RNA–Protein interactions for RNA: ENST00000530869.1

CHRNA6-203, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 4

Gene CHRNA6, Length 608 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-203ENST00000530869 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
CHRNA6-203ENST00000530869 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
CHRNA6-203ENST00000530869 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
CHRNA6-203ENST00000530869 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
CHRNA6-203ENST00000530869 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
CHRNA6-203ENST00000530869 FOXD1Q16676 465 aa13.99□□□□□ -0.17
CHRNA6-203ENST00000530869 PPP6R1Q9UPN7 881 aa13.67□□□□□ -0.22
CHRNA6-203ENST00000530869 ADRA2BP18089 450 aa13.63□□□□□ -0.23
CHRNA6-203ENST00000530869 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
CHRNA6-203ENST00000530869 MSH5O43196 834 aa12.8□□□□□ -0.36
CHRNA6-203ENST00000530869 KCNA4P22459 653 aa12.79□□□□□ -0.36
CHRNA6-203ENST00000530869 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
CHRNA6-203ENST00000530869 NCBP3Q53F19 620 aaKnown RBP12.5□□□□□ -0.41
CHRNA6-203ENST00000530869 SCAF1Q9H7N4 1312 aaKnown RBP12.47□□□□□ -0.41
CHRNA6-203ENST00000530869 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
CHRNA6-203ENST00000530869 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
CHRNA6-203ENST00000530869 MAPK8IP2Q13387 824 aaPredicted RBP12.28□□□□□ -0.44
CHRNA6-203ENST00000530869 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
CHRNA6-203ENST00000530869 DMRT2Q9Y5R5 561 aa12.13□□□□□ -0.47
CHRNA6-203ENST00000530869 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
CHRNA6-203ENST00000530869 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
CHRNA6-203ENST00000530869 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
CHRNA6-203ENST00000530869 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
CHRNA6-203ENST00000530869 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
CHRNA6-203ENST00000530869 ZBTB22O15209 634 aa11.82□□□□□ -0.52
CHRNA6-203ENST00000530869 FOXD4L1Q9NU39 408 aa11.71□□□□□ -0.53
CHRNA6-203ENST00000530869 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
CHRNA6-203ENST00000530869 SLC24A1O60721 1099 aa11.51□□□□□ -0.57
CHRNA6-203ENST00000530869 DCAF8L1A6NGE4 600 aa11.42□□□□□ -0.58
CHRNA6-203ENST00000530869 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
CHRNA6-203ENST00000530869 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
CHRNA6-203ENST00000530869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHRNA6-203ENST00000530869 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
CHRNA6-203ENST00000530869 POTEDQ86YR6 584 aa11.19□□□□□ -0.62
CHRNA6-203ENST00000530869 NISCHQ9Y2I1 1504 aa11.18□□□□□ -0.62
CHRNA6-203ENST00000530869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
CHRNA6-203ENST00000530869 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
CHRNA6-203ENST00000530869 SAMD1Q6SPF0 538 aaPredicted RBP11.15□□□□□ -0.62
CHRNA6-203ENST00000530869 ATF5Q9Y2D1 282 aaPredicted RBP11.09□□□□□ -0.63
CHRNA6-203ENST00000530869 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
CHRNA6-203ENST00000530869 APLP2Q06481 763 aa10.99□□□□□ -0.65
CHRNA6-203ENST00000530869 C1QBPQ07021 282 aaKnown RBP10.88□□□□□ -0.67
CHRNA6-203ENST00000530869 ZNF219Q9P2Y4 722 aaPredicted RBP10.87□□□□□ -0.67
CHRNA6-203ENST00000530869 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
CHRNA6-203ENST00000530869 CAPN15O75808 1086 aa10.71□□□□□ -0.69
CHRNA6-203ENST00000530869 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
CHRNA6-203ENST00000530869 FKBP8Q14318 412 aa10.71□□□□□ -0.69
CHRNA6-203ENST00000530869 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
CHRNA6-203ENST00000530869 POLA2Q14181 598 aa10.64□□□□□ -0.71
CHRNA6-203ENST00000530869 DNAJC5Q9H3Z4 198 aa10.64□□□□□ -0.71
CHRNA6-203ENST00000530869 ABCC9O60706 1549 aa10.58□□□□□ -0.72
CHRNA6-203ENST00000530869 DSG3P32926 999 aa10.56□□□□□ -0.72
CHRNA6-203ENST00000530869 FBLN2P98095 1184 aa10.55□□□□□ -0.72
CHRNA6-203ENST00000530869 ABCB7O75027 752 aa10.54□□□□□ -0.72
CHRNA6-203ENST00000530869 DAXXQ9UER7 740 aaPredicted RBP10.54□□□□□ -0.72
CHRNA6-203ENST00000530869 ZBTB12Q9Y330 459 aaPredicted RBP10.53□□□□□ -0.72
CHRNA6-203ENST00000530869 MYT1Q01538 1121 aa10.49□□□□□ -0.73
CHRNA6-203ENST00000530869 PROM2Q8N271 834 aa10.48□□□□□ -0.73
CHRNA6-203ENST00000530869 SPDYE4A6NLX3 237 aa10.47□□□□□ -0.73
CHRNA6-203ENST00000530869 TTBK1Q5TCY1 1321 aaPredicted RBP10.45□□□□□ -0.74
CHRNA6-203ENST00000530869 CACNB1Q02641 598 aaPredicted RBP10.44□□□□□ -0.74
CHRNA6-203ENST00000530869 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
CHRNA6-203ENST00000530869 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
CHRNA6-203ENST00000530869 SPDYE2BA6NHP3 402 aa10.27□□□□□ -0.77
CHRNA6-203ENST00000530869 SPDYE6P0CI01 402 aa10.27□□□□□ -0.77
CHRNA6-203ENST00000530869 SPDYE2Q495Y8 402 aa10.27□□□□□ -0.77
CHRNA6-203ENST00000530869 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
CHRNA6-203ENST00000530869 PELP1Q8IZL8 1130 aaKnown RBP10.27□□□□□ -0.77
CHRNA6-203ENST00000530869 SSUH2Q9Y2M2 353 aa10.27□□□□□ -0.77
CHRNA6-203ENST00000530869 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
CHRNA6-203ENST00000530869 ZNF692Q9BU19 519 aaPredicted RBP10.21□□□□□ -0.77
CHRNA6-203ENST00000530869 VASPP50552 380 aaPredicted RBP10.16□□□□□ -0.78
CHRNA6-203ENST00000530869 ERICH6Q7L0X2 663 aa10.14□□□□□ -0.79
CHRNA6-203ENST00000530869 PABPN1Q86U42 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHRNA6-203ENST00000530869 IFNLR1Q8IU57 520 aaPredicted RBP10.05□□□□□ -0.8
CHRNA6-203ENST00000530869 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
CHRNA6-203ENST00000530869 RBM42Q9BTD8 480 aaKnown RBP10.03□□□□□ -0.8
CHRNA6-203ENST00000530869 AKT1S1Q96B36 256 aa9.97□□□□□ -0.81
CHRNA6-203ENST00000530869 PRKCSHP14314 528 aaPredicted RBP9.95□□□□□ -0.82
CHRNA6-203ENST00000530869 ARXQ96QS3 562 aa9.95□□□□□ -0.82
CHRNA6-203ENST00000530869 SPDYE1Q8NFV5 336 aaPredicted RBP9.87□□□□□ -0.83
CHRNA6-203ENST00000530869 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
CHRNA6-203ENST00000530869 PLCD3Q8N3E9 789 aa9.86□□□□□ -0.83
CHRNA6-203ENST00000530869 CCDC180Q9P1Z9 1646 aa9.85□□□□□ -0.83
CHRNA6-203ENST00000530869 SPOCK2Q92563 424 aa9.85□□□□□ -0.83
CHRNA6-203ENST00000530869 MIER1Q8N108 512 aa9.84□□□□□ -0.83
CHRNA6-203ENST00000530869 PKD2Q13563 968 aa9.83□□□□□ -0.84
CHRNA6-203ENST00000530869 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
CHRNA6-203ENST00000530869 KLHL34Q8N239 644 aa9.81□□□□□ -0.84
CHRNA6-203ENST00000530869 ZBTB47Q9UFB7 747 aaPredicted RBP9.8□□□□□ -0.84
CHRNA6-203ENST00000530869 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
CHRNA6-203ENST00000530869 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
CHRNA6-203ENST00000530869 PITPNM1O00562 1244 aa9.76□□□□□ -0.85
CHRNA6-203ENST00000530869 CREBZFQ9NS37 354 aa9.74□□□□□ -0.85
CHRNA6-203ENST00000530869 CLEC11AQ9Y240 323 aa9.74□□□□□ -0.85
CHRNA6-203ENST00000530869 PRR29P0C7W0 189 aa9.73□□□□□ -0.85
CHRNA6-203ENST00000530869 MNX1P50219 401 aaPredicted RBP9.72□□□□□ -0.85
CHRNA6-203ENST00000530869 NUBP1P53384 320 aa9.67□□□□□ -0.86
CHRNA6-203ENST00000530869 TIMELESSQ9UNS1 1208 aa9.67□□□□□ -0.86
CHRNA6-203ENST00000530869 ECM2O94769 699 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms