RNA–Protein interactions for RNA: ENST00000529535.1

ARHGAP42-206, Transcript of Rho GTPase activating protein 42, humanhuman

TSL 2

Gene ARHGAP42, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP42-206ENST00000529535 AEBP2Q6ZN18 517 aaPredicted RBP20.64■□□□□ 0.9
ARHGAP42-206ENST00000529535 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
ARHGAP42-206ENST00000529535 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
ARHGAP42-206ENST00000529535 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
ARHGAP42-206ENST00000529535 FOXD1Q16676 465 aa16.49■□□□□ 0.23
ARHGAP42-206ENST00000529535 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
ARHGAP42-206ENST00000529535 MSH5O43196 834 aa15.54■□□□□ 0.08
ARHGAP42-206ENST00000529535 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
ARHGAP42-206ENST00000529535 ADRA2BP18089 450 aa15.33■□□□□ 0.04
ARHGAP42-206ENST00000529535 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
ARHGAP42-206ENST00000529535 POTEDQ86YR6 584 aa15.29■□□□□ 0.04
ARHGAP42-206ENST00000529535 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
ARHGAP42-206ENST00000529535 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
ARHGAP42-206ENST00000529535 DMRT2Q9Y5R5 561 aa14□□□□□ -0.17
ARHGAP42-206ENST00000529535 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
ARHGAP42-206ENST00000529535 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
ARHGAP42-206ENST00000529535 CACNB1Q02641 598 aaPredicted RBP13.47□□□□□ -0.25
ARHGAP42-206ENST00000529535 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.26
ARHGAP42-206ENST00000529535 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
ARHGAP42-206ENST00000529535 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
ARHGAP42-206ENST00000529535 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
ARHGAP42-206ENST00000529535 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
ARHGAP42-206ENST00000529535 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.32
ARHGAP42-206ENST00000529535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.33
ARHGAP42-206ENST00000529535 NPM3O75607 178 aaKnown RBP12.92□□□□□ -0.34
ARHGAP42-206ENST00000529535 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
ARHGAP42-206ENST00000529535 KCNA4P22459 653 aa12.6□□□□□ -0.39
ARHGAP42-206ENST00000529535 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
ARHGAP42-206ENST00000529535 CAPN15O75808 1086 aa12.52□□□□□ -0.41
ARHGAP42-206ENST00000529535 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
ARHGAP42-206ENST00000529535 DSG3P32926 999 aa12.32□□□□□ -0.44
ARHGAP42-206ENST00000529535 APLP2Q06481 763 aa12.32□□□□□ -0.44
ARHGAP42-206ENST00000529535 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
ARHGAP42-206ENST00000529535 TRHP20396 242 aaPredicted RBP12.3□□□□□ -0.44
ARHGAP42-206ENST00000529535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
ARHGAP42-206ENST00000529535 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
ARHGAP42-206ENST00000529535 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.46
ARHGAP42-206ENST00000529535 ABCB7O75027 752 aa12.19□□□□□ -0.46
ARHGAP42-206ENST00000529535 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
ARHGAP42-206ENST00000529535 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
ARHGAP42-206ENST00000529535 POTEHQ6S545 545 aa12□□□□□ -0.49
ARHGAP42-206ENST00000529535 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
ARHGAP42-206ENST00000529535 POLA2Q14181 598 aa11.88□□□□□ -0.51
ARHGAP42-206ENST00000529535 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
ARHGAP42-206ENST00000529535 FOXD4L1Q9NU39 408 aa11.81□□□□□ -0.52
ARHGAP42-206ENST00000529535 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
ARHGAP42-206ENST00000529535 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
ARHGAP42-206ENST00000529535 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
ARHGAP42-206ENST00000529535 ZBTB22O15209 634 aa11.51□□□□□ -0.57
ARHGAP42-206ENST00000529535 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
ARHGAP42-206ENST00000529535 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
ARHGAP42-206ENST00000529535 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
ARHGAP42-206ENST00000529535 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
ARHGAP42-206ENST00000529535 FBLN2P98095 1184 aa11.37□□□□□ -0.59
ARHGAP42-206ENST00000529535 PITPNM1O00562 1244 aa11.28□□□□□ -0.6
ARHGAP42-206ENST00000529535 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
ARHGAP42-206ENST00000529535 SPDYE2BA6NHP3 402 aa11.23□□□□□ -0.61
ARHGAP42-206ENST00000529535 SPDYE6P0CI01 402 aa11.23□□□□□ -0.61
ARHGAP42-206ENST00000529535 SPDYE2Q495Y8 402 aa11.23□□□□□ -0.61
ARHGAP42-206ENST00000529535 NISCHQ9Y2I1 1504 aa11.23□□□□□ -0.61
ARHGAP42-206ENST00000529535 HAX1O00165 279 aa11.22□□□□□ -0.61
ARHGAP42-206ENST00000529535 SP7Q8TDD2 431 aaPredicted RBP11.2□□□□□ -0.62
ARHGAP42-206ENST00000529535 CLEC11AQ9Y240 323 aa11.18□□□□□ -0.62
ARHGAP42-206ENST00000529535 ZNF692Q9BU19 519 aaPredicted RBP11.15□□□□□ -0.62
ARHGAP42-206ENST00000529535 FXR2P51116 673 aaKnown RBP eCLIP11.14□□□□□ -0.63
ARHGAP42-206ENST00000529535 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
ARHGAP42-206ENST00000529535 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
ARHGAP42-206ENST00000529535 PRKAR2AP13861 404 aaKnown RBP11.05□□□□□ -0.64
ARHGAP42-206ENST00000529535 SSUH2Q9Y2M2 353 aa11□□□□□ -0.65
ARHGAP42-206ENST00000529535 PABPN1Q86U42 306 aaKnown RBP eCLIP10.97□□□□□ -0.65
ARHGAP42-206ENST00000529535 PRR29P0C7W0 189 aa10.93□□□□□ -0.66
ARHGAP42-206ENST00000529535 CSRNP3Q8WYN3 585 aa10.92□□□□□ -0.66
ARHGAP42-206ENST00000529535 EVX2Q03828 476 aa10.91□□□□□ -0.66
ARHGAP42-206ENST00000529535 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.66
ARHGAP42-206ENST00000529535 CHADLQ6NUI6 762 aa10.89□□□□□ -0.67
ARHGAP42-206ENST00000529535 C19orf67A6NJJ6 358 aa10.81□□□□□ -0.68
ARHGAP42-206ENST00000529535 GABBR2O75899 941 aa10.72□□□□□ -0.69
ARHGAP42-206ENST00000529535 CD44P16070 742 aaKnown RBP10.7□□□□□ -0.7
ARHGAP42-206ENST00000529535 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
ARHGAP42-206ENST00000529535 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.71
ARHGAP42-206ENST00000529535 STAG3Q9UJ98 1225 aa10.65□□□□□ -0.71
ARHGAP42-206ENST00000529535 ZRANB1Q9UGI0 708 aa10.55□□□□□ -0.72
ARHGAP42-206ENST00000529535 LHX8Q68G74 356 aa10.53□□□□□ -0.72
ARHGAP42-206ENST00000529535 DCBLD2Q96PD2 775 aa10.53□□□□□ -0.72
ARHGAP42-206ENST00000529535 CREBZFQ9NS37 354 aa10.52□□□□□ -0.73
ARHGAP42-206ENST00000529535 PAK3O75914 559 aaPredicted RBP10.51□□□□□ -0.73
ARHGAP42-206ENST00000529535 CLCN6P51797 869 aa10.5□□□□□ -0.73
ARHGAP42-206ENST00000529535 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
ARHGAP42-206ENST00000529535 ZNF579Q8NAF0 562 aaKnown RBP10.44□□□□□ -0.74
ARHGAP42-206ENST00000529535 POTEIP0CG38 1075 aa10.4□□□□□ -0.74
ARHGAP42-206ENST00000529535 GALR2O43603 387 aaPredicted RBP10.35□□□□□ -0.75
ARHGAP42-206ENST00000529535 PHF12Q96QT6 1004 aa10.35□□□□□ -0.75
ARHGAP42-206ENST00000529535 PLEKHG5O94827 1062 aa10.3□□□□□ -0.76
ARHGAP42-206ENST00000529535 TSPYL2Q9H2G4 693 aaPredicted RBP10.27□□□□□ -0.77
ARHGAP42-206ENST00000529535 MNX1P50219 401 aaPredicted RBP10.26□□□□□ -0.77
ARHGAP42-206ENST00000529535 MIER1Q8N108 512 aa10.23□□□□□ -0.77
ARHGAP42-206ENST00000529535 MS4A3Q96HJ5 214 aa10.19□□□□□ -0.78
ARHGAP42-206ENST00000529535 PROM2Q8N271 834 aa10.18□□□□□ -0.78
ARHGAP42-206ENST00000529535 PLCD3Q8N3E9 789 aa10.17□□□□□ -0.78
ARHGAP42-206ENST00000529535 SLC24A1O60721 1099 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms