RNA–Protein interactions for RNA: ENST00000530163.1

POLD3-205, Transcript of DNA polymerase delta 3, accessory subunit, humanhuman

TSL 1 (best)

Gene POLD3, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD3-205ENST00000530163 AEBP2Q6ZN18 517 aaPredicted RBP18.71■□□□□ 0.59
POLD3-205ENST00000530163 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
POLD3-205ENST00000530163 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
POLD3-205ENST00000530163 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
POLD3-205ENST00000530163 PLPPR3Q6T4P5 718 aa15.04■□□□□ -0
POLD3-205ENST00000530163 FOXD1Q16676 465 aa14.7□□□□□ -0.06
POLD3-205ENST00000530163 PPP6R1Q9UPN7 881 aa14.26□□□□□ -0.13
POLD3-205ENST00000530163 ADRA2BP18089 450 aa14.22□□□□□ -0.13
POLD3-205ENST00000530163 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
POLD3-205ENST00000530163 MSH5O43196 834 aa13.54□□□□□ -0.24
POLD3-205ENST00000530163 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
POLD3-205ENST00000530163 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
POLD3-205ENST00000530163 KCNA4P22459 653 aa13.06□□□□□ -0.32
POLD3-205ENST00000530163 POTEDQ86YR6 584 aa13.06□□□□□ -0.32
POLD3-205ENST00000530163 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
POLD3-205ENST00000530163 CNKSR2Q8WXI2 1034 aa12.87□□□□□ -0.35
POLD3-205ENST00000530163 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
POLD3-205ENST00000530163 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
POLD3-205ENST00000530163 DMRT2Q9Y5R5 561 aa12.71□□□□□ -0.37
POLD3-205ENST00000530163 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
POLD3-205ENST00000530163 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
POLD3-205ENST00000530163 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
POLD3-205ENST00000530163 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
POLD3-205ENST00000530163 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
POLD3-205ENST00000530163 CSRNP3Q8WYN3 585 aa12.09□□□□□ -0.47
POLD3-205ENST00000530163 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
POLD3-205ENST00000530163 ZBTB22O15209 634 aa12.02□□□□□ -0.49
POLD3-205ENST00000530163 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
POLD3-205ENST00000530163 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
POLD3-205ENST00000530163 NISCHQ9Y2I1 1504 aa11.91□□□□□ -0.5
POLD3-205ENST00000530163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.51
POLD3-205ENST00000530163 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
POLD3-205ENST00000530163 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
POLD3-205ENST00000530163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
POLD3-205ENST00000530163 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
POLD3-205ENST00000530163 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
POLD3-205ENST00000530163 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
POLD3-205ENST00000530163 SAMD1Q6SPF0 538 aaPredicted RBP11.6□□□□□ -0.55
POLD3-205ENST00000530163 C1QBPQ07021 282 aaKnown RBP11.51□□□□□ -0.57
POLD3-205ENST00000530163 APLP2Q06481 763 aa11.49□□□□□ -0.57
POLD3-205ENST00000530163 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
POLD3-205ENST00000530163 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
POLD3-205ENST00000530163 ZNF219Q9P2Y4 722 aaPredicted RBP11.28□□□□□ -0.6
POLD3-205ENST00000530163 CAPN15O75808 1086 aa11.24□□□□□ -0.61
POLD3-205ENST00000530163 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.61
POLD3-205ENST00000530163 CACNB1Q02641 598 aaPredicted RBP11.16□□□□□ -0.62
POLD3-205ENST00000530163 POLA2Q14181 598 aa11.11□□□□□ -0.63
POLD3-205ENST00000530163 DSG3P32926 999 aa11.08□□□□□ -0.64
POLD3-205ENST00000530163 ABCB7O75027 752 aa11.01□□□□□ -0.65
POLD3-205ENST00000530163 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
POLD3-205ENST00000530163 MKRN4PQ13434 485 aaPredicted RBP10.96□□□□□ -0.65
POLD3-205ENST00000530163 FBLN2P98095 1184 aa10.95□□□□□ -0.66
POLD3-205ENST00000530163 FKBP8Q14318 412 aa10.86□□□□□ -0.67
POLD3-205ENST00000530163 SPDYE4A6NLX3 237 aa10.76□□□□□ -0.69
POLD3-205ENST00000530163 SPDYE2BA6NHP3 402 aa10.69□□□□□ -0.7
POLD3-205ENST00000530163 SPDYE6P0CI01 402 aa10.69□□□□□ -0.7
POLD3-205ENST00000530163 SPDYE2Q495Y8 402 aa10.69□□□□□ -0.7
POLD3-205ENST00000530163 OSCARQ8IYS5 282 aa10.68□□□□□ -0.7
POLD3-205ENST00000530163 PROM2Q8N271 834 aa10.68□□□□□ -0.7
POLD3-205ENST00000530163 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
POLD3-205ENST00000530163 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
POLD3-205ENST00000530163 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
POLD3-205ENST00000530163 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
POLD3-205ENST00000530163 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
POLD3-205ENST00000530163 AKT1S1Q96B36 256 aa10.47□□□□□ -0.73
POLD3-205ENST00000530163 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.74
POLD3-205ENST00000530163 REM2Q8IYK8 340 aaPredicted RBP10.35□□□□□ -0.75
POLD3-205ENST00000530163 SPDYE1Q8NFV5 336 aaPredicted RBP10.33□□□□□ -0.76
POLD3-205ENST00000530163 VASPP50552 380 aaPredicted RBP10.32□□□□□ -0.76
POLD3-205ENST00000530163 CCDC180Q9P1Z9 1646 aa10.32□□□□□ -0.76
POLD3-205ENST00000530163 IFNLR1Q8IU57 520 aaPredicted RBP10.21□□□□□ -0.77
POLD3-205ENST00000530163 PITPNM1O00562 1244 aa10.2□□□□□ -0.78
POLD3-205ENST00000530163 CLEC11AQ9Y240 323 aa10.2□□□□□ -0.78
POLD3-205ENST00000530163 MIER1Q8N108 512 aa10.19□□□□□ -0.78
POLD3-205ENST00000530163 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
POLD3-205ENST00000530163 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
POLD3-205ENST00000530163 POTEHQ6S545 545 aa10.16□□□□□ -0.78
POLD3-205ENST00000530163 PLCD3Q8N3E9 789 aa10.16□□□□□ -0.78
POLD3-205ENST00000530163 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
POLD3-205ENST00000530163 RTN4Q9NQC3 1192 aaKnown RBP10.11□□□□□ -0.79
POLD3-205ENST00000530163 ZBTB47Q9UFB7 747 aaPredicted RBP10.11□□□□□ -0.79
POLD3-205ENST00000530163 KLHL34Q8N239 644 aa10.09□□□□□ -0.79
POLD3-205ENST00000530163 CREBZFQ9NS37 354 aa10.09□□□□□ -0.79
POLD3-205ENST00000530163 SPOCK2Q92563 424 aa10.07□□□□□ -0.8
POLD3-205ENST00000530163 ZCCHC6Q5VYS8 1495 aaKnown RBP10.05□□□□□ -0.8
POLD3-205ENST00000530163 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
POLD3-205ENST00000530163 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
POLD3-205ENST00000530163 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.8
POLD3-205ENST00000530163 NUBP1P53384 320 aa9.95□□□□□ -0.82
POLD3-205ENST00000530163 PIP4P2Q8N4L2 257 aa9.95□□□□□ -0.82
POLD3-205ENST00000530163 NPM1P06748 294 aaKnown RBP eCLIP9.94□□□□□ -0.82
POLD3-205ENST00000530163 PRKAR2AP13861 404 aaKnown RBP9.94□□□□□ -0.82
POLD3-205ENST00000530163 CHADLQ6NUI6 762 aa9.94□□□□□ -0.82
POLD3-205ENST00000530163 PKD2Q13563 968 aa9.93□□□□□ -0.82
POLD3-205ENST00000530163 FARP1Q9Y4F1 1045 aaPredicted RBP9.93□□□□□ -0.82
POLD3-205ENST00000530163 SLC24A1O60721 1099 aa9.92□□□□□ -0.82
POLD3-205ENST00000530163 DCAF1Q9Y4B6 1507 aa9.91□□□□□ -0.82
POLD3-205ENST00000530163 GSE1Q14687 1217 aa9.87□□□□□ -0.83
POLD3-205ENST00000530163 TRIM41Q8WV44 630 aa9.85□□□□□ -0.83
POLD3-205ENST00000530163 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms