RNA–Protein interactions for RNA: ENST00000528678.1

CCDC180-209, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 689 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-209ENST00000528678 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
CCDC180-209ENST00000528678 CHIC1Q5VXU3 224 aa22.87■■□□□ 1.25
CCDC180-209ENST00000528678 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
CCDC180-209ENST00000528678 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
CCDC180-209ENST00000528678 FOXD1Q16676 465 aa18.84■□□□□ 0.61
CCDC180-209ENST00000528678 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.53
CCDC180-209ENST00000528678 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
CCDC180-209ENST00000528678 ADRA2BP18089 450 aa17.86■□□□□ 0.45
CCDC180-209ENST00000528678 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
CCDC180-209ENST00000528678 MSH5O43196 834 aa17.41■□□□□ 0.38
CCDC180-209ENST00000528678 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
CCDC180-209ENST00000528678 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
CCDC180-209ENST00000528678 SCAF1Q9H7N4 1312 aaKnown RBP16.22■□□□□ 0.19
CCDC180-209ENST00000528678 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
CCDC180-209ENST00000528678 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
CCDC180-209ENST00000528678 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
CCDC180-209ENST00000528678 HOXD11P31277 338 aaPredicted RBP15.61■□□□□ 0.09
CCDC180-209ENST00000528678 NCBP3Q53F19 620 aaKnown RBP15.61■□□□□ 0.09
CCDC180-209ENST00000528678 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
CCDC180-209ENST00000528678 KCNA4P22459 653 aa15.47■□□□□ 0.07
CCDC180-209ENST00000528678 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
CCDC180-209ENST00000528678 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
CCDC180-209ENST00000528678 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
CCDC180-209ENST00000528678 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
CCDC180-209ENST00000528678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCDC180-209ENST00000528678 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
CCDC180-209ENST00000528678 SLC4A2P04920 1241 aa14.71□□□□□ -0.05
CCDC180-209ENST00000528678 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
CCDC180-209ENST00000528678 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
CCDC180-209ENST00000528678 U3KPZ7 1027 aaPredicted RBP14.62□□□□□ -0.07
CCDC180-209ENST00000528678 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
CCDC180-209ENST00000528678 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
CCDC180-209ENST00000528678 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
CCDC180-209ENST00000528678 ZBTB22O15209 634 aa14.26□□□□□ -0.13
CCDC180-209ENST00000528678 CAPN15O75808 1086 aa14.25□□□□□ -0.13
CCDC180-209ENST00000528678 MYCNP04198 464 aaPredicted RBP14.23□□□□□ -0.13
CCDC180-209ENST00000528678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
CCDC180-209ENST00000528678 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
CCDC180-209ENST00000528678 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
CCDC180-209ENST00000528678 TRHP20396 242 aaPredicted RBP14.12□□□□□ -0.15
CCDC180-209ENST00000528678 DSG3P32926 999 aa14.12□□□□□ -0.15
CCDC180-209ENST00000528678 APLP2Q06481 763 aa14.12□□□□□ -0.15
CCDC180-209ENST00000528678 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
CCDC180-209ENST00000528678 ATF5Q9Y2D1 282 aaPredicted RBP14□□□□□ -0.17
CCDC180-209ENST00000528678 ABCB7O75027 752 aa13.99□□□□□ -0.17
CCDC180-209ENST00000528678 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
CCDC180-209ENST00000528678 POLA2Q14181 598 aa13.82□□□□□ -0.2
CCDC180-209ENST00000528678 ATXN8OSP0DMR3 200 aa13.78□□□□□ -0.2
CCDC180-209ENST00000528678 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
CCDC180-209ENST00000528678 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
CCDC180-209ENST00000528678 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
CCDC180-209ENST00000528678 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
CCDC180-209ENST00000528678 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
CCDC180-209ENST00000528678 FBLN2P98095 1184 aa13.3□□□□□ -0.28
CCDC180-209ENST00000528678 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
CCDC180-209ENST00000528678 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
CCDC180-209ENST00000528678 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
CCDC180-209ENST00000528678 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
CCDC180-209ENST00000528678 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
CCDC180-209ENST00000528678 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
CCDC180-209ENST00000528678 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
CCDC180-209ENST00000528678 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
CCDC180-209ENST00000528678 POTEHQ6S545 545 aa13□□□□□ -0.33
CCDC180-209ENST00000528678 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
CCDC180-209ENST00000528678 NISCHQ9Y2I1 1504 aa12.98□□□□□ -0.33
CCDC180-209ENST00000528678 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
CCDC180-209ENST00000528678 RTN4Q9NQC3 1192 aaKnown RBP12.93□□□□□ -0.34
CCDC180-209ENST00000528678 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC180-209ENST00000528678 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
CCDC180-209ENST00000528678 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
CCDC180-209ENST00000528678 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
CCDC180-209ENST00000528678 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
CCDC180-209ENST00000528678 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC180-209ENST00000528678 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
CCDC180-209ENST00000528678 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
CCDC180-209ENST00000528678 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
CCDC180-209ENST00000528678 PROM2Q8N271 834 aa12.57□□□□□ -0.4
CCDC180-209ENST00000528678 FKBP8Q14318 412 aa12.53□□□□□ -0.4
CCDC180-209ENST00000528678 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
CCDC180-209ENST00000528678 HAX1O00165 279 aa12.47□□□□□ -0.41
CCDC180-209ENST00000528678 EVX2Q03828 476 aa12.43□□□□□ -0.42
CCDC180-209ENST00000528678 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
CCDC180-209ENST00000528678 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
CCDC180-209ENST00000528678 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
CCDC180-209ENST00000528678 SP7Q8TDD2 431 aaPredicted RBP12.32□□□□□ -0.44
CCDC180-209ENST00000528678 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
CCDC180-209ENST00000528678 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
CCDC180-209ENST00000528678 MIER1Q8N108 512 aa12.21□□□□□ -0.45
CCDC180-209ENST00000528678 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC180-209ENST00000528678 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
CCDC180-209ENST00000528678 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
CCDC180-209ENST00000528678 GABBR2O75899 941 aa12.1□□□□□ -0.47
CCDC180-209ENST00000528678 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
CCDC180-209ENST00000528678 PLEKHG5O94827 1062 aa12.07□□□□□ -0.48
CCDC180-209ENST00000528678 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
CCDC180-209ENST00000528678 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
CCDC180-209ENST00000528678 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
CCDC180-209ENST00000528678 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
CCDC180-209ENST00000528678 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
CCDC180-209ENST00000528678 PHF12Q96QT6 1004 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms