□□□ 0.43
KCNMB4-202ENST00000531884 SPOCK2Q92563 424 aa17.68■□□□□ 0.42
KCNMB4-202ENST00000531884 PLEKHG5O94827 1062 aa17.66■□□□□ 0.42
KCNMB4-202ENST00000531884 PRR29P0C7W0 189 aa17.61■□□□□ 0.41
KCNMB4-202ENST00000531884 PITPNM1O00562 1244 aa17.58■□□□□ 0.4
KCNMB4-202ENST00000531884 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
KCNMB4-202ENST00000531884 PKD2Q13563 968 aa17.53■□□□□ 0.4
KCNMB4-202ENST00000531884 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
KCNMB4-202ENST00000531884 CIZ1Q9ULV3 898 aaPredicted RBP17.36■□□□□ 0.37
KCNMB4-202ENST00000531884 ECM2O94769 699 aaPredicted RBP17.35■□□□□ 0.37
KCNMB4-202ENST00000531884 MNX1P50219 401 aaPredicted RBP17.35■□□□□ 0.37
KCNMB4-202ENST00000531884 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
KCNMB4-202ENST00000531884 NUBP1P53384 320 aa17.31■□□□□ 0.36
KCNMB4-202ENST00000531884 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
KCNMB4-202ENST00000531884 GSE1Q14687 1217 aa17.21■□□□□ 0.35
KCNMB4-202ENST00000531884 DCAF8Q5TAQ9 597 aa17.2■□□□□ 0.34
KCNMB4-202ENST00000531884 NPM1P06748 294 aaKnown RBP eCLIP17.18■□□□□ 0.34
KCNMB4-202ENST00000531884 RGL2O15211 777 aa17.17■□□□□ 0.34
KCNMB4-202ENST00000531884 FXR2P51116 673 aaKnown RBP eCLIP17.16■□□□□ 0.34
KCNMB4-202ENST00000531884 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
KCNMB4-202ENST00000531884 PRKAR2AP13861 404 aaKnown RBP17.15■□□□□ 0.34
KCNMB4-202ENST00000531884 RASEFQ8IZ41 740 aa17.15■□□□□ 0.34
KCNMB4-202ENST00000531884 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
KCNMB4-202ENST00000531884 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
KCNMB4-202ENST00000531884 FAM212AQ96EL1 285 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms